Oryzias melastigma (Indian medaka): 112143393
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Entry
112143393 CDS
T07439
Name
(RefSeq) NLR family CARD domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
TBCA
Motif
Other DBs
NCBI-GeneID:
112143393
NCBI-ProteinID:
XP_036071596
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Position
LG16:complement(402856..425964)
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AA seq
1277 aa
AA seq
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MKESEEKEETSQSSTHGPPEEHENHHQPERIEVERDYSSSSSVSVISHMSKDSPLGFNNE
VKKIELEKKDFSSSSLSLSSDMSKDSPLGFNKEVKKIELERKDFSSSSLSLSSDMSKDSP
LGFNKEVKKIGLEKKDFSSSSLSLSSDMSKDSPLGFNKDLKIELERKDFSSSSLSLSSDM
SKDSPLGFNKDLKIELERKDFSSSSLSLSSDMSKDSPLGFNKDLKKIEMERDYSPSSSVS
VISHMSKDSPLGFNKEVKKIELERKDFSSSSLSLSSDMSKDSPLGFNKDFKKIEMERENS
PSSQVSVISHRSKDSPLGFNKEVKKINQNIPESRTRQEKMVLEETVSVYKDTVEKMSSSI
SLLQMSIKKKFESIYKEEHTVFLSQIYTELYITEGRPAEVNREHEIRQLERAFRKSDRPE
TTIKPEDVCKPPPGRNKPIRTAITMGIAGIGKTVLTNKFALDWAEGKTNQDIQFLFLFSF
RELNLLKEKKFSLVELIHHFYSETKGFSHFEEFKVLLIFDGLDECRFPLNLNSTEILTDV
TQPASLGVLLTNLIKGKLLPSAQLWITTRPAAASVIPPECVDMVTEVRGFNDSQKEEYFR
KQFREDEDQAITVYSQIKKCRSLHIMCHIPVFCWISATVLDELLKREEQRETPRSLTEMY
IHFVLIQIQMKNMKYDGGSETDSVWNPQTRNMILSLGKLAFEQLQKGNLFFYESDLTESG
IDVRAASVCSGVFTQIFKEESGLYQGRVFCFVHLSVQEFLAALYVHFTFFQTGKNLLEEQ
PGPGWFDWLKGKMNPVSISFYQSAIDKALQSPNGHLDLFLRFLLGLSQPNSQVLLKGLLQ
QTEADSTVISETVQHIKKKLRKQDSVEKSINLFHCLKELQDCSLTEEIQQNLISGSLSPN
EMSTTEWSALVFILLSSEEILKEFELKKYFASDVGVQRLLPVIKESSRAVLSCCNLSEKS
CEVLASVLSSESCSLKDLDLSNNDLKDSGLKWLCEGLQSPHCQLETLRLSGCLITKTGVD
YLAKALNSNHSHLKELDLSFNHPGESGVNVLMEGWKDQAWALNIFKMKPRGPKFMKPGLR
KYAVDLTLDENTAHRNLILRNYNKTVMMEKEKQAYPDHSERFSYWKQVLCTEGLTGRCYW
EVEWKGEVYIAVTYRGIRRKGESDNSGLGKNEKSWSLLCSDESHSVLHNNISTAVHGVPS
SRVGVYLDSDAGTLSFFKVCLDKVIHLHTFKTTFSEPVYPAFRIRTEPFNSSLTLCYIYH
DKQNETRGLMRQRLASR
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatcagaagagaaagaagagacttctcagtcttcaactcatggtccacctgaa
gaacatgaaaaccaccaccaacctgagagaattgaagtggaaagagactattcttcatca
agctctgtgtccgtaatcagtcacatgtccaaggattctcctctaggtttcaacaacgaa
gtaaaaaaaattgagttggaaaaaaaagatttttcatcaagctctttgtccctgtcaagt
gacatgtcaaaggattctcctcttggtttcaacaaagaagtaaaaaaaattgagttggaa
agaaaagatttttcatcaagctctttgtccctgtcaagtgacatgtcaaaggattctcct
cttggtttcaacaaagaagtaaaaaaaattgggttggaaaaaaaagatttttcatcaagc
tctttgtccctgtcaagtgacatgtcaaaggattctcctcttggtttcaacaaggacttg
aaaattgagttggaaagaaaagatttttcatcaagctctttgtccctgtcaagtgacatg
tcaaaggattctcctcttggtttcaacaaggacttaaaaattgagttggaaagaaaagat
ttttcatcaagctctttgtccctgtcaagtgacatgtcaaaggattctcctcttggtttc
aacaaggacttaaaaaaaattgaaatggaaagagactattctccatcaagctctgtgtcc
gtaatcagtcacatgtccaaggattctcctcttggtttcaacaaagaagtaaaaaaaatt
gagttggaaagaaaagatttttcatcaagctctttgtccctgtcaagtgacatgtcaaag
gattctcctcttggtttcaacaaggactttaaaaaaatcgagatggaaagagaaaattcc
ccatcaagccaagtgtctgtaataagtcacaggtccaaggattctcctctcggtttcaac
aaggaagtaaaaaagattaaccagaacattccagagagtcgaacaagacaagaaaaaatg
gttcttgaagaaacagtctcagtttacaaagacacagttgaaaaaatgtcatcatcaatc
agtcttcttcaaatgagcatcaaaaagaagtttgaaagcatatacaaagaagaacataca
gtctttctgagtcagatctacacagagctgtacatcactgaaggaaggcctgcagaggtc
aacagagaacatgaaatcagacagcttgaaagagcattcagaaaatcagacagaccagaa
acaacaatcaaacctgaagacgtctgcaagccaccacctggaagaaacaaaccaatcaga
acagcgatcacaatgggaatagccggcatcgggaaaacagtcttaacaaacaagtttgct
ctggactgggctgaaggcaagaccaaccaggacatccagttcttatttctgttttctttc
agagaactcaatcttttaaaggagaagaagttcagtctggtggaactcatccatcatttt
tattcagaaactaaaggtttcagccactttgaagagttcaaggttctgttgatctttgat
ggtctggatgagtgtcggtttcctctgaacctgaacagcacagagatcctgactgatgtt
acacaacctgcatctctgggagtcctgctgacaaacctcatcaaggggaagcttcttccc
tctgctcagctttggataaccacacgacctgcagcggccagtgtgatcccacctgagtgt
gttgacatggtaacagaggtcagagggttcaacgactcacagaaggaggaatactttagg
aaacaattcagagaagatgaggatcaagccatcacagtttactcccagatcaagaagtgc
agaagcctccacatcatgtgccacattccagtcttctgctggatctctgcaacagttctg
gacgagctgctgaaaagagaagagcaaagagagacacccagatccctgactgagatgtac
atccactttgtgctgatccaaattcaaatgaagaacatgaagtatgatggaggatctgag
acagattcagtgtggaatccacaaaccaggaatatgatcttgtctttgggaaagctggct
tttgagcagcttcagaaaggaaacttgttcttctacgagtctgacctgacagagagtgga
atcgacgtcagagccgcctcagtgtgttcaggagtgttcacacagatcttcaaggaggag
agtggactctatcagggccgggtgttctgctttgttcacctgagtgttcaagagtttctg
gctgctctgtatgtccacttcacatttttccagacaggcaagaacctgttagaagagcaa
ccaggtcctgggtggtttgattggcttaaaggtaaaatgaatcctgtttccatctccttt
taccagagtgctatagacaaagctctgcagagtccaaacggacacctggacctcttcctg
cggttcctcctgggtctctcacaaccaaacagccaggttctcctaaaaggacttttacaa
caaacagaagcggactcaactgtgatttcagaaacagttcagcacatcaagaagaagtta
cgtaaacaggattctgttgagaaaagcatcaacctgtttcactgcctgaaggagctgcag
gattgttctttgactgaggagatccagcaaaacctcatctcaggaagtctttctccaaat
gaaatgtctacaactgagtggtcagctctggtcttcatcctgctgagttcagaagaaatc
ctaaaagagtttgaactgaagaaatactttgcttcagatgtgggcgtgcagaggctgcta
cccgtgatcaaagaatccagcagagctgttctgagttgctgtaacctgtcagagaaaagc
tgtgaggttctggcttcagttctcagctctgagtcttgcagcctgaaggatctggacctg
agcaacaacgacctgaaggattcaggactgaagtggctctgtgaaggactgcagagtcca
cactgccaactggaaaccctcaggctctcagggtgtctcatcacaaagactggtgttgac
tatctggcaaaagcactgaactccaaccactcacacctgaaggagttggacctgagcttc
aatcatccaggagaatctggagtgaatgtccttatggaaggatggaaggatcaagcctgg
gctttgaacattttcaagatgaaaccacgaggacccaagttcatgaagcctggtttaagg
aagtatgctgttgatctcacgctggatgaaaacacagctcacagaaacctcatactgaga
aattacaacaagacagtgatgatggagaaagagaaacaggcatatcctgatcattcagag
aggttttcttactggaaacaggtgttgtgcacagaaggcctgactgggcgctgttactgg
gaggtggagtggaaaggggaggtttacatcgctgtgacttacagaggaatcagaaggaag
ggagaaagtgacaacagtggacttgggaagaatgaaaaatcctggagcctgctgtgttct
gatgaaagtcactctgtcctccacaataatatcagcactgcagtccatggagttccttcc
agcagagtgggagtctatctggactcagatgctggtactttgtctttcttcaaggtctgc
ttggacaaagtgatccaccttcacaccttcaagaccacattcagtgagccagtctaccct
gctttcaggatcaggactgaacccttcaactcgtctctgaccttgtgttacatttatcat
gacaaacaaaatgagacaagaggtttgatgagacagagactggctagccgttaa
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