Oryzias latipes (Japanese medaka): 101174618
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Entry
101174618 CDS
T02443
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101174618 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101174618 (herc4)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101174618 (herc4)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101174618 (herc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
LAIKA
Motif
Other DBs
NCBI-GeneID:
101174618
NCBI-ProteinID:
XP_011483069
UniProt:
H2MEV6
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All DBs
Position
15:29771156..29785014
Genome browser
AA seq
1061 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNN
FEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV
PQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALR
SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIA
CGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGPWASSSASSDSDAGEAA
DTGAPSGPDIGESCVVNRIYAGGDQSFAHYSSSSNEQMMESDRIQGLHRRICTVNEDVLQ
TWLNQPAGRLPLEMSKEIDLIFSSASCINGSFLSSSHPDHFSTSSKCSGVDMNTARLLLH
KVTQKEHREISEQVAASLEKNLIPRLSPSPPDIEALRLYLTLPESPLFWDRNNFVTITIP
FAKSVVSLKEAPLKVLGNWWSTLEPPVFQRLVDLYRDVVLYLLQMHKVGIPSVESRIFTC
FLDTSLRLLELLHKVNERAGQIIRYDKFYIHELDELIDIRHDYVTWIQRQMYPLGHDGVV
TLCKYPFVFDAQAKTTLLQTDAVIQMQMAVDQAQLQNFSSMFMPAVESVNPCLILIVRRE
NIVGDTMEVLRKSKNVDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMKELLDPKYGMFRYH
EDSRLIWFSNKTFEDIDLFNLIGLICGLAIYNLTIVELHFPLALYKKLLKKKPTLDDLKE
LMPDVGRSLQQLLDYTEDDVEETFCLNFTITEENYGATEVHELVPNGEELSVNKGNRQDF
VNAYVDYVFNSSVASLFECFYSGFHKVCGGKVLELFQPSELQAMVIGNTNYDWTELEKST
EYKGEYWAEHPTIKLFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGE
QFLPVAHTCFNLLDLPKYTSPEALREKLLQAIDHNRGFNLA
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctggggaaacgcctcctacggtcagctcggcttgggagggattgacgaagag
attgtggtggagccgcgaaaatgtgaattcttccacgggaagcgggtgcgggacgtgggg
tgtgggcgcagacacaccgctttcctgctggaggacgggaccgtgtacacctgcggctgc
aacgacctggggcagctgggacacgagaagtccaggaagaaaccagaacaagtggtggcc
ctggacgcgcagatcatcgtggctctgtcgtgcggggagtctcacacgctcgctctgaac
gataaaggacaggtgttctcctggggtctcggctcggatggacagctgggtttaaataac
tttgaagaatgtattcgagtacccaggaacatcaagagtttgtcagatgttcaggtggct
caggtagcctgtgggtactggcactcgctggctctgtccaaagggggccacatcttctct
tggggtcagaaccgatacggtcaacttgggcttggaatgaccggacagagcatctccgtg
cctcagcacctccagtctctgcagggcattcctttcgctcagatagcagcagggggcgct
cacagcttcgccctgacgctctcaggagccgtgtttggctggggccgcaacaagtttggc
cagctgggtctgaacgacaccaacgatcgctgtttccctgctctgctgaaggccctgaga
tctcagagagtgatctacatcagctgtggggaggatcacaccgcggctctgaccaaggaa
ggaggagtcttcacctttggagcggggggttacggccaacttgggcacaactccacaaac
cacgaggtcaatcccagaaaggtgtttgagctcatgggaaatgtagtcactcagatagcg
tgtggaaggcagcacacgctggccttcaccccctcctcggggaagatggactccttcggt
ctgggagggaacgggcagctcggcacgcgctctacctgtaacaggaaaagccccgccccc
gttaaaggtccatgggcgtcttccagtgcttcatccgattcagacgccggcgaggccgca
gacactggcgccccctctggaccagacattggggagagctgcgtggtcaacaggatttat
gcaggaggagaccagagttttgctcactatagcagctccagtaacgagcagatgatggag
tctgacaggattcagggtctccacaggaggatctgcaccgtaaacgaagacgtgcttcag
acgtggctcaaccaaccagcaggaagactcccgctcgaaatgtcaaaggagatcgacctg
attttttcctctgccagctgcatcaacggatccttcctgtcaagcagccatccggatcac
ttcagtaccagcagcaaatgctctggagtggacatgaacacggctcgcctgctgctccac
aaagtcacccagaaagagcatcgcgagatcagcgagcaggtagctgccagtctggagaag
aacctgatccccagactcagtccttctcctccggacatcgaagccctcagactgtacctc
acccttccagagagtcctctcttctgggaccgaaacaactttgtcaccatcaccataccg
tttgccaaaagtgttgtgagtctgaaagaggcgccgctgaaggttctaggaaactggtgg
tcgaccttggagccccccgtgtttcagcgcttggtagatttataccgggacgtggtgttg
taccttctccagatgcacaaagttgggattccctcggtagagtccaggatcttcacctgc
ttcttggacacttccttaaggctcctggagctcctgcacaaagtgaacgagagagccggt
cagatcatccggtacgataaattctacatccatgagctggacgagctgatagacatcaga
catgactatgtgacgtggatccagaggcagatgtaccctctgggtcacgacggtgtggtg
actctctgcaagtacccctttgtctttgacgcccaagctaaaacaaccctgcttcaaacg
gatgccgtcatccagatgcagatggcggttgatcaggcccagttacagaacttcagctcc
atgttcatgcctgctgtggagtcggtcaacccgtgtctcatcctcatcgtccgaagggag
aacatcgttggagacacgatggaggttctcaggaagtcaaagaatgtggactacaagaaa
ccgctgaaggtgatctttgtgggggaggacgccgtggatgcaggcggggtgaggaaagag
ttcttcctcctgatcatgaaggagctgctggatcccaaatacgggatgttccgttaccac
gaggattccaggctcatctggttttcaaacaagactttcgaggacattgacctgtttaac
ctcatcgggctcatctgcggcctggccatctacaacctgaccatcgtggagctccacttc
cctttggcgctctacaagaagctcttgaagaagaagccaacgctggacgacctgaaagag
ctgatgccagacgtggggaggagtctgcagcagctgctggactacacggaggatgacgtg
gaggaaaccttctgcctgaatttcactatcacagaggaaaactacggagccacagaagtt
catgagctggttccaaatggagaagagctcagtgtgaacaaaggcaacaggcaggacttc
gtgaacgcctacgtggattacgtcttcaactcgtccgtggcgtcgctcttcgagtgcttc
tactcaggtttccacaaagtgtgtggcgggaaagtgttggagctgttccagccgagcgaa
ctgcaggccatggtcatcgggaacacgaactacgactggacagaacttgaaaagagtacc
gagtacaaaggggagtactgggctgaacatccaaccatcaaactcttctgggaggtcttc
catgaacttccgttggagaagaagaagcagtttctcttgttcctcacaggaagtgaccgc
attcccatcttgggcatgaagagcctcaaactggtgatccagcccacgggtggaggggag
cagttcttacctgtagcccacacctgcttcaacctgctggaccttcccaagtacacgagt
ccggaagcgctccgcgagaagcttttacaggccatagatcacaaccgaggcttcaatctg
gcgtga
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