Oenanthe melanoleuca (Eastern black-eared wheatear): 130256774
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Entry
130256774 CDS
T09236
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130256774 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130256774 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130256774 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130256774 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
oma00536
]
130256774 (COL4A3)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
130256774 (COL4A3)
Glycosaminoglycan binding proteins [BR:
oma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130256774 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
130256774
NCBI-ProteinID:
XP_056354707
LinkDB
All DBs
Position
9:9435946..9490059
Genome browser
AA seq
1670 aa
AA seq
DB search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NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggtagtaagggtgaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
tttacaggcttagttggacccaaaggtatacgaggactcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggagctgttggtcctcctgggctcccgggtgtt
ccaggatgcaacggcaccaagggtgaccaaggatttccaggtcctccaggccaaagaggt
gctccaggccttccaggagttgttggtatcaaaggagagaaggggtaccctgcagaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccagggatgccaggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgcctgggaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaagaaagggtgacattgggttaactggaccccctgggcccccagga
actgttattgtgacgttaagcggaccagacaacatcacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccagggccaatgggatttacagggccggttggtgactct
ctaagtgaaaaaggtgaccaaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccaccaggtttaccgggtcaaaatggtgaacagggcaagccaggactgcct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccacctggagcttgtggtcga
actgagtattatgattatgtggctggtgaaaaaggggatgaaggaccccccggacctcca
ggaccaaaaggtcaacgtggcatacctgggccacagggtcctccaggagctgctggtaga
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggaaca
aagggagagagaggacaaactggcttgcatattgtaggccctccaggactgcctggtatt
actggcaggcctggctctgttggattaccaggtcctccaggagaaccaggtagagtaaca
tttggaactggcctaccaggacttcctggagagccagggtgtataggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctggtgtgtgtactgattgtagctacatt
ccgggaatgcctggttttcctggttctcctgggcctcgtggtcaggatggcatgcctggt
ggggaaggaacaacaggtccaaaaggttctccaggttctccaggagcaccagggtttcca
ggggctcaaggacctcaaggttttagaggagagcaaggacgtaaaggatcaaaaggtgag
ccaggatatgtacatccagaagggccaaaaggtgagcgaggagatccaggagccatggga
gacaaaggaagaagaggttcaagtggatttatgggaagacctggctctaaagggtcgaag
ggttctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggattg
cctggtagacttgggcttcctggagaaatgggccttcctggactgccaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatccgtggaccacctggattacctgga
gaagctggtctgaaaggagagaccagtagggcaactccattacctgcattgcctggacct
cagggaccacatggtttacctggacccccaggaatgcctggtaggattggagcaagaggt
cagccaggtgatccagggcattcaggaccaacaggtgacacaggttttccagggcttggg
tttcctggaaacccaggtccaaaaggagacaaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagactggagatccaggccgaactggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagtcctggctcaaaaggtgaaggtggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgagggactaagaggagatcgtggctcacctggacttcct
ggagacccaggttttcctgggagacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctaggtcctcctggtctgagtatcccaggaatctacggaaggcctggggaacctggacta
ataggtcttcagggaaatatgggattacctggtcccaagggacagtctggaagaccagga
atctctggtttgccaggagcaaggggagatccaggtgcaatgggactgttaggaattcct
ggaccccccggcatggctggaagaccaggcagtccgggaatcagaggttctcctggcttc
ccaggaataaagggaagaaaagggtttcatggagaaaaaggcgaatcaggtgataaaggt
tttcctggaccatctgagaccttggttggtattggggacaaaggagagcaaggtttaaaa
ggagctcaaggccgaatgggtgcaaggggagaaaaaggagatgttggtgtgcagggtccc
ccaggtgttgatgggtctgaaggaatacctggtctaccaggagccaaaggattcatgggt
cttccagggactcctggaagacaaggattcccaggtgcactcggaaatcaaggggacatg
ggaattccaggtccaaaaggccagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctgcaggagaacctggtccaaagggagatccaggtcccccaggagtttttggc
agcaaaggagaaaagggctctgagggccatccaggacttacaggagtaccaggaccacgt
gggatcagaggggaaactggaggtgcaggaatcccagggaagagtggaccccctggagat
atgggtgataaagcacgccagggccgcccaggacagccaggagtcccaggccctcctggt
gccgttggagtcccaggaaaacatggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggtcccccaggagtaaagggagaaccaggaccaccagggagagggatccct
ggtgttcgaggttttcctggacgtagaggaatcaaaggagacatgggactgcctggtttt
cctgggcctccaggtgtgaaaggtcatcagggagatcaaggacccattggacctcctggc
tttgtggggttacctggatttcaaggtgccacaggcatggcagtcactggccagaagggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggtctttccactctcagcatgaaaggaagcaaaggtgtccgaggggcagatggaatacca
gggccaaggggcccagccggtgacattggccctcctggtcccaaaggcatagaaggtcga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcagggacccccaggaccacaaggtgcagaagggccaaggggaccaaaa
ggccagcatggcccacctggagtctctggaaaaacattctccatcccaggaagcaagggt
cctccaggactgccaggaatcccaggaacaccaggtgatcaaggagttcaagggattcct
ggactacaaggacctaaaggagtaaaaggtctaccaggacgttttggtcatccaggtcat
ccaggattgcccggtccaaaaggagacaggggatttccaggacaaagaggacaacctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactatcgttgctggg
ccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagattccttcatgc
ccacatgggacatcccagatctatgttggctattcactgctttttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgtagccccaatgatgtttgtagctttgcttctcgtaatgactactcc
tactggctgtccaccacagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaactactgtagttcctgcatgtccagatggctggatgtctctctggaagggt
ttttcttttgttatgtacacaagtgccggctcagaagcttctggccaagcattggcatct
cctggatcttgtctggaagaatttcgggctgtcccgtttatagagtgccatggcaggggg
acgtgcaactactacacaaattcctacagtttctggttggcatcattaaatccaagaaga
atgttcaggagacctgtgccacagactttgaaagcaggacaactagaaaatatcatcagt
cgttgtcaggtctgcatgaggagaccaatctaa
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