Onychostoma macrolepis: 131542054
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Entry
131542054 CDS
T09350
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omc04040
]
131542054 (scn1lab)
Ion channels [BR:
omc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
131542054 (scn1lab)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
131542054
NCBI-ProteinID:
XP_058634322
LinkDB
All DBs
Position
06:complement(7699468..7740264)
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AA seq
1884 aa
AA seq
DB search
MCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRDPWNWLD
FSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILT
VFCLSVFALIGLQLFMGNLRQKCVKMPEVNVTENLTATLNYNTSLELHRSFNWTEYINDD
RNYYFLPGRRDPLLCGNSSDAGQCPEGFTCIKAGRNPDYGYTSFDTFSWAFLSLFRLMTQ
DFWENLYQQTLRAAGKPYMVFFVLVIFLGSFYLVNLILAVVAMAYDEQNQATIEEAQQKE
EEFQAMLEQLKRQQEEAQLELSLPLVAPDNGACGVIGWQVAAAAATESGEYSGRGGLSEE
SSSGGSRLSSKSAKERRNRRKKRKQREEEEKADQEKFHKSASEDSIRRPGFRFSIDANRL
SYEKKCSTPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDS
RRGSLFVPGCIERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGR
LLPEGTTTESEARKKRSGSHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCW
YKFANSFLIWDCCPAWLKVKEIVNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTERFNH
VLLVGNLVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVL
RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGRSYRE
CVCKIADDCELPRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVI
GNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGIALVKSTLRQFLQSLC
LAGSKPRSLDEEKPLDDLHSDGKENCLSNHAPVAVDLTKDYLKEGCVSPGNGVEGHVKYG
IEEGDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLPVDAVLSSSE
GSTVDIRPPGEGAESVELEPEESLDPEACFTEGCVMRFQCCQVDVEKGKGKNWWILRKTC
FIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEFADKVFTYIFILEMLLKW
VAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITNDEMIPISVVN
NKSDCFALIANNVSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQP
DYESNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPSNKFQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTNEMDD
ILYWINLVFIILFTGECVLKMISLRHYYFTIGWNVFDFVVVILSIVGMFLSEMIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREAGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKHDPDCDSELEHPGSM
YRSDCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WERFDPNATQFVEYDKLSDFADALDPPLRIAKPNKIQLIAMDLPMVSGDRIHCLDILFAF
TLRVLGEEGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAVIIQRTFRRYRM
RQTVKKASKAYRQQLQDGNVRIPEKEVLVIGKFQENSASDKTDMTPSSASPPSYNSVAKS
EKDKYEKERREKEDKAKDARDRKK
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacaatcttgaccaactgcgccttcatgaccctcagcaatcccccggactgggcc
aagaatgtggagtacacgttcacagggatctacacctttgagtccctgattaagatcctg
gcacggggcttctgcgtggggaagttcactttcctgcgagacccctggaactggctggac
ttcagtgtcattctgatggcatatgtaacagaatttgtggatctgggcaatgtctcagca
ctgagaaccttcagggttttacgagcactcaaaactatatcagtgattccagggctgaag
actatcgttggcgctctgatacagtcggtgaagaagttgtcagacgtgatgatcctgact
gtgttctgtctgagtgtgtttgctctgatcggactgcagctctttatgggaaacctgcgg
cagaagtgtgtgaagatgccggaggtcaatgtcactgaaaacctgaccgccactctgaat
tataacaccagtttagagctgcacaggtcctttaactggacagagtacattaatgatgac
cgcaattattatttcctcccaggccgcagagatcctttgctatgtggaaattcaagcgat
gcagggcagtgtccagagggcttcacgtgtataaaagcaggtcgtaatcctgactacggc
tacacaagctttgacacattcagctgggccttcctctcactcttccgactcatgacacaa
gacttctgggagaacctctaccagcagaccctgcgtgcagctggaaagccctatatggtc
ttctttgttcttgtgatcttcctgggctccttctatctggtgaatctcatcctggctgtg
gtggccatggcatatgatgagcagaaccaggccaccatagaagaggctcaacagaaagag
gaagagtttcaagccatgctagaacagctaaagagacagcaggaagaggcacagcttgaa
ctaagtctacccctggttgcccctgacaacggagcttgtggtgtgattggttggcaggtt
gcggcagcagcagcaacagagagtggggagtacagcgggaggggaggcttgtcagaggaa
agctcctccggggggtccagactcagctccaagagtgctaaagagcgaaggaacaggagg
aagaaaagaaaacaaagggaagaagaagagaaagccgatcaggaaaagttccataagtcc
gcctcagaggacagcatcagacggcctggatttcgattctccatcgatgccaaccgactc
tcgtatgaaaagaagtgttccactcccaatcagtctcttctcagcattcgtggatctctc
ttctccccaaggaggaacagtcgtgcgagtctgttcagttttcgcggtagagcgcgagac
tttggctcagagaatgattttgcggacgatgagcacagcacgtttgaggatagcgacagt
cgccgcggatcgctctttgtacctggttgtattgagagacgaagttccactgtcagtcac
tgcagccttgctcccagaattatgctcccagccaatgggaaaatgcactgcacagttgat
tgcaatggagtggtctccctggtgggcgggacatctgtgccaacatcaccaatcggacgt
ttgttacctgagggcacgaccactgagtctgaggcacgtaaaaaacgttcaggatcacac
cagccttctgattatctggatgagacagtagccagaaaaagagctctcagtgtggccagc
attctgacaaataccatggaagaacttgaggaatcgcggcagaagtgtcctccatgttgg
tacaagtttgccaacagcttcctgatctgggactgctgtccagcctggctgaaggtgaag
gagattgtgaacatggtggtgatggatccatttgtagacctggccataaccatctgcatt
gttctcaacaccctcttcatggctatggagcactaccctatgacagaaaggttcaaccat
gtgctgttagttggaaacctggtattcacaggaatcttcacagcagagatgtgtctgaag
gtaattgctctagacccatattactacttccaagaaggctggaatatctttgacggcata
atcgtgagcctgagtctcatggaactgggcctggccaatgttgagggactttctgtgttg
cggtcttttagattgttaagagtctttaagctggcaaagtcttggcccaccctgaacatg
ctgataaagatcattggtaactcagttggtgctttgggaaatctaaccctcgtccttgcc
atcatcgtcttcatcttcgctgtggtgggaatgcagttgtttggaaggagctaccgtgag
tgtgtctgcaagatcgcagatgactgtgagttgccgcggtggcacatggacgatttcttc
cactccttcctgattgtgttccgagtgctttgcggcgaatggatcgaaaccatgtgggac
tgcatggaagtggcggggcagacaatgtgtctcatcgtcttcatgatggtcatggtcatt
gggaatctggtggtattgaacctgttcctggccttgctgctgagctctttcagtgccgat
aacctggccgccacggatgatgacagcgaaatgaacaacctgcagatcgccgtgggcaga
atacagaaaggcatcgctctggtcaagtccactttacgccagttcctccaaagcctctgc
ctggccggctccaaacctcgctctcttgacgaagagaaacctcttgacgacctccacagc
gacggcaaggagaactgcttgtccaatcacgctccggtggctgtcgacctcactaaagac
tatctgaaggagggctgcgtctcccctggtaatggggtggaaggtcacgtaaagtatgga
attgaggaaggcgactacatgtcgttcatacacaatcccagcctcactgttacagtaccg
attgcggtgggagagtcggactttgaaaatctgaacacggaagatttcagtagtgactcg
tctgacgtcgagggcagtaaagagaagctgcctgttgatgcggttctcagttcctcagaa
gggagcacagtggatatccgaccccctggagagggggcggagtctgtggagctggagccg
gaagagtccctggacccagaggcctgcttcactgaaggctgtgtgatgaggtttcagtgc
tgtcaggtcgatgtggagaagggaaaagggaagaattggtggattctcaggaaaacctgc
ttcatcattgtagagcacaactggtttgagtcctttatcatctttatgatattactcagc
agtggagcattggcttttgaggacatttacatcgagcaacgcaagacgataaagacagtg
ttggaatttgccgataaagtcttcacatacatctttattttggagatgcttctgaagtgg
gttgcttatggcttcgtcaaatacttcaccaacgcctggtgttggcttgacttcctgatt
gttgatgtgtcattagtgagtctggtagcaaatgctcttggttactctgaactaaccgcc
attaagtccctgagaacactacgtgctcttagacctttgagagcattgtcacgctttgag
ggaatgagggttgtagtaaatgctctgctgggagccataccttccatcatgaatgtgcta
ctagtgtgtttgatcttctggctgatcttcagcatcatgggggtgaacctttttgcgggg
aaatactaccattgtgtgaatatcaccaacgatgagatgattcctatcagtgtggtcaat
aacaagtctgattgctttgccttgattgcaaacaatgtctcggcgcgctggaaaaatgtg
aagattaatttcgacaatgtgggagctggatacttggcgctactgcaagtggccacattt
aaaggatggatggacatcatgtacgcagctgtggattctcgtgatttggagcaacagcct
gactatgaatcaaacctttacatgtacctgtacttcgtcatcttcattatcttcggctcc
ttctttactcttaacctcttcattggtgtcatcattgataacttcaatcagcagaagaaa
aagctaggaggtcaggatatcttcatgacagaagaacaaaagaaatattacaatgccatg
aagaaactgggatctaagaagcctcagaagccaattcccaggccttcgaacaagtttcaa
ggcctcatctttgactttatcaccaaacaagccttcgacattgtgattatgatcctgatc
tgcttgaacatggtgactatgatggtggaaaccgacgaccagacaaatgagatggatgat
attctgtactggataaacctggttttcatcatcctcttcactggagaatgtgtgctcaag
atgatctccctgcggcactactacttcaccattggctggaatgtgtttgactttgtagtg
gtgattctctcaattgttggtatgttcctctctgagatgattgagaaatattttgtatcg
ccaacgttatttcgagtcatccgacttgccagaatcggccgcattcttcgtctcatcaaa
ggagccaaaggcattcgtacactcctgtttgccttgatgatgtcacttcctgccttgttc
aatattggcctcctcctgttcctggtcatgtttatctatgccatcttcggaatgtccaac
tttgcctacgtgaagcgggaggcggggatcgatgacatgtttaactttgagacattcggg
aactcgatgctttgcttgttccagattacgacttcagcaggatgggacggtctcctggca
cccatcctgaacaaacacgatccagattgcgacagcgaattggagcacccgggcagcatg
taccgcagcgattgcggaaacccctcggttggcatcttcttcttcgtgagctacatcatc
atctgcttcctgattgtggtgaacatgtacatcgccgtgatcttggagaacttcagcgta
gccacagaggagagcgccgaaccgctgagcgaggacgactttgaaatgttctatgaagtc
tgggagcgattcgatcccaacgccacgcagtttgtggagtacgacaagctttctgacttt
gcggatgctctggaccctccattacgcatcgccaagccaaacaagatccagctcatagcc
atggacctgcccatggtcagtggcgaccgcatccactgcctggacatcctgttcgccttt
accctgagggtactgggagaggagggcgagatggatgccctgaggggacagatggaggat
cgtttcatggcctccaatccctccaaagtctcctacgagccaatcacgacaaccctccgg
aggaaacaagaggaaatgtcggccgtcatcatccagaggaccttccgacggtaccgtatg
aggcaaacggtaaagaaggcctccaaagcctaccgacagcagctgcaagacgggaatgtg
cgcatcccggagaaagaggtgctcgtcattggaaagtttcaagagaactctgcatcggac
aaaacggatatgactccctcctctgcatctccgccgtcttataacagcgtggccaagtca
gagaaagacaaatacgaaaaggagaggagagaaaaagaggacaaagcaaaagatgcaaga
gacagaaaaaaatga
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