KEGG   Oryzias melastigma (Indian medaka): 112142935
Entry
112142935         CDS       T07439                                 
Symbol
fbxo40.1
Name
(RefSeq) F-box protein 40.1
  KO
K10315  F-box protein 40
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112142935 (fbxo40.1)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     112142935 (fbxo40.1)
SSDB
Motif
Pfam: F-box_4 zf-TRAF_2 F-box F-box-like Sina_ZnF zf-TRAF
Other DBs
NCBI-GeneID: 112142935
NCBI-ProteinID: XP_024122388
Ensembl: ENSOMEG00000008690
LinkDB
Position
LG14:19186455..19193115
AA seq 697 aa
MSHRSRASRQRQHVHCDSCYSRRCRARVEASVCCPLSPCRLLCGALYHLCKEEDHLLLCP
NVRVPCLNAEYGCPVQLPRSSRAAHLQMCPASVVCCSMEWNRWPVNDAHSHPNTELHENL
LKEQNGCLDLALALKDQQRLFHSIKMKKLFPELLQSVEEEEREEERMKEERRKEQEKKKA
LIEKEAAERAAAKEASQALWESFNKFNINFPSEKESEDDAEDENQPALSQEEREALARAS
DVDADNLENYNVWERMFSMEMGGCRQAEATTAAGKEKSKQNRKGLDTLTEEDEAAASGSS
KLPSGACSTSSSSCSAEKPKKIFVYGHVEPMKIITVRTFKVPTSFAARQSRIRNPGFYKR
ESKAVDTSDLGVGADSIPVWEEVQASLLCSLEKERRGHLIAETVSSDSLLTDEGTQTYNF
LSAPFGKNLSLIDLTAGKPLELHLQLQVESVTSRHHKANSTFTFVCGHTFQRREYGKHYK
NIHCDIQMCVNGWFEQRCPLAYLGCTYSQNRFQPSTHEATVNYNTDLGCFGLHPTVPASM
TDSSGVQKRRGGQNEGGEGSLSSLPYEVLWHIAGFLDSLSLSQLALVSPLMRQVCWSLLQ
ERGMVTLCWEKTSSHGKIRWKVKQKVWQFSTLFSPVDAWCFRNVPSISEHLKVCPYNKIE
PKTEKIRLPRVKKETESNTSCKNSTLVNLFQQKRILM
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgagtcatcgttctcgagcctccaggcagcggcagcacgtccactgcgattcctgttac
agccggcgctgcagagctcgggtggaggcctcagtgtgctgtccgctcagcccctgccgt
ctactctgcggcgccctctaccacctgtgcaaggaggaggatcacctgctgctctgtccc
aacgtgagggtaccctgcctcaatgcagagtacggctgtccggtccagctgccgcgctcc
tccagggcggctcacctccagatgtgtccggccagcgtggtgtgctgctccatggagtgg
aaccgctggccggtcaacgatgcccattctcaccccaacacagagctgcatgagaacttg
ctgaaagagcaaaacggatgtcttgaccttgctttggccctgaaagaccagcagcggcta
tttcactccataaagatgaaaaagttgttcccagagctacttcagagtgtagaggaagaa
gagagagaagaggaaagaatgaaagaggaaaggagaaaggaacaagagaagaagaaagct
ttaatagagaaggaggcagcagagagggcagctgcgaaagaagcaagtcaggcactttgg
gagtcttttaacaagttcaacatcaatttccccagtgagaaagagagtgaagatgatgct
gaggatgaaaaccagccagcgctcagtcaggaagaacgggaggctcttgccagggcctca
gacgtggatgccgataatttggaaaactacaatgtctgggagcgcatgttcagtatggag
atgggtggctgccgtcaggccgaagcgaccactgcagcaggaaaagaaaagagtaaacag
aatagaaaaggtctggatactctgacagaagaagacgaggcggcagcatctggcagctcc
aaactaccatctggtgcatgttctacatcctcttcctcatgttctgctgaaaaacccaag
aagatctttgtgtacggacacgtggagccgatgaagatcatcacagtgcgcacctttaaa
gtcccaaccagctttgctgcaaggcaaagccgcatccgcaatcctggattctacaagagg
gaatctaaggctgtggataccagtgatctgggagtgggagcggacagcataccggtgtgg
gaggaagttcaggcttccttgctgtgctctttggagaaagagcgtaggggtcacctcatt
gcagagaccgttagctcagacagcctgttgacagacgaaggcacgcagacctacaacttc
ctgtccgctccttttgggaaaaacttgtccctgattgacctgacagcgggaaaaccgctg
gagctgcaccttcagctgcaggtggagagcgtcaccagtcgacaccacaaggcaaactcc
acctttacctttgtctgtggacacactttccagcgcagagaatatggcaaacactataag
aacatccactgtgacattcagatgtgtgtgaacggctggttcgagcagcgatgccctctg
gcatacttgggatgcacctacagccagaataggtttcagccttcaacacatgaggccact
gtcaactacaatacagatctgggctgcttcggcctccatcccactgtgcctgcgtctatg
accgactcctctggtgtccagaagaggagaggaggtcaaaatgaaggaggagaaggctcc
ttaagctcccttccgtatgaggtgctatggcatatcgctggtttcctggacagcttgtct
ctgtcccagctggccttggtgtcccccctcatgaggcaggtgtgttggtctctgctgcag
gagagagggatggtcacgctctgctgggagaaaacctcctcccacgggaaaatcaggtgg
aaggtgaagcagaaggtttggcagttcagcactttgttctctcccgtggatgcttggtgt
ttccgaaatgtgccgtccatctcggagcatctaaaagtttgtccgtacaataagatagaa
cccaagacggagaagattcgcctccctcgtgtcaaaaaagaaaccgaaagtaatacaagc
tgcaaaaactccacactggtcaacttgttccagcagaagaggatactgatgtaa

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