Ostreococcus lucimarinus: OSTLU_438
Help
Entry
OSTLU_438 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OSTLU_438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
olu03009
]
OSTLU_438
Ribosome biogenesis [BR:
olu03009
]
Eukaryotic type
Pre-60S particles
GTPases
OSTLU_438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
GTP_EFTU_D2
EFG_III
EFG_IV
ThrE
Motif
Other DBs
NCBI-GeneID:
5006454
NCBI-ProteinID:
XP_001422442
JGI:
438
UniProt:
A4SAI9
LinkDB
All DBs
Position
19:complement(join(<119029..119082,119145..>122093))
Genome browser
AA seq
1001 aa
AA seq
DB search
DGAQCRNVCVLAHVDHGKTTLTDALVAHNGFISQKQAGQMRYMDFHEDEQRRGITMKSAG
IALLYTPRAAREKKRDGDEGGEEIVERVLITVIDSPGHVDFCSEVSAAARLSDGCLVVVD
VVEGVCVQTHAVLRQAWEERLKPCLVFNKLDRVCVELGYTPMEAYERIRSLLHEVNGLMS
AFESEKFISQADTFLSAFDAHEEGRGENGGENDATTTTTTCDYLEDEEDLVNEEEAFNIA
SGNVAFGSAIDGWAFRPDAFADLYAEKLGCSSAALTKALCGDWYYHPKMKRIVSRKVANG
KLKPLFVQCILEPIWKIYRTAESEKNGEWVEKDLATLARALKVDVGERELKNTDRRAALQ
SVMRAWLPMSSCLLEMVVNCVPNPVAAAARRVNRVMPQPVLRGARPKGLDEARRAVIAGK
ASDDAPKIIFVCKMIAVPKVHVQGALTEAGGGDVKFLAFARIYSGTVRKGDKLYVLNSQH
DPSDYDASNIEEVELTELYLMMGQGMFKVDEVPAGNLLAIGGLDRAILKSATLSSSLECP
PFGEMMFQASAIVKVAVEPENVTDMDALVEGLRLLNRADAFVEVSVMDTGEHVVAAAGEV
HLERCVADLRERFAKVPIRVSPPIISFREGVTTTGTASSSTANGRLTFTCTAKPIHNFIV
RAVDDSADALKVILLAKDTESDENKMLAKAFIEKVTAAREAATYDEQGPEGVVEDTFRSA
WALGPKRVGSNVLNVGTYTVDVDDEEKEFGHANVGVALGVRKPYDMDGSPPEDVAADFDL
NSVQGSVLTGFQMATDRGPLCDEPLTGVQITLNVAVNRGNEDDDRTVEDTDGDQFGPLSG
QIINAVRDAIRKAVLKAGTRLVEAMYLAVITTTADALGGTYAVLGKRRSQVLSETIREGT
GVFVIHAYLPVATAFGFVDQLRAQTSGASTAQLVFSHWSPIDMDPFFTPTTEEEREEYGE
EGDVGPNIARQLMDSVRRRKGLKVEEKIVQVATKQRTLARK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gacggcgcgcagtgccgaaacgtgtgcgtgctcgcgcacgtcgatcacggcaagacgacg
ctcacggacgcgctcgtggcgcacaacgggttcatatcgcaaaagcaagcgggacagatg
cggtacatggactttcacgaggacgaacagcgacgagggatcacgatgaagagcgcgggg
atcgcgctgctgtacacgccgagggcggcgcgcgagaaaaagcgcgacggcgacgagggc
ggcgaagaaatcgtcgagcgagtgctgataacggtgatcgattcgccgggacacgtggat
ttttgcagcgaagtgtcggcggcggcgcggctgagcgacgggtgcttggtcgtcgtggac
gtcgtggagggggtgtgcgtgcagacgcacgcggtgctgcgacaggcgtgggaggaacga
ttgaagccgtgcttggtatttaataagctcgatcgcgtgtgtgtcgagctcggttacacg
ccgatggaagcgtacgagagaatacggtcgttgttgcacgaggtgaacgggttgatgagc
gcgtttgagagcgaaaagtttatatcgcaggcggatacttttttgagcgccttcgacgcg
cacgaggagggaaggggcgaaaacggcggcgagaacgacgcgacgacgacgacgacgacg
tgtgattatctcgaagacgaagaagatttagtgaatgaggaagaggcgtttaacatcgcg
agcgggaacgtggcgtttgggagcgcgatcgatggatgggcgtttcgcccagacgcgttc
gcggatttgtacgccgaaaagctcgggtgctcgtccgcggcgttgaccaaggcgctgtgc
ggagattggtattaccacccgaagatgaaacggatcgtcagtcgcaaagtggcgaacggg
aaacttaaacctttgttcgtgcagtgcattttggagccgatctggaagatctatcgcacg
gcggagagcgaaaaaaacggcgagtgggtggaaaaggatttggccaccctcgctcgagca
ctcaaggtggacgtgggcgagcgagagctgaaaaacacggatcgtcgagcggctctacag
agcgtcatgcgtgcctggcttccgatgtcatcgtgtttattagagatggtggtgaattgc
gtgccgaatccagtagccgccgcggcgcgacgcgtcaatcgagtcatgccacagcccgta
ctgcgtggcgcgcgcccgaaaggcttggacgaggcccgacgcgcggtaatcgcaggtaag
gcttcggatgacgcgcccaagatcattttcgtctgtaagatgatagctgtgcccaaggta
cacgtccaaggtgcgctcaccgaagcgggtggtggcgacgtcaagtttttagcctttgcg
agaatttattcgggcacggtacgaaaaggcgacaagctctacgtgttgaattctcagcac
gacccgagcgattatgacgcgtcgaacatcgaagaagtggagcttaccgagctgtacctc
atgatgggtcaagggatgttcaaggtggatgaagttcccgccggaaacttgctcgccatt
ggcggcttggacagggcgattttaaagtccgccacgctctcgtcttcgctcgagtgcccg
ccgtttggggaaatgatgtttcaggcgtcggcgatcgtgaaggtggcggttgaacccgaa
aacgtgaccgacatggacgctctcgtcgaaggtttacggctgttgaatagagctgacgcc
tttgtcgaggtgagcgtgatggacacgggcgagcacgtcgtcgcggcggcgggtgaagtg
catctcgagcgatgcgtcgcggatttgcgcgagcgattcgccaaggttcccatacgtgtg
tccccgccaatcatttccttccgcgaaggcgtcacgaccacgggtacggcgtcgtcgtcg
acggcgaatggacgtctgacgtttacgtgcacggcgaaacccattcacaacttcatcgtt
cgcgcggtggatgattctgcggatgcgctcaaggtgatattgctcgccaaagacaccgaa
agcgacgagaacaaaatgctcgccaaagcattcattgagaaagtgacggcagcgcgcgaa
gcggctacgtacgatgagcaaggtcccgaaggagtagtggaggatacatttcgttcggcg
tgggctctaggaccgaagcgcgtaggatcaaacgtgctcaacgtcggcacgtacaccgta
gacgtggatgatgaagagaaggagtttggccacgctaacgtgggcgtcgcgctcggggtg
agaaagccctatgacatggacgggtctccgccagaagacgtcgcggctgattttgatttg
aactcggtgcaaggaagcgtgttgacgggatttcagatggcgaccgatcgcggcccgctc
tgcgacgaaccgctgactggagtgcagataacgctgaacgttgccgtgaatcgaggcaat
gaagatgacgaccgtaccgtcgaagatacagatggcgatcagtttggtccgctctcgggt
caaatcatcaatgcggttcgagacgcgattcgcaaagccgtgctcaaggccggaacgcgt
cttgtcgaggcgatgtacttggcggtcatcactaccactgcggacgcactcggaggtact
tacgccgtgctcggtaaacgccgatcgcaagtgttgtcggagaccattcgcgagggcacg
ggggtgttcgtgatccacgcctacctgccggtggcgacggcgtttggctttgtcgatcag
ctccgcgcgcaaacctcaggggcgtccacagcgcaattagtatttagtcactggagcccc
atagatatggatccattttttacgccgaccacggaagaagagcgagaagaatacggtgaa
gagggtgacgtcggacccaacatagcacgacaactcatggactcggtgcgccggcgaaaa
ggcttaaaggtcgaagagaagattgttcaagtggccacaaagcaacgcacgttggccagg
aag
DBGET
integrated database retrieval system
