Oleiphilus messinensis: OLMES_0838
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Entry
OLMES_0838 CDS
T04860
Name
(GenBank) 23S RNA-specific pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ome
Oleiphilus messinensis
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ome03009
]
OLMES_0838
Enzymes [BR:
ome01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
OLMES_0838
Ribosome biogenesis [BR:
ome03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OLMES_0838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
KDM5_C-hel
Motif
Other DBs
NCBI-ProteinID:
ARU54930
UniProt:
A0A1Y0I3W8
LinkDB
All DBs
Position
913211..914281
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AA seq
356 aa
AA seq
DB search
MSDSDQFENTSNDSPSMDTVADEADPNQDDDFNAGSDALEVIHAEFAIPLDLAEKRLDQA
VAAFMPEHSRGRIQGWIKSGALTLNGAAAKAKDKVIVNDKVAIRAEIEGLERWSPEAIPL
DIVFEDEHILVVNKPVGLVVHPAAGHPRGTLVNALLHHCPEVDKLPRAGIVHRLDKDTSG
LMVVAKSLIAHTSLVNQLQDRSMGREYEAIACGMMTGGGTVHEPISRHPHNRLKMAVHPT
GKDAVTHYRVLEKFAAFTHIHCKLETGRTHQIRVHLAHIHHPLVGDPIYGGRLKLPSGAN
EEITTLLRSFTRQALHARRLQLIHPASQELLYWEVDLPDDMLQLLEGIRKFDAQRG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgatcaatttgaaaatacgagcaatgactcaccctcaatggataccgtc
gctgatgaggcagacccgaatcaagatgatgactttaatgcgggttctgacgcacttgaa
gtgatacatgccgagtttgcaattccgctggatcttgcagaaaaacggctggatcaggct
gtagctgcatttatgccagagcactccagaggtcgaatccagggttggatcaaaagtggg
gcgctcactctcaatggcgctgcggcgaaagctaaagataaagttattgtcaatgacaag
gtggccattcgggctgaaatcgagggattggagcgttggagtcccgaggccatcccgctg
gatatcgtatttgaggatgagcatatactggtggtgaacaagccggtggggctcgtggtt
caccccgctgcaggtcatccgcgtggcacgctggttaatgccttattacatcattgtccg
gaggtcgacaaactgcccagagcgggtattgttcaccggcttgataaagataccagtggt
ttaatggtggttgcaaagtctctcatcgcccacacttcattagtgaatcagttacaggac
cgctcaatggggcgggagtatgaagcgattgcctgtggcatgatgacgggtggggggacg
gtgcatgagccgatttcacgacacccccataaccggttgaaaatggccgtacaccctact
ggtaaagatgccgttacacactatcgggtactggaaaaatttgctgcgtttacacatatc
cattgcaagttagaaaccgggagaacacatcaaattcgagttcatctggcccatatccat
cacccgctggtcggagacccgatttatggtgggcgattgaaattgccatcaggtgccaac
gaggaaattacaacgctgttgcgaagcttcacccgtcaggcgctccatgctcgaaggctg
cagctgattcatcccgcatcccaggagctactgtactgggaagtcgacctgcctgacgat
atgctgcaactgttggaaggtatccgtaaatttgacgcacaacgaggttaa
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