Onychostoma macrolepis: 131551961
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Entry
131551961 CDS
T09350
Symbol
col21a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
omc
Onychostoma macrolepis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
131551961
NCBI-ProteinID:
XP_058651213
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Position
13:2416965..2546845
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AA seq
965 aa
AA seq
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MGCKMRSMRFVFWCLYFMLLHLFCTAQDEDMRLSCRTAPSDLVFILDGSWSVDDINFEIV
KRWLVNITMSFNIGQKFTQVGVVQYSDDPFLHIPLGKHFSSSDLIKAMESIEYMGGNTNT
GKAIKFANDKLFALSERGPNGIAKIAVVLTDGKSQDEVLAAAEAARKKGIILFAIGVGSE
TEEAELRAIANKPSSTYVFSVEDYKAIAKIREVIRQKLCEETVCPAKIAINSRDEKGFDI
LLHLNLAKKAKKTQGSFNGSKAYQVTSRVDLSESTRMLFPGGLPPSYVFVATLKYKGSVV
MEEWDLWRIQTKDENSQMAVSLNGLDRTVMFTTTTSSTPSGTQTVVFTKSPAKKLFDEKW
HQLRLLVTEEDVTLYVDDLEIETLALEPPDGIFINGKTQVGKYVSKETTVPFEIQKLRIY
CDPEQNNRETACEIPGVCANGPADIDSTPEPCICPAGPPGAPGMKGEQGRIGDPGQPGPA
GADGKPGVPGSRGSPGXQGSPGMQGPRGADGHKGEKGSLGETGDSGIPGLPGPPGKPGEK
GSAGNQGIQGLPGKDGQMGEKGSRGPAGPPGYLGEPGAPGRDGKDGIPGGIGLKGDPGPP
GIPGVDGREGHPGIPGIPGNDGQTGMKGESGLPGPKGAKGTPGDHGEMGSPGIPGSSGKP
GPKGTKGDSGEPGQPGPPGLEGKPGEPGAAGQTGHPGMPGSPGLKGQRGEAGERGVDGMR
GEKGDYGRPGVHGLPGPAGQKGERGTSGEPGQRGQIGHQGLPGQTGQTGPSGPRGLSGEI
GPPGPPGPEGRPGRELSEQHIQQICRDVLRSEIPALLLSSQHSHHRSCEHCYTRVGPPGP
PGPPGPHGSRGFPGLSGSNGLQGQRGLPGRPGVPGMKGDPGEKGEKGNQGRSQIGDPGLP
GPPGPMGPPGVGKTGHPGKPGPPGHNGEEGKRGHPGEPGQPGVCHPSMCYSAMLRRDPFS
KGPNY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcaaaatgagatccatgcgttttgtgttttggtgtctttacttcatgctcctt
cacttgttttgcacagcacaagatgaggacatgagattaagttgtaggacagcgccaagc
gatttagtattcatactcgatggatcatggagtgtagatgacataaactttgagattgtc
aaacggtggctggtaaatatcaccatgagcttcaacattggtcagaagttcactcaggtt
ggggtggtgcaatatagcgatgaccccttcttgcacatacccctgggaaaacatttctca
agcagtgacctcatcaaggccatggagtccatagaatacatgggtgggaacacgaacaca
gggaaggctatcaagtttgccaacgacaaactctttgccttgtctgagagaggtccgaat
ggcattgcaaaaatcgctgtggttctgacggacgggaagtcacaagatgaagtgctggca
gctgcagaagctgcgcggaaaaaggggataattctcttcgcaattggcgtcggttctgag
accgaggaggcagagctcagggccattgccaacaaaccatcctcaacctatgttttttct
gtggaagactataaagctatcgcaaagatccgtgaagttattaggcagaagctgtgtgaa
gagactgtatgtccagcaaagattgcaatcaattctcgagatgagaaaggatttgacata
ctcctccatctcaacttggctaaaaaagctaaaaagactcaaggatcttttaatggcagt
aaagcataccaggtgacatcccgagttgacctgagtgagagcaccaggatgttatttcca
ggcggacttccaccatcctatgtatttgtggccacactgaagtacaaaggctccgtggtt
atggaggagtgggatctatggcggatacagactaaggacgaaaattctcaaatggctgtt
tctttaaatggtctggacagaacagtgatgttcaccaccaccacaagcagcacaccaagc
ggaactcaaactgtggtcttcactaaatcacctgctaagaaactatttgatgaaaaatgg
catcagctgcgtcttctagtgacagaggaagatgtcactctgtatgttgatgatttggaa
atcgaaaccttggcactggagcctcctgatggcatttttattaatggaaaaacacaggtt
gggaagtacgtcagtaaagaaacaactgtaccttttgaaatacaaaaactcagaatctac
tgtgaccctgagcagaataacagagaaacagcctgtgaaatacctggagtttgtgctaat
ggaccagcggacattgattcaaccccagagccatgcatctgtcctgctgggccacctggt
gccccaggaatgaagggagaacaggggagaataggagatccgggtcaacctgggccagct
ggtgctgatggtaagcctggtgtcccaggttctagaggaagtcctggcnttcaaggctct
cccggcatgcaggggccacgtggagctgatgggcataagggggaaaagggaagtctcggg
gaaacgggtgacagcggtatcccagggttacctgggccacctggcaaaccaggtgaaaag
gggtctgctggcaatcaaggaatacaaggactgccaggcaaagatggacaaatgggagaa
aaagggagtagaggccctgctggtccacctggatatctgggagagcctggagcacctgga
agggatgggaaagatggaattcctggaggaattggtctaaagggagatccaggaccgcct
ggaattcctggagtggatggaagagagggacatcctggcatacctggtatacctggaaat
gatggtcagacgggaatgaagggtgaatctggcttgccagggccaaaaggagccaaaggt
acacctggagaccatggcgagatgggatcgcctgggatacctggttcaagtggaaagcct
ggccctaagggcactaaaggggacagtggagagcccgggcaaccaggacctcctgggcta
gagggtaagcctggagaacctggggcagctggccaaacaggacatccaggaatgccagga
tcaccgggactgaagggtcaaagaggagaagctggtgaaagaggcgtagacgggatgaga
ggtgaaaagggagattatgggcgacctggtgttcatggtttacccgggccagctggccag
aaaggagagagagggacatcaggcgagcccggtcagaggggtcagatcggccatcagggg
ctccctggacagacaggacagacaggaccctcggggcccagaggactgagtggagaaata
ggccccccaggaccacctggaccggaaggacgacctggcagagagctgtctgagcaacat
attcagcagatttgcagagatgtccttcgatctgagattcctgctctactattgagtagc
caacacagtcatcacagaagctgtgaacactgctacacacgagtgggacccccagggcct
ccaggacctccaggtcctcatggctctcgaggattcccaggtttatctggttctaatggg
ctgcaaggtcagcggggtttacctgggcggcctggtgtccctggcatgaaaggtgatcca
ggagaaaagggtgagaaaggaaatcaaggacgctcacaaattggagacccaggtctccca
ggaccaccaggtccaatgggtccaccaggggtcggaaaaacgggtcacccaggtaagcca
ggcccacctggtcacaacggcgaggagggtaagagggggcaccccggcgagcccggtcag
ccaggcgtgtgccatccctccatgtgctacagcgcaatgttgcgaagagatcctttcagt
aaagggccaaactattga
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