Oryzias melastigma (Indian medaka): 112140167
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Entry
112140167 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112140167
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112140167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
SPRY
zf-RING_5
Prok-RING_4
zf-RING_10
zf-RING_6
Gp58
U-box
C5HCH
DUF848
Motif
Other DBs
NCBI-GeneID:
112140167
NCBI-ProteinID:
XP_024118823
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQKGVDLDEETFSCSICLDLLKDPVTIPCGHNYCMKCIRGFWDGKEKIYSCPQCRKTFK
PRPVLVKNFMFAALVEQLKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLFCLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICFICSVDEHR
GHDTVLAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQELEAINHYADQTLKDTEEN
FTQMINLIQKRSCDVKQQIISQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTPSSSINVRPLTYFEEVTAAVSDLRDKLQDLLREERTNISATVT
YVDVLLPEPEPASRADFLKYACQITLDPNTANKRMLLSDENRKVTFKEQHESDSHPDRFT
DYLQVLSRESLTGRCYWEVERRGFAVFIAVAYKDISRSGKESRFDLSDKSWAFFCSPNRF
SFYHNGIKNSISARVSSRIGVYLDHRAGLLSYYSISERMTVLHRAQTTFTQPLYAGVWMN
DIVGDSAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatgaagaaaccttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacaactactgcatgaagtgtattcga
ggattctgggacggaaaggagaaaatctacagctgtcctcagtgtaggaagaccttcaaa
ccgagacctgttctggtgaaaaattttatgtttgcagctttagtggagcagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatttctgctctggaagaaaactgaaagccatcaagtcctgtttgttctgtctggcctct
tactgtgagaaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgtactgatcagaagtgtatctgttttatctgctctgtggatgaacataga
ggacatgacacagtcttagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggagctggaggccatcaatcactatgctgatcaaacattgaaagacactgaggagaac
ttcactcagatgatcaatctcatccagaaaagaagctgtgatgtgaagcagcagatcata
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacaccctcatcc
agcatcaatgtccgtcctctgacatactttgaggaggtgacagcagctgtgtcagacctc
agagacaaactgcaagaccttctgagagaggaacggacaaacatctcagcgacagtcact
tatgtggatgttttactgccagaaccagaaccagcaagcagagctgacttcttgaaatat
gcatgtcaaatcacactggatccaaacacagcaaacaaacgaatgttactgtcagatgag
aacagaaaggtgacatttaaggaacaacatgagtctgattctcatccagacagatttact
gattatcttcaggttctgagtagagagagtctgactggacgttgttactgggaggtggag
aggagaggatttgctgtttttatagcagtcgcatacaaggacatcagtagatctggaaaa
gaaagtagatttgatttaagtgacaaatcttgggcctttttttgttctccaaacagattt
tcattttaccacaacggtataaaaaactcaatctcagctcgtgtttcctccagaatagga
gtgtacctggatcacagagcaggtcttctgtcctactacagcatctctgaaagaatgact
gtcctccacagagcccagaccacattcactcagccgctctatgctggagtgtggatgaat
gatattgttggagactcagcagagttctgtaaactcaaatag
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