Oenanthe melanoleuca (Eastern black-eared wheatear): 130263332
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Entry
130263332 CDS
T09236
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130263332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130263332
03036 Chromosome and associated proteins [BR:
oma03036
]
130263332
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130263332
Coactivators
SAGA/TFTC/STAGA complex
130263332
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130263332
STAGA complex
130263332
TFTC complex
130263332
SAGA complex
130263332
SLIK complex
130263332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
Motif
Other DBs
NCBI-GeneID:
130263332
NCBI-ProteinID:
XP_056366814
LinkDB
All DBs
Position
25:5413494..5424004
Genome browser
AA seq
583 aa
AA seq
DB search
MSEKNREFRPEHRPRLRPAPERPAPGFWGPLTPFLPPAPKEQQKAEATEPLKSAKPGQEE
EGTPKSKGPGGAGGDGKGKEKKPPLLEAPPLRLKPRSVHELSVEQQLYYKEITEACVGSC
EAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTL
YLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQVCKNFSTTTNNIQSRI
TKTFTRSWVDDKTPWTTRYGSIAGLAELGHDVIKTLILPRLPAEGERVRNILEGPVVSTI
DRIGADHVQSLLLKHCAPVLAKARAPPDSPEAFRADFGYLGALLCSHVVKARAQAALQAQ
QVNRTTLTITQPRPTLTLSQAPPAPGAPPRPPSIIKVPSAIALPVPVPVPVPSLPSGRPG
TPTQPSPPPXFIVMSSASSAGQQVITLSTSPAPSATSPVTSTVPSVPSAVQPLVKLVPAP
GATSAAPGATSVPAGVPSAVQKYIVVSLPPAGDSKGGTASATAPVPSAAPQLSPSASGAS
PKGEAGDSPQGGVAATGAATSATSATSATSAAFKANGAQEGGQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaaaaccgggaatttcgtcctgagcatcgcccgcgcctgcggcccgcgccg
gagcgccccgccccgggattttggggtcccctgaccccttttttgcccccagcccccaag
gagcagcagaaggccgaggccactgaacccctgaaatcggccaagcccgggcaggaggag
gaggggaccccgaaatccaaggggccaggaggggctgggggcgatggaaaagggaaggag
aagaagccccccctgctggaggcgccccccctgcggctgaagccgcgcagcgtccacgag
ctctcggtggagcagcagctctactacaaggagatcaccgaggcctgcgtggggtcctgc
gaggccaaacgggctgaagctctccagagcatcgccactgaccctgggctgtaccagatg
ctgccacgcttcagcaccttcatctccgagggggtgcgggtgaacgtggttcagaacaac
ctggcgctgctcatttacctgatgaggatggtgaaggctctgatggacaaccccaccctg
tacctggagaaatacctgcacgagctgatccccgctgtcatgacgtgcatcgtcagccgc
cagctctgcctgcgccccgacgtcgacaaccactgggccctgcgcgacttcgccgcgcgc
ctggtggcgcaggtgtgcaagaacttcagcaccaccaccaacaacatccagagcaggatc
accaagaccttcaccaggagctgggtcgatgacaagacgccctggacgacgcggtacggc
tccatcgcggggctggccgagctgggacacgacgtgatcaagaccctgatcctgccgcgg
ctcccggccgagggcgagcgcgtgcggaacattctggaagggccggtggtgagcaccatc
gaccgcatcggggccgaccacgtgcagagcctgctgctgaagcactgtgcccccgtgctg
gccaaggcccgcgcgccccccgacagccccgaggcgttccgggcggatttcgggtacctg
ggggcgctgctgtgctcgcacgtggtgaaggcgcgggcgcaggcggcgctgcaggcgcag
caggtcaacaggaccacgctgaccatcacccagccccgccccacgctgacgctgtcccag
gccccgccggctccgggcgcccccccgcgcccccccagcatcatcaaggtccccagcgcc
atcgccctgcccgtccctgtccccgtccccgtcccctccctgccctcgggccgccccggg
acccccacgcagccgtcaccgccccccnagttcatcgtcatgtcctcggccagcagcgcc
gggcagcaggtgatcaccctgagcacctcccccgcccccagcgccacctcccctgtcacc
agcacggtccccagtgtccccagcgccgtgcagccgctggtcaagctggtgccagcgccc
ggggccaccagcgccgcccccggggccaccagcgtccccgccggcgtccccagcgccgtg
cagaaatacatcgtggtgtccctgccccccgccggggacagcaagggtggcactgccagc
gccaccgcccctgtccccagcgccgccccccagctgtccccgagcgccagcggcgcctcg
cccaagggggaggcgggggacagtccccaggggggcgtggctgccaccggcgctgccacc
agcgccaccagtgccaccagtgccaccagtgccgccttcaaagccaacggggcgcaggag
ggggggcagtga
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