Oryzias melastigma (Indian medaka): 112142935
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Entry
112142935 CDS
T07439
Symbol
fbxo40.1
Name
(RefSeq) F-box protein 40.1
KO
K10315
F-box protein 40
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112142935 (fbxo40.1)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
112142935 (fbxo40.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
Sina_ZnF
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
112142935
NCBI-ProteinID:
XP_024122388
Ensembl:
ENSOMEG00000008690
LinkDB
All DBs
Position
LG14:19186455..19193115
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AA seq
697 aa
AA seq
DB search
MSHRSRASRQRQHVHCDSCYSRRCRARVEASVCCPLSPCRLLCGALYHLCKEEDHLLLCP
NVRVPCLNAEYGCPVQLPRSSRAAHLQMCPASVVCCSMEWNRWPVNDAHSHPNTELHENL
LKEQNGCLDLALALKDQQRLFHSIKMKKLFPELLQSVEEEEREEERMKEERRKEQEKKKA
LIEKEAAERAAAKEASQALWESFNKFNINFPSEKESEDDAEDENQPALSQEEREALARAS
DVDADNLENYNVWERMFSMEMGGCRQAEATTAAGKEKSKQNRKGLDTLTEEDEAAASGSS
KLPSGACSTSSSSCSAEKPKKIFVYGHVEPMKIITVRTFKVPTSFAARQSRIRNPGFYKR
ESKAVDTSDLGVGADSIPVWEEVQASLLCSLEKERRGHLIAETVSSDSLLTDEGTQTYNF
LSAPFGKNLSLIDLTAGKPLELHLQLQVESVTSRHHKANSTFTFVCGHTFQRREYGKHYK
NIHCDIQMCVNGWFEQRCPLAYLGCTYSQNRFQPSTHEATVNYNTDLGCFGLHPTVPASM
TDSSGVQKRRGGQNEGGEGSLSSLPYEVLWHIAGFLDSLSLSQLALVSPLMRQVCWSLLQ
ERGMVTLCWEKTSSHGKIRWKVKQKVWQFSTLFSPVDAWCFRNVPSISEHLKVCPYNKIE
PKTEKIRLPRVKKETESNTSCKNSTLVNLFQQKRILM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgttctcgagcctccaggcagcggcagcacgtccactgcgattcctgttac
agccggcgctgcagagctcgggtggaggcctcagtgtgctgtccgctcagcccctgccgt
ctactctgcggcgccctctaccacctgtgcaaggaggaggatcacctgctgctctgtccc
aacgtgagggtaccctgcctcaatgcagagtacggctgtccggtccagctgccgcgctcc
tccagggcggctcacctccagatgtgtccggccagcgtggtgtgctgctccatggagtgg
aaccgctggccggtcaacgatgcccattctcaccccaacacagagctgcatgagaacttg
ctgaaagagcaaaacggatgtcttgaccttgctttggccctgaaagaccagcagcggcta
tttcactccataaagatgaaaaagttgttcccagagctacttcagagtgtagaggaagaa
gagagagaagaggaaagaatgaaagaggaaaggagaaaggaacaagagaagaagaaagct
ttaatagagaaggaggcagcagagagggcagctgcgaaagaagcaagtcaggcactttgg
gagtcttttaacaagttcaacatcaatttccccagtgagaaagagagtgaagatgatgct
gaggatgaaaaccagccagcgctcagtcaggaagaacgggaggctcttgccagggcctca
gacgtggatgccgataatttggaaaactacaatgtctgggagcgcatgttcagtatggag
atgggtggctgccgtcaggccgaagcgaccactgcagcaggaaaagaaaagagtaaacag
aatagaaaaggtctggatactctgacagaagaagacgaggcggcagcatctggcagctcc
aaactaccatctggtgcatgttctacatcctcttcctcatgttctgctgaaaaacccaag
aagatctttgtgtacggacacgtggagccgatgaagatcatcacagtgcgcacctttaaa
gtcccaaccagctttgctgcaaggcaaagccgcatccgcaatcctggattctacaagagg
gaatctaaggctgtggataccagtgatctgggagtgggagcggacagcataccggtgtgg
gaggaagttcaggcttccttgctgtgctctttggagaaagagcgtaggggtcacctcatt
gcagagaccgttagctcagacagcctgttgacagacgaaggcacgcagacctacaacttc
ctgtccgctccttttgggaaaaacttgtccctgattgacctgacagcgggaaaaccgctg
gagctgcaccttcagctgcaggtggagagcgtcaccagtcgacaccacaaggcaaactcc
acctttacctttgtctgtggacacactttccagcgcagagaatatggcaaacactataag
aacatccactgtgacattcagatgtgtgtgaacggctggttcgagcagcgatgccctctg
gcatacttgggatgcacctacagccagaataggtttcagccttcaacacatgaggccact
gtcaactacaatacagatctgggctgcttcggcctccatcccactgtgcctgcgtctatg
accgactcctctggtgtccagaagaggagaggaggtcaaaatgaaggaggagaaggctcc
ttaagctcccttccgtatgaggtgctatggcatatcgctggtttcctggacagcttgtct
ctgtcccagctggccttggtgtcccccctcatgaggcaggtgtgttggtctctgctgcag
gagagagggatggtcacgctctgctgggagaaaacctcctcccacgggaaaatcaggtgg
aaggtgaagcagaaggtttggcagttcagcactttgttctctcccgtggatgcttggtgt
ttccgaaatgtgccgtccatctcggagcatctaaaagtttgtccgtacaataagatagaa
cccaagacggagaagattcgcctccctcgtgtcaaaaaagaaaccgaaagtaatacaagc
tgcaaaaactccacactggtcaacttgttccagcagaagaggatactgatgtaa
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