KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130256774
Entry
130256774         CDS       T09236                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510  Focal adhesion
oma04512  ECM-receptor interaction
oma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130256774 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130256774 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130256774 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oma04147]
    130256774 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:oma00536]
    130256774 (COL4A3)
Exosome [BR:oma04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   130256774 (COL4A3)
Glycosaminoglycan binding proteins [BR:oma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130256774 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 130256774
NCBI-ProteinID: XP_056354707
LinkDB
Position
9:9435946..9490059
AA seq 1670 aa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NT seq 5013 nt   +upstreamnt  +downstreamnt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggtagtaagggtgaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
tttacaggcttagttggacccaaaggtatacgaggactcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggagctgttggtcctcctgggctcccgggtgtt
ccaggatgcaacggcaccaagggtgaccaaggatttccaggtcctccaggccaaagaggt
gctccaggccttccaggagttgttggtatcaaaggagagaaggggtaccctgcagaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccagggatgccaggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgcctgggaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaagaaagggtgacattgggttaactggaccccctgggcccccagga
actgttattgtgacgttaagcggaccagacaacatcacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccagggccaatgggatttacagggccggttggtgactct
ctaagtgaaaaaggtgaccaaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccaccaggtttaccgggtcaaaatggtgaacagggcaagccaggactgcct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccacctggagcttgtggtcga
actgagtattatgattatgtggctggtgaaaaaggggatgaaggaccccccggacctcca
ggaccaaaaggtcaacgtggcatacctgggccacagggtcctccaggagctgctggtaga
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggaaca
aagggagagagaggacaaactggcttgcatattgtaggccctccaggactgcctggtatt
actggcaggcctggctctgttggattaccaggtcctccaggagaaccaggtagagtaaca
tttggaactggcctaccaggacttcctggagagccagggtgtataggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctggtgtgtgtactgattgtagctacatt
ccgggaatgcctggttttcctggttctcctgggcctcgtggtcaggatggcatgcctggt
ggggaaggaacaacaggtccaaaaggttctccaggttctccaggagcaccagggtttcca
ggggctcaaggacctcaaggttttagaggagagcaaggacgtaaaggatcaaaaggtgag
ccaggatatgtacatccagaagggccaaaaggtgagcgaggagatccaggagccatggga
gacaaaggaagaagaggttcaagtggatttatgggaagacctggctctaaagggtcgaag
ggttctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggattg
cctggtagacttgggcttcctggagaaatgggccttcctggactgccaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatccgtggaccacctggattacctgga
gaagctggtctgaaaggagagaccagtagggcaactccattacctgcattgcctggacct
cagggaccacatggtttacctggacccccaggaatgcctggtaggattggagcaagaggt
cagccaggtgatccagggcattcaggaccaacaggtgacacaggttttccagggcttggg
tttcctggaaacccaggtccaaaaggagacaaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagactggagatccaggccgaactggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagtcctggctcaaaaggtgaaggtggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgagggactaagaggagatcgtggctcacctggacttcct
ggagacccaggttttcctgggagacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctaggtcctcctggtctgagtatcccaggaatctacggaaggcctggggaacctggacta
ataggtcttcagggaaatatgggattacctggtcccaagggacagtctggaagaccagga
atctctggtttgccaggagcaaggggagatccaggtgcaatgggactgttaggaattcct
ggaccccccggcatggctggaagaccaggcagtccgggaatcagaggttctcctggcttc
ccaggaataaagggaagaaaagggtttcatggagaaaaaggcgaatcaggtgataaaggt
tttcctggaccatctgagaccttggttggtattggggacaaaggagagcaaggtttaaaa
ggagctcaaggccgaatgggtgcaaggggagaaaaaggagatgttggtgtgcagggtccc
ccaggtgttgatgggtctgaaggaatacctggtctaccaggagccaaaggattcatgggt
cttccagggactcctggaagacaaggattcccaggtgcactcggaaatcaaggggacatg
ggaattccaggtccaaaaggccagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctgcaggagaacctggtccaaagggagatccaggtcccccaggagtttttggc
agcaaaggagaaaagggctctgagggccatccaggacttacaggagtaccaggaccacgt
gggatcagaggggaaactggaggtgcaggaatcccagggaagagtggaccccctggagat
atgggtgataaagcacgccagggccgcccaggacagccaggagtcccaggccctcctggt
gccgttggagtcccaggaaaacatggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggtcccccaggagtaaagggagaaccaggaccaccagggagagggatccct
ggtgttcgaggttttcctggacgtagaggaatcaaaggagacatgggactgcctggtttt
cctgggcctccaggtgtgaaaggtcatcagggagatcaaggacccattggacctcctggc
tttgtggggttacctggatttcaaggtgccacaggcatggcagtcactggccagaagggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggtctttccactctcagcatgaaaggaagcaaaggtgtccgaggggcagatggaatacca
gggccaaggggcccagccggtgacattggccctcctggtcccaaaggcatagaaggtcga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcagggacccccaggaccacaaggtgcagaagggccaaggggaccaaaa
ggccagcatggcccacctggagtctctggaaaaacattctccatcccaggaagcaagggt
cctccaggactgccaggaatcccaggaacaccaggtgatcaaggagttcaagggattcct
ggactacaaggacctaaaggagtaaaaggtctaccaggacgttttggtcatccaggtcat
ccaggattgcccggtccaaaaggagacaggggatttccaggacaaagaggacaacctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactatcgttgctggg
ccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagattccttcatgc
ccacatgggacatcccagatctatgttggctattcactgctttttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgtagccccaatgatgtttgtagctttgcttctcgtaatgactactcc
tactggctgtccaccacagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaactactgtagttcctgcatgtccagatggctggatgtctctctggaagggt
ttttcttttgttatgtacacaagtgccggctcagaagcttctggccaagcattggcatct
cctggatcttgtctggaagaatttcgggctgtcccgtttatagagtgccatggcaggggg
acgtgcaactactacacaaattcctacagtttctggttggcatcattaaatccaagaaga
atgttcaggagacctgtgccacagactttgaaagcaggacaactagaaaatatcatcagt
cgttgtcaggtctgcatgaggagaccaatctaa

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