Oenanthe melanoleuca (Eastern black-eared wheatear): 130255994
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Entry
130255994 CDS
T09236
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130255994 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130255994 (LAMC1)
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GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
130255994
NCBI-ProteinID:
XP_056353130
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Position
8:22447810..22512919
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AA seq
1600 aa
AA seq
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MGGGGERWPLWLWVLWLWAPARCGAAMDECADERSGRAQRCMPEFVNAAFNATVLATHTC
GTPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLAGVQH
PTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTQEDGPWVPYQYYSGSCESTYRKT
NRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDI
RVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCKH
NTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCTA
CAGNTDGPHCERCRHSFYRLASEQPCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCDR
CQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDSSNP
RGCTPCFCFGHSSVCTSAVGYSVYSITSSFEFGEDEWRAEQRDGSEVPLQWSAETQDISV
ISDTYFPMYFVAPRKFLGNQVLSYGQDLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLI
AQGNSYPSENVQTYTFRLHEAADYPWRPTLTAFEFQKLLHNLTSIKIRGTYSERSAGHLD
DVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCTSGYRRETPSLGPYSPCVPCACNGH
SETCDPETGMCNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGASSCAIVPRTKE
VVCTSCQAGTTGKRCELCDDAYFGDPLGQNGAVRPCRLCQCNNNIDPNAVGNCDRQTGEC
LKCIYNTAGFYCDRCKDGFFGNPLAPDPSDKCKACHCNPYGTVNQQTICNQVTGQCECLS
HVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVTGQHCDRCE
PNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGCQ
ECPACYRLVKDKVAEQRQRLQELENLIANLGSREEAVTDEAFEERLKQAEREVMELLHEA
QKSKDVDQGLMDRLKDINSTLVSQLNRLRNIQGTVQDTEKLAEQARVRVEDTQDLISLAS
NMLERAKMAADNVSITPPEQSGDPNNMTVLAEEARKLAERHKKEADEIVRTAKAANDTST
EAYQLLLKTLAGENQTAIDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNRALQIYA
NLTSLPTVDSTGLENRANNIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKGK
TEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILSNLKDFDRRVNDNKTAAEEALK
KIPAISQTIAEANNKTQQAELALGNAAADAREAKARADDAEKIASSVQKSAAATRAEADK
TFADVTGLAREVDDMMKQLQNAEKELKRKQDDAEQDMRMANEASQAAQEAEDNARKAKNS
VNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDNDLDQKVSFLEREAKKQD
DAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcggcgagcgctggccgctgtggctctgggtgctgtggctgtgggcgccc
gcgcggtgcggcgctgccatggacgagtgcgcggatgagcggagcgggcgggcgcagcgc
tgcatgcccgagttcgtcaacgcggcgttcaacgctacggtgctggccacgcacacgtgc
gggacgccggccgaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcctgc
cacctctgcgacgccgcccagccgcacctgagccatggcgccgccttcctcaccgactac
aacagcccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcagcac
cccaccgccgtcaacctcaccctgcacctgggaaaagcctttgacatcacgtacgtgcgc
ctcaagttccacaccagccggcccgagagctttgccatctacaagcgcacgcaggaggac
ggcccctgggtgccctaccagtactacagcggctcctgcgagagcacctaccgcaaaacc
aaccgcggcttcatccgcaccggggaggacgagcagcaggcgctctgcaccgatgagttc
agcgacatctcccctctcaccgggggcaacgtggccttctctacgctggaggggcgtccc
agtgcctacaactttgacaacagccctgtgctgcaggaatgggtgacagctacagatatt
agagtgaccctcaaccgtctgaacacatttggagatgaagttttcaatgacccaaaagtt
ctcaagtcttactactatgcaatttctgattttgctgtgggtggtaggtgcaaatgcaat
gggcacgcgagtgagtgtgtgaagaacgagctggggaagctggtctgcaactgtaagcac
aacacctttggggtggactgtgagaagtgccttcccttcttcaatgaccggccctggagg
agagccacggcggagagcgccaacgagtgcctgccgtgcgactgcaacgggcgctcccag
gagtgctacttcgaccccgagctgtaccgcgccacgggccacggcggccactgcaccgcc
tgcgccggcaacaccgacgggccacactgcgagcgctgccgccacagcttctaccgcctg
gccagcgagcagccctgcctgccctgcagctgcaaccccgtcggctccctcagcacacag
tgtgatagctatggccagtgcagctgcaagcccggcgtgatgggggacaagtgtgaccgg
tgccagccaggcttccactccctctccgaagctgggtgcaggccctgctcttgcaatgct
gctggcagcacaggggaatgcaatgtcgagacagggcggtgtgcgtgcaaggacaacgtg
gaaggattccactgtgagagatgcaaacctggatttttccatctggattcttccaatcca
agaggctgtaccccctgcttctgttttggacactcttcagtctgcaccagtgctgtgggc
tacagtgtctatagcatcacctccagcttcgagtttggagaggatgagtggcgtgctgag
cagcgtgatggctcggaagtcccgctccagtggagtgccgagacccaggatatctccgtt
atctcagacacctacttccccatgtacttcgttgcaccacgcaagttcttgggcaaccag
gttttgagttatggacaagacctgaccttctccttccgtgtggacaggcgggacacgcgc
ctctctgcagaggacctggtgctggaaggggctgggctgagggtgtcagtgcctctcatt
gcccagggcaactcctaccccagtgagaatgtgcagacctacaccttcaggctccatgag
gctgcagactacccgtggaggcctactcttacagcatttgaattccaaaagcttctccac
aacttgacttccatcaagatccgtgggacatacagtgagagaagtgccggtcacctggat
gatgtgaccatcacaagcgctcgccccggacctggtgtgcctgtggcctgggtggagagc
tgctcgtgtccggtgggctacgaggggcagttctgcgagcgctgcacctctgggtaccgg
cgagagacgcccagcctggggccctacagcccctgcgtgccgtgcgcgtgcaacgggcac
agcgagacctgcgatcccgagacgggcatgtgcaattgcagggataacacggcagggacc
cactgtgagaagtgcagcgatggctattacggcgacgccacggctggcacggcctcggac
tgccagccctgcccctgcccaggcgcctccagctgtgccattgtgccccgcaccaaggag
gttgtgtgcaccagctgccaggctggcactacaggcaagaggtgtgagctgtgtgatgat
gcctattttggagaccccctgggccagaatggtgcagtgaggccctgccgcctgtgccag
tgcaacaacaacatcgaccccaacgccgtgggcaactgcgaccgccagaccggcgagtgc
ctcaagtgcatctacaacacggctggcttctactgcgaccgctgcaaggatggcttcttt
gggaaccccctggcccctgacccctctgacaagtgcaaagcttgtcactgcaatccctat
ggcacagtgaatcagcagacaatctgcaatcaagtgactgggcagtgtgagtgcttgtct
catgtcactgggagggactgcagtgcctgcgagcctggattcttcaacctccagagtgga
cgtggctgtgagaggtgcaactgccacgcgctgggctccaccagcgggcagtgtgacatc
cgaacggggcagtgcgagtgccagcccggcgtcaccggccagcactgcgaccgatgcgag
cccaaccacttcggcttcggctccgaaggctgcaagccctgtgactgtgatcctgagggc
tcacgctcgctgcagtgccgggagaacggtcactgtgagtgcaaggagggcttcgtgggc
agccgctgcaaccagtgcgaggagaactacttctacaaccgctcgtggccaggctgccag
gagtgtccagcctgctacagactagtgaaagataaggtggcagagcaacgtcaaaggctg
caggagctggaaaatcttatagcaaacctgggtagcagagaagaagctgtaactgatgaa
gccttcgaagaacggttgaagcaggcagaaagagaagttatggagttgctccatgaagca
caaaagagcaaagacgtagatcagggcctcatggatcgtctcaaggacatcaacagcacc
ttggtgagtcagctgaacaggctgaggaacatccagggcacggtgcaggacacagagaag
ctggcggagcaggcgcgggtgcgggtggaggacacgcaggacctgatcagcttggcttct
aatatgctggagagggccaagatggcagctgacaacgtgtcgattacacctccagagcaa
agtggggaccccaacaacatgactgtgttggcagaagaggcccgtaagctggcagaaagg
cacaaaaaggaagctgatgagattgttcgcacagccaaggctgccaatgatacttccacg
gaagcatatcagctgctgctgaagaccctggctggagagaaccaaactgcaattgatatt
gatgagctcaaccagaagtacaatcaagcaaggaatatttctcgagacctagagaaacag
gccaacaaggtgcttgcggaggcagaggaagctggaaacagagccctgcagatctatgct
aatctcaccagcctgcctactgtggattccacagggctagagaatagagcaaataacatc
aagaaggaagcagaggagctggatcaactaattgccaggaaactaaaagattacgaggac
ttgagagaagatatgaaaggcaaggaactagaagtaaagaacctcttggagaaaggcaag
acagagcagcagactgcagaccagctcttggctcgagcagatgcagcaaaagccctggct
gaagaagctgctcggaagagcagtggcacactacaggaggccaataccattctcagcaac
ctaaaagactttgacaggcgggtgaacgataacaagacggcggccgaggaggcgctgaag
aagatccctgccatcagccagaccattgcagaggccaacaacaagactcagcaggcagag
ctggcactgggcaatgctgctgccgacgcccgtgaggccaaggccagggcagatgatgct
gagaaaatcgccagctctgttcagaagagtgctgctgctaccagagctgaagccgacaag
acctttgctgatgtgacaggactggccagggaggtggatgacatgatgaagcagctgcag
aatgcagaaaaagagctgaagaggaagcaggatgatgctgagcaggatatgaggatggca
aatgaggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagctaagaattct
gtgaacagcctactcactgtcattaatgacctgttggatcagctagggcaactggagaca
gtggacttgaacaaactgaatgaaattgaaggtaccttgaacagtgccaaagaccagatg
aaagataatgacctggaccagaaagtgtctttccttgagagagaagccaagaagcaagat
gatgcaatacaggcctacaacagggacattgaagagatcctgaaggacataagcaacctg
gaggacatcaggaagaccttgccatctggctgtttcaacaccccgtccattgagaagccc
taa
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