Oryzias melastigma (Indian medaka): 112139826
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Entry
112139826 CDS
T07439
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
ApoLp-III
Baculo_IE-1
zf-ANAPC11
zf-RING_10
U-box
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
112139826
NCBI-ProteinID:
XP_024118432
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MQNSEGGTSLCLETEREIKHSLKDTEMAQQTFLDKEKLICSICLDLQKDPVTIPCGHSYC
LECIQNFWGEEQKALSCPQCRQSFTSRPVLVRNTILAELVEDARKAELQPSSSERSLTGP
EHVDCDFCEGKKLKAAMSCLTCLASYCEQHLQPHFRVAGLKKHKLVKATLKLQENICPCH
NEEIKIFCRTDQKCICILCSMDEHKGHDMVSAAAERAERQTKLGLDRQKVQERILKLEED
LEELQQTVETINLSAEKSIKESQNVFKGLIRLLEQKCSEVEQKVKSYQMEEVRKVEELQE
KMQQEITKLRKTEAELDQLSSTEDHLHFLNNYSSLSDLSVCTDLASFQQAQHCFDDALKA
VSEATEKLEETLRDQTTKISHTLDVILFEDFRSREDFMKYYHQITLDPNTANTRLSLSEQ
NRTATWTKVEQKYSNHPDRFVERWQVLSAEGLTGRCYWEVEWSGEVFVSVAYKDISRTGT
CDECGFGYNNKSWALRCSSTGYKFYHNKISVSISAPQSSRVGVYLNHRAGTLSFYSVSDS
MTLIHKVQTTFTQPLYAGFGFSSNNEGKIRSVSEATEKLEETLREQISDILDVFLPEDFR
SREDFMKYYHQITLDPNTANKYLSLSEQNRTATWTFVEQKYSNHPDRFVQLYQVMSTEGL
TGRCYWEVEWSGGVYVSVAYKDISRTGTVDECVFGFNDKSWSLECSFTGYEFYHNKISVS
ISAPQSSRVGVYLNHRAGTLSFYSVSDSMTLIHKVQTTFTQPLYAGFRIWSGGMIRLLD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtgaaggaggaacaagtctttgtctagaaacagaaagagagattaaacat
tcactgaaggacacagaaatggcgcagcaaacttttctggataaagagaagctgatctgt
tcgatctgtttggatctgcagaaggatccggtcactattccttgtggtcacagttactgt
ctggaatgtatccagaacttctggggagaggaacaaaaagctctcagctgtcctcagtgc
agacaaagcttcacttcaaggcctgtcctggtaagaaacactattttagcagagttggtg
gaggacgcaagaaaagcagagcttcaaccgtcttcatctgagcgttctctaactggacca
gaacatgtcgactgtgatttctgtgaaggaaagaagctgaaagctgccatgtcttgtctg
acctgtttggcttcttactgtgagcagcacctccagccccattttagggttgctgggtta
aagaagcacaagctggtcaaagccactctaaagcttcaggagaacatctgtccttgtcac
aatgaggaaatcaagatcttctgccgcactgatcaaaagtgtatttgtattctctgctcc
atggatgaacacaaaggtcatgacatggtgtctgctgcagcagaaagggctgaaagacag
acaaagctgggactggatcgacaaaaagtccaagagagaatcctcaagttagaagaagat
ttagaagagcttcagcagacggtggagaccatcaatctgtctgctgagaaaagcatcaaa
gaaagtcagaacgtcttcaaaggtttgatccgtctcttggagcaaaaatgctcagaagtg
gagcagaaggtcaaatcctatcagatggaggaagtgaggaaagtggaagaactccaggag
aagatgcagcaggagatcaccaaactgaggaaaacagaggctgagctggaccagctctca
tctacagaagatcatctccattttctcaacaactactcctccctgtcagatctgagtgtc
tgtacagacttagccagctttcaacaagctcagcactgctttgatgatgctctcaaagct
gtgtctgaggccacagagaagctggaggagactctcagagaccagaccacaaagatttca
cacacactggatgttattctgtttgaagacttcagatccagagaggacttcatgaagtac
tatcatcagatcacactggatccaaacacagcaaacacacgtctatctctgagtgaacag
aacagaacagcaacatggacaaaagtagagcagaaatattcaaatcatccagacaggttt
gttgaaaggtggcaggttctgagtgcagaaggtctgactggacgttgttactgggaggtg
gagtggagcggggaggtttttgtgtcagttgcatacaaagatatcagtcgtacaggaacc
tgtgatgaatgtgggtttggatataataataaatcctgggcattgaggtgttcatccact
ggatataaattttaccacaacaagatcagtgtttctatttcagctcctcaatcctccaga
gttggagtttatttaaatcacagagcaggaactttgtctttctacagcgtttctgactcc
atgactctcatacacaaagtccagaccacattcactcagcctctgtatgctggatttggg
ttttcatcaaataatgaaggcaaaatcaggtctgtgtctgaggccacagagaagctggag
gagactctcagagagcagatttcagacatactggatgtttttctgcctgaagacttcaga
tccagagaggacttcatgaagtactatcatcagatcacactggatccaaacacagcaaac
aaatatctatctctgagtgaacagaacagaacagcaacatggacatttgtagagcagaaa
tattcaaatcatccagacaggtttgttcaattgtatcaggttatgagtacagaaggtctg
actggacgttgttactgggaggtggagtggagcgggggggtttatgtgtcagttgcatac
aaagatatcagtcgtacaggaaccgttgatgaatgtgtgtttggatttaatgataaatcc
tggtcattagaatgttcattcactggatatgaattttaccacaacaagatcagtgtttct
atttcagctcctcaatcctccagagttggagtttatttaaatcacagagcaggaactttg
tctttctacagcgtttctgactccatgactctcatacacaaagtccagaccacattcact
cagcctctgtatgctggattcaggatttggtctggaggaatgatcaggttgttggattga
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