Oryzias latipes (Japanese medaka): 101169841
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Entry
101169841 CDS
T02443
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101169841
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101169841
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
Spem1
GPHH
IQ
IQCJ-SCHIP1
ATP-synt_B
Zip
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
101169841
NCBI-ProteinID:
XP_004066709
LinkDB
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Position
2:15906782..15952208
Genome browser
AA seq
2009 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEKAKRPRTERDSDDENGPRPNSDLEAGKSL
PFIYGDIPPHMVSTPLEDIDPFYSNQKTFIVLNRGKAIFRFNATSALYILTPFNPLRRIA
IRVLVHSMFSILIMFTILTNCAFMTLSSPPDWAKNVEYTFTGIYTFESLIKILARGFCLG
KFTFLQDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRRPTNATNSSANLNDTMYYNGSF
NMENSTFNWTEYINDESNYYYLPGRRDALLCGNGSGAGLCPEGFDCIKGGRNPDYGYTSF
DTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMA
YDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSGRGDPTSESSSGT
SKLSSKSAKERRNRRKKRKQREEEEEREGRDKFHKSKSEDSIKRSTFRFSIDANRLSYEK
RCSSPNQSLLSVRGSIFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEEGDSRRGS
LFLPRRTERRCSVVSQTSLGAPRIMLPANGKMHCTVDCNGVVSLVGGTSVTTSPVGLLQP
EGTTTDTELKKRRSGFHQPSMDYLNEPGARQRALSVASILTNTMEELEESRQKCPPCWYR
FANKCLIWDCCPAWLKIKEVVSTVVMDPFVDLTITICIVLNTLFMAMEHYPMTNEFDNVL
SVGNLVFTGIFTAEMCLKIIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEGLSVLRS
FRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEFK
CKISQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGN
LVVLNLFLALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGIAFVKKKVRQLLRSLCFC
GGGKGSGLVEESKPLDELHSNGKGNCISNHTSLEITKDGTGVYMMEGNGRPGGGLVVSVG
GDTPGKYPVEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLDV
EPQPLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEACFTEGCVSRFQCCQIDEEANNFK
SWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDVYIEQRRTIKTVLEYADKVFTYV
FILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALR
PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCINTTTE
EMFPIDIVNNKSQCLLLVNDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDS
RDLEDQPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANAFQGCVFDCITKQAFDIVIMILICLNMVTMMVETDD
QTKEMDKILYWINLVFIVLFTGECVLKIISLRHYYFTIGWNIFDFVVVILSIVGMFLSEV
IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVKKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSQ
LEHPGNNYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDD
FEMFYEVWERFDPDATQFVEYCKLSDFADALDPPLRIPKPNMIQLVSMDLPMVSGERIHC
LDILFAFTKRVLGEGGEMDVLRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAIIIQR
AFRHYLIRQAMKKASAMYKEKLKNSMRDPDKDVMVISKFNETSTSDKTDMTPSTASPPSY
NSVTKSDKDKYEKENREKENKGKDLTDKK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccgtcccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggagaaggccaagagaccacggacggagcgc
gacagcgacgatgaaaacgggcccaggcccaacagcgacctggaggcggggaaatccctg
cccttcatctacggggacatccctccgcacatggtgtcaaccccgctggaggacattgac
cccttttacagcaatcagaagaccttcatagtgttgaatcgtgggaaggcgatcttccgt
ttcaatgccacttctgccttgtacatcctaactcccttcaaccctctgcgaaggatagct
attagagttttggtgcactcgatgttcagcatattgatcatgttcaccatcttgaccaac
tgtgcttttatgacgctaagttctcccccggactgggccaagaatgtagagtacacattc
acagggatttacaccttcgagtcccttataaagatccttgccaggggcttttgtctgggg
aagttcacgttcctgcaggacccttggaactggctggatttcagtgttattctcatggca
tatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagggttctg
cgagctctgaaaacaatatcagtcatcccagggttgaagaccatcgttggagctctgatc
cagtctgtgaagaagctgtcagacgtgatgattctcaccgtgttctgcctcagcgtcttc
gccctgatcggcctgcagctctttatgggcaacctgaggcagaagtgtgtgcgcaggccc
actaacgccaccaacagcagcgccaacttaaacgacaccatgtactacaacggcagcttc
aacatggagaactccaccttcaactggacggagtacatcaacgatgaaagtaattactat
tacctccctggccgaagggatgctttactctgtggaaatggcagtggtgcaggactttgt
ccagaaggctttgactgcatcaaagggggtcgtaatccagactatggctacacgagtttc
gacaccttcagctgggcttttctctcccttttccggctaatgacccaagacttctgggaa
aacctctaccaacagactttacgagcagcggggaagccctacatgattttctttgtactg
gtgatattcctgggctctttctaccttgtcaacctgattctggctgtggtagccatggct
tacgacgaacaaaaccaggcgaccattgaggaggctcagcagaaggaggaggagtttcag
gccatgctggagcagctgaagaggcagcaggaagaggcgcaggttgccgcggcagcagcc
accgagagcggcgagtacagcggtagaggggaccccacctccgagtcctcctcggggacg
tcaaagctgagctccaagagtgccaaggagcgccgcaacaggcggaagaagaggaagcag
agggaggaggaggaggagagggagggccgcgacaagttccacaagtcaaagtctgaggac
agcatcaagaggtccaccttccgcttctccattgatgccaacaggctgtcttatgagaaa
agatgctcatccccaaaccagtcactactaagtgtccgtggctccatcttctcacctcgg
aggaacagtcgggccagcctcttcagcttccgtggaagagcgcgggatatgggctcagag
aacgacttcgcagacgacgagcacagcacgttcgaggaaggcgacagtcgtcggggctcc
ttgttcttgccacgccgcaccgaacgccgttgcagtgttgtcagccagaccagcctcggg
gcaccgcggatcatgttacctgccaacggcaagatgcactgcaccgtagactgcaacggg
gtggtgtcactggtcggcggaacgtctgtcacaacttctcctgtaggtcttctgcaacct
gaggggacaacaacagatacagaattgaaaaagcgaagatcaggttttcatcagccgtct
atggactatttaaacgaacctggagcccgacagagagccttgagcgtggctagcatcctt
actaacaccatggaagagctggaggagtcgagacagaaatgcccaccttgctggtataga
tttgcaaacaagtgtctgatctgggattgctgtcctgcatggttaaagatcaaggaggtg
gtcagcacggtggtcatggacccatttgtggatctgaccatcacaatttgcattgtcctc
aacaccctgttcatggcgatggagcattaccccatgaccaatgagtttgacaatgtgctg
tcagtcggaaacctggtgttcactggcatcttcacagcagagatgtgcctcaaaattatt
gctctggatccttactactacttccagcagggctggaacatcttcgatggcattattgtc
agcctcagtcttatggaattgggcttggcaaatgtagaaggcctgtcagtgctcaggtcc
tttcgattgctaagggttttcaagctggccaagtcatggcccactctgaacatgctcatc
aagatcatcggaaactctgttggcgctctgggcaacctgactctcgtcttggctataatt
gtgttcatctttgctgtggtgggcatgcaactgtttggcaagagctacaaagagttcaaa
tgcaaaatatcccaagactgcgagcttccgcgctggcacatgcacgacttcttccactcc
tttctcattgtgttccgggtgctgtgtggagagtggatagagacaatgtgggactgcatg
gaggtggctggacagacgatgtgtctgatcgtcttcatgatggtcatggtcattggaaac
cttgtggttctgaacctgttcttggctctcctcctgagctcattcagtgctgataacctg
gctgcaacagacgaggacagtgagatgaacaacctgcagatcgctgtaggccgcattcag
aggggaattgcgtttgtcaaaaaaaaggtgcggcagttgctgcggagcctgtgtttttgt
ggcggtggtaaaggctcgggcttggtggaggagagcaaacctctggatgagctgcacagc
aacggcaaaggcaactgcatttctaaccacacctcactagagatcaccaaagacgggact
ggagtgtacatgatggaagggaatgggaggccaggaggaggcctggtggttagtgttggt
ggggacactcctgggaagtacccagtggaggaatgtgactacatgtccttcattcacaac
ccaagcctcacggtcactgtgccgatcgcagtgggcgagtcagactttgagaacttaaat
acagaggatttcagcagcgactcatctgatgtggagggcagcaaagagaagcttgatgtg
gaaccccagcctctgagttcttcagaggggagcacagttgatatcagacccccaggagat
ggggttgattcagtggagttggagccagaggagtcgttggacccagaggcctgctttaca
gaaggctgtgtaagccgatttcagtgctgccagatcgatgaggaagcaaacaattttaag
agctggtggacactcaggaaaacctgcttcatcatagtggagcacaactggttcgaatct
ttcattatcttcatgattctgcttagtagtggagctctggcatttgaggatgtctatatt
gagcaaagacgaaccataaaaacagtgctggagtatgcagacaaagtcttcacatatgtc
ttcatattggaaatgctgttgaagtgggtggcgtatggatttgttaagtactttaccaat
gcttggtgttggctggacttcctcattgtagatgtgtccttggtcagccttgtggcaaat
gccctgggttactctgagctcagcgccatcaaatctctgcggacactacgagctctccgg
cccctcagggccctgtctcggtttgagggcatgagggtggtggtgaatgccctactggga
gccatcccctccatcatgaacgtgctcctggtctgcctcattttctggctcatcttcagc
atcatgggtgtaaatttgtttgccggaaaatactaccactgtatcaacaccactacagag
gaaatgttccccatcgacatcgtcaacaacaagtcacagtgcctgctgctggtcaacgat
agtgctcgctggaaaaatgttaaaatcaactttgacaatgtgggagccggttatctcgct
ttgttgcaagtggcaacatttaagggatggatggacatcatgtatgcagctgttgactct
agagatttggaggatcagcctcagtatgaagtgaacctgtacatgtacctctacttcgtc
attttcatcatctttggctccttctttaccctcaacctcttcattggtgtcatcatcgac
aactttaaccagcaaaagaagaagttgggaggtcaggacatctttatgacagaagaacag
aagaaatattacaacgctatgaagaagctgggttccaagaaaccacaaaaacctattcct
cgtccagcaaacgcattccaaggctgtgtgtttgactgcatcacaaaacaggcctttgac
attgtgattatgatacttatttgccttaatatggtgactatgatggttgagacagatgac
cagacgaaggagatggacaagatcctctactggatcaacctggttttcattgtgctcttt
actggggaatgtgttctcaaaataatctctctgcggcactattactttaccattggctgg
aacatctttgattttgtggtggtgattctttcgattgtaggtatgtttttatccgaagtc
atcgagaagtactttgtgtccccaaccctgtttcgagtgatccgactagcacggattggt
cggatcctccgcttgattaaaggcgccaagggcattcggacgcttctctttgccttgatg
atgtcccttcctgccctgtttaacataggccttcttcttttcctggtcatgttcatctat
gccatctttgggatgtccaactttgcatacgtgaaaaaagaatcaggaatcgacgacatg
ttcaattttgagaccttcgggaacagtatgatctgcttgtttcagatcaccacctctgct
ggttgggatggccttcttgctccaatactgaacaaaagggaacctgactgtgacagccaa
ctggagcacccaggcaacaactacaaaggcaactgtgggaacccatcagtcggcatattt
ttttttgtcagctacatcatcatttgctttctcatagtggtcaacatgtacattgctgtt
atcctggagaacttcagtgtggccacagaggagagcgcagagcctctaagtgaggatgat
ttcgaaatgttttatgaggtgtgggaacgctttgatccagacgccacacagtttgtggag
tactgtaagctctctgactttgcagatgctctagacccaccactgcggatacccaagcct
aacatgattcagctggtttcaatggatctgccaatggtaagtggtgaacggatccactgc
ctcgacatcctttttgctttcaccaagagagttttgggtgaagggggtgagatggacgtg
ttacgagggcagatggaagatcgcttcatggcttccaacccatcgaaggtgtcttacgaa
cccatcaccaccacgctgcgtcgcaagcaagaggaaatgtcggccataatcatccagaga
gccttccgccactacctgatccgccaggccatgaaaaaggcctctgccatgtacaaggag
aagctgaagaacagcatgcgagatccagacaaagacgtgatggtcataagcaagtttaac
gagacctccacatctgataaaacagacatgacgccttctacggcttccccgccctcctac
aacagcgtgaccaagtctgacaaggacaaatatgaaaaagaaaatagagaaaaagaaaac
aaaggaaaagacttgacagacaaaaagtaa
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