Oryzias latipes (Japanese medaka): 101170174 Help Entry 101170174         CDS       T02443                                  Symbol pbrm1 Name (RefSeq) protein polybromo-1   KO K11757   protein polybromo-1 Organism ola  Oryzias latipes (Japanese medaka) Pathway ola03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ola00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     101170174 (pbrm1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ola03021]     101170174 (pbrm1)    03036 Chromosome and associated proteins [BR:ola03036]     101170174 (pbrm1) Transcription machinery [BR:ola03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      101170174 (pbrm1) Chromosome and associated proteins [BR:ola03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     101170174 (pbrm1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 Motif Other DBs NCBI-GeneID:  101170174 NCBI-ProteinID:  XP_011472940 LinkDB All DBs Position 5:2530831..2550331 Genome browser AA seq 1631 aa AA seqDB search MALKRKRALSPSSSVSGGDFEDSQTSVASGPGRKRRRTSNIPTVDPIAVCHELYNTVRDY KDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVDQLTSDFQLLF NNTKMYYKTDSPEYRAACKLWDLYLRTKNEFVQRGEYEEEDEGGYEAPENPGGSTEDETT PSCLKDVLEQLLDAVVSYTEPTGRLVSELFQKLPSKMQYPDYYAVIKEPIDLKTIAQKIQ LGHYRSCAAMAKDIDLLVKNAKAYNEPGSQVFKDANTIKKIFAQKKSELEHGEPVKSSIR IRNRKSTQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAESMTSNMDMSNPIFQLYE AVRGARNSQGQLISEPFLQLPSRKDYPDYYHQISQPICLQQIKSKMKNNEYASVEHVDSD LTLMFENAKRYNVPHSSIYKRALKLQHIQQLKRKELLQREDDDGDSMLSSATSDTSTTKR KSHKKNTKKNRMKALVAAVTEAREAGVGRRLCDLFMVKPSKKDYPDYYKIILEPMDLRTI EHNIRSDKYLTEDSMVADMKLMFRNARHYNEEGSQVYNDADILEKIMEDRRRDLGPATDE DDTMSPKLKIRKNSINLKKSKYLSPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAE LPDYYIAIKKPVDMEKIKSHMLANKYQDVDALVEDFVLMFNNACTYNEPESLIYRDALLL HKVLLETRRDLEGGEDTHVPDVPRLIQELVRSLFVSVLGHQDDEGRCYSDSLAEIPAADP ANSEKPLLNFEIIRKNVDRSRYRRLDVFQDHMFEVLEKARRLSRTDSEIFEDAVELQQFF IKIRDELCKNGEILMSPALSYTSKHLHSDVDKEKKEKLPKEYEEDRIKREEEKKEAEKRE DPVVASWPVQRTYSQDCSFKDSMYHVGDCVYVEPAESNLQPHIICIERLWQDDTGEKWLY GCWFYRPNETFHLATRKFLEKEVFKSDYYNKTPISKILGKCVVMFVKEYFKLYPEGFQEE DVYVCESRYSAKSKSFKKIKMWTMPLNSVRFTPREVPLPVVRVASIFATKPDEKPPETED ESKMTDGVIEKEREDVPLDFTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHRVGR IEKMWIRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCIIGKCVVLSF KEFLSCRPTEVPEDDVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLIVPQ KEPSPLLNRKIEKLEAKFADMTDEELEELGDDDGELGDQSHMQSSMSGDLDLLSYTPPQS TPKSIKGLSKKEGSKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSRLVGTEWRNLETS RKAEYEERAAKVAEQQERDRTQHQTFLKSGTPVGALMGVVPPPTPMGLLNPGMTPVSDMG AYRSAMMPLQARAEGLVSMTGMPLHHMGMPLYPQRLLPKVPGFRGMPSFGVSGTGSGSAA GNVHGPQIALMGSGLQAPPPYPGQGGGHPALQQPSTPLFVSPPARTQRLLHSEAYLRYIE GLSAESSSVSKWDQALKVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALWRLRDMMLR DTLNICQTYHL NT seq 4896 nt NT seq  +upstreamnt  +downstreamnt atggctttgaaaaggaaacgagccttgtccccctcaagcagcgtgagtggaggagatttt gaggatagccagacttctgtggcgtctggccccgggagaaagaggagaaggacttcaaac attccaaccgttgatccgattgctgtctgccatgaactgtacaacacagtcagagattat aaagatgatcagggccgaatgttgtgtgagctcttcatcagagcccctaaaagaaggaat caaccggattactaccacgttgtgtctcagcctattgacatgatgaagatccagcagaag ttaaagatggaggagtatgatgatgtcgatcaactgaccagtgacttccaactcctgttt aacaacacaaagatgtattataagacggacagtcctgaatatagagcagcctgtaagctg tgggacctttacctgcgaaccaaaaacgagtttgttcaacgaggcgaatacgaagaggaa gatgaaggaggatacgaggccccggagaatccaggaggctcaactgaagatgagacgaca ccttcctgcttaaaggatgtcctagagcagcttcttgatgctgtcgtgtcttataccgaa ccaacgggacgcctagtcagtgagctgttccagaagcttccctccaaaatgcaatatcca gactattacgccgtcatcaaagaaccgatagatctgaaaaccatcgctcagaagatccag ttgggtcactacaggagttgtgctgccatggcaaaagacatagacttgttggtgaagaac gctaaagcgtacaatgagccggggtcacaggtttttaaggacgctaacacgattaaaaag atttttgcacagaagaagtctgagctggagcacggggaacctgtcaaatccagcatccgc atcaggaatagaaagtcaactcaaggggatcgcctctccgccatcaccatggcacttcag tatgagagtgacgaggagggaatactatctggctctgtccactatgatgagggggaatct gaagcggagagcatgacatcaaacatggacatgagcaaccccatcttccagctttacgaa gccgtgcgaggagccaggaacagtcagggccaactgatttccgagcctttcctgcagctg ccctccaggaaagactatcctgactactaccaccagatcagtcagcccatctgcctgcaa cagatcaagagcaagatgaagaacaacgagtatgcgagcgtggagcacgtcgactcagat ctgacgttgatgtttgagaacgccaaacgctataatgttcctcactcctccatctacaag cgtgcgctcaaactccagcacattcagcagctgaagaggaaggaacttttacagagagag gatgatgatggtgacagcatgctctcctcagccacgtctgacaccagtactacgaaaaga aaaagtcataagaagaataccaaaaagaatcgcatgaaggctctggtagctgctgtgact gaggcgcgagaggccggcgttggtcgtagactgtgtgacctcttcatggtgaagccctca aagaaggactaccccgactattacaaaattatcctggagcccatggacctgaggaccatc gagcacaacattcgctcagacaagtatctgaccgaggactctatggtggcagatatgaag ctgatgttccgcaatgctcggcactacaatgaggaaggctcacaggtctacaatgatgca gacatcctagagaagatcatggaggacaggcgcagagatctcggaccagcaactgatgaa gacgacaccatgtcccccaagttaaaaataagaaagaacagcatcaatctgaagaaatca aagtacttgagtcccttacagcagaaactcaatgagctttacgaagctgtcaagaactac acagacaaacgaggtcgccgactcagcaccatcttcctgagacttccatctcgcgctgag ctccccgattactatatcgccattaagaaaccggtggacatggagaagatcaagagccac atgctggctaacaagtaccaggatgttgatgctctggttgaggactttgtgctgatgttt aacaacgcctgcacctacaacgagccagagtctctgatttaccgagacgctctcttgctg cacaaagtgttgttggagaccaggcgggatctggaaggaggagaggacacccacgtgccg gacgtgccccgcctcatccaggagcttgttcgcagcctctttgtatctgttcttggtcac caagacgatgaggggcgatgctacagcgattctctggcagagattcctgctgctgatcca gcaaactctgagaaacctctgcttaattttgagatcatcagaaaaaatgtggaccggagt cgctacaggaggctggatgtttttcaggaccacatgtttgaggttctagagaaagccaga cggttaagcaggacagattcagagatctttgaagatgcagtggagctgcagcagttcttc atcaaaatccgagatgagctgtgcaagaatggagagatcttgatgtcccctgccctcagc tatactagtaaacatttgcatagtgatgtagacaaggaaaagaaagagaaacttcccaaa gagtacgaggaagacagaatcaagagagaagaagaaaaaaaagaggcagaaaagagggag gacccagtagtagcatcgtggcccgttcagcgtacatacagccaggactgctccttcaag gatagtatgtaccatgtgggggactgcgtctatgtcgagcctgcagagtcgaacctacag ccacacataatctgtattgagcgtctctggcaggatgacaccggggagaagtggttgtat ggatgctggttctatcgaccaaatgaaacgtttcatttggccacaagaaaattcttggag aaggaagttttcaagagcgattactacaacaaaactcccatcagcaaaattctgggaaag tgtgttgttatgttcgtaaaggagtacttcaagctctacccagaaggtttccaggaagag gatgtgtacgtctgtgaatcgcgttactctgctaagtctaagtccttcaagaagatcaag atgtggaccatgcctctgaactcagttcggttcactcctcgagaagtaccccttcctgtg gttcgtgtagcttccatatttgccactaaaccagatgagaagccaccggagacggaagac gagagcaaaatgacagatggggtcatagagaaggagagggaggacgttcctttggatttc accaacggagagccaggctgtcagtactacgagcagctgtgctacaacaacctgtggctg aaagtgggagactgtgtttacattggttctcatggactggtgcgtcaccgagtgggcaga attgagaagatgtggatccgagatggagcgggttacttctttggcccaatttttatccat cctgaagagacggagcacgaacccaccaagatgttctacaagaaggaagtgttccttagc aacctggaggagacttgtccaatgacctgcatcataggaaagtgtgtcgttttgtccttc aaagagttcctgtcatgtcggcccactgaagtgcccgaagatgatgttctgctttgtgag agtcgctacattgaaagtgaaaaacagatgaagaagttcaagggtctgaagcgtttctcg ctctctggaaaggtggtagaggatgaaatctattattttaggaagctcatagttcctcag aaagaaccctcaccgctgctcaatcggaagatcgagaagctggaggctaaatttgctgac atgaccgatgaagaacttgaagaacttggggatgatgacggcgagctgggcgaccagtct cacatgcagtcctccatgtctggtgacctggatctgctgtcctacacgcctccacagtcc acccctaaatccataaaggggctgtcaaaaaaggagggatcgaagcgaaagatcaacatg agtggatacatcctgttcagcagcgagatgcgggctgtcatcaaagctcagcacccagac ttctcctttggggagttgagccggctggttggcacggagtggaggaacctggagacttcc aggaaagcagagtacgaggagcgagcagctaaagtagcagagcagcaggagcgtgacagg acccagcatcagaccttccttaaatcaggtaccccagtaggggcactgatgggggtggtg cctcccccgacccccatgggattgcttaatcctggcatgacgcctgtgtcagatatgggt gcatatagatcagctatgatgcccctgcaggcccgtgctgaaggcctggttagtatgacc ggcatgccactgcatcacatggggatgcctctttatccccaacgtctcctgcccaaagtg cctgggttccgtggaatgccatcctttggtgtcagtggtacaggaagtggatctgcggca ggaaatgttcacggacctcagattgctttgatgggctccgggctccaggctcccccgccg tacccaggacaaggcggaggacatcctgctcttcagcagccctccacacccttgtttgtc tccccaccagctagaactcagcggctgctgcactctgaggcttatctcagatacatagaa ggtctttctgcagagtcttcctctgttagcaagtgggaccaagctctaaaagttcagaaa caagatgtgcgtcttactaaggagcaagagagtagactcccatcccactggctgaagagt aagggagctcacaagactatggcggatgcactttggcggcttcgtgacatgatgctgcga gacaccttaaacatatgtcagacgtatcacctgtag

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