Oenanthe melanoleuca (Eastern black-eared wheatear): 130249229
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Entry
130249229 CDS
T09236
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04140
Autophagy - animal
oma04148
Efferocytosis
oma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130249229 (VPS41)
04148 Efferocytosis
130249229 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130249229 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130249229 (VPS41)
Membrane trafficking [BR:
oma04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
130249229 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Vps39_2
Vps39_1
ANAPC4_WD40
Frtz
zf-RING_5
zf-RING_11
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130249229
NCBI-ProteinID:
XP_056339781
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Position
2:complement(95236207..95342769)
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AA seq
854 aa
AA seq
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MAEAGEKETRSNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSAEEFH
ETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGEGNIRNVKWR
GHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKI
CSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEISEKTEVECCA
RPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEYDLAARKCQK
ILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLESDYEGFATLI
KEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLTLRHKDVF
QLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDASKSFSVVVFHCRHMFHRECLPVSNTVSSVQFCNICSA
KHRGPGSAVLEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccggggagaaggaaaccaggtctaatgaggaatcaacagatgaatctgag
gaagatgagagtgaagaagaacctaagctcaagtatgaacggctttctaatggagtgact
gaaattctccagaaggatgcagccagctgcatgacagtgcatgaaaagtttttggcactg
ggaacacattatggcaaagtttatttactggatgtccaggggaacatcacacagaagttc
gatgttagcccagtgaagataaatcagatcagcctggatgaaagtggagaacacatgggt
gtttgttcagaagatgggaaggtgcaagtgtttggattatattcagcagaagagtttcat
gaaacatttgactgtcctattaaaattgttgctgttcatcctcattttgtaagatcccac
ttcaagcaatttgtaacaggaggaaaaaagttgctgttatatgaaagaggctggatgaat
agatggaagccttcagttttacatgaaggggaaggaaatataagaaatgtaaaatggaga
ggacacttaattgcttgggctaataatatgggcgtgaagatacttgacatgatctccaag
caaagaattaccaatgtgcctcgagatgacataagccttcgcccagatatgtatccctgc
agcctttgctggaaggataatttaacactgattattggctggggaaattcagtaaagatt
tgctcggtaaaagaacggcatgccagtgaaatgcgtgacctaccaaaccgctacgtggaa
atagttttccagtttgacaccgaattctacatcagtggacttgcacctctctgtgaccag
cttgttatactttcatatgtaaaggagatctctgaaaaaacggaagttgagtgttgtgca
aggcccagactcgacattgtacagcccctgcctgagtcctgtgaagagatctcttctgat
gcactaacagtacgaggatttcaggaaaatgaatgtcgtgattatcatttagagtattcg
gaaggtgaatcacttttttatatcatcagcccaagagatgtggttgtggctaaagagcgg
gaccaagatgaccacattgactggcttcttgaaaagaagaaatacgaagaagctttgatg
gcagctgagatcagtcagaaaaccataaaaaagcacaagattttggacattggcttagcc
tatataaatcacctggtggagaaaggagaatatgacctggctgctcgaaagtgccagaaa
atccttggcaaaaacacagaactctgggaatttgaagtttacaagtttaaagaaataggt
cagcttaaagcaattagtcgttacttgccaagacgagatccagttttgaaacctcttatc
tacgaaatggtcctgcatgaatttttggagagtgactatgaggggtttgcaaccctaata
aaagagtggcctggagatctgtacaacaatacaatcatagttcaagctgtagtggatcac
ctgaagaaagatccacagaacaggactttgctacgaacacttgcagaattgtacacttac
gatcagcgctatggcagagccctagaaatctatttaactctgaggcacaaagacgtcttc
cagctgatccacaagcacaatcttttcagttctatcagagacaaaattgttctgctcatg
gattttgattcagagaaagcagtagacatgcttttggataatgaagataaaatttctatt
gacagagttgttgaagaattagaaaacaggcctgagttacagcatgtgtatttacacaag
cttttcaaaagagaccaccataaaggccaacgatatcatgagaaacagatcagcctttat
gctgaatatgatcgaccaaacttacttccatttctcagagacagcacacattgcccactg
gagaaggctcttgagatctgccagcagaggaactttgtggaagagacagtctatcttctg
agcaggatgggtaacagccgcagtgccttgaagatgataatggaagaattgcatgatgtg
gataaagctattgaatttgccaaggaacaagatgatggagaactttgggaagatctcata
ttatattctattgacaaaccaccttttattactggtttgttgaacaatattggaacccac
gttgatcctattcttttgatccaccgcattaaggaaggcatggagattcctaatttgaga
gactcactagtgaagattcttcaggactacaacttgcagatcttgctgcgggaaggttgc
aaaaagattctcgttgctgattctctttccttactgaagaaaatgcatcgaactcagatg
aagggtgttctagtggatgaggagaatatctgtgaatcatgtctgtctccaatacttcct
tcagatgcatccaagtccttcagtgtggtagtgttccactgcagacacatgtttcacagg
gagtgcctacctgtatctaacacagtatcttctgtccagttctgcaatatatgcagtgcc
aaacaccgggggccaggaagtgcagtcctggagatgaagaaatag
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