KEGG   Oryzias melastigma (Indian medaka): 112143854
Entry
112143854         CDS       T07439                                 
Symbol
sdha
Name
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml00020  Citrate cycle (TCA cycle)
oml00190  Oxidative phosphorylation
oml01100  Metabolic pathways
oml01200  Carbon metabolism
Module
oml_M00009  Citrate cycle (TCA cycle, Krebs cycle)
oml_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oml_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    112143854 (sdha)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    112143854 (sdha)
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     112143854 (sdha)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Thi4 GIDA Pyr_redox_2 DAO FAD_binding_3
Other DBs
NCBI-GeneID: 112143854
NCBI-ProteinID: XP_024123839
Ensembl: ENSOMEG00000017294
LinkDB
Position
LG16:11758813..11765464
AA seq 663 aa
MASVRAASRLLSRRTISHVKAVPAAAVQSSRNFHFSIYGKKKNAKVSDDISTQYPVVDHE
FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDDWRW
HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKIYQRAFGGQSLKYG
KGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGQCKGVIALCMED
GSIHRFRAQNTVIATGGYGRTYFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIY
GAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPEK
DHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQV
IDYTDGKDTVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTIANEHKPGEKL
SPLKPSAGEESVANLDKLRFANGSLRTSEIRLNMQKTMQNHAAVFRTGSVLKEGCDKMDD
IYQTMEQIKTFDRGIVWNTDLVESLELQNLMLNAVQTINSAEQRKESRGAHAREDFRDRV
DEFDYSKPLQGQEKKPFDQHWRKHTLSYVDPKTGKVTLKYRPVIDTSLDEQDCAHVPPAI
RSY
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcgagtgttcgcgctgcgtctcgtctcctctccaggaggacgatttcacacgttaaa
gcagttcctgctgctgccgttcaaagttcaaggaactttcacttctccatctacggaaaa
aagaagaatgccaaagtttcagatgacatatccactcagtatccagtggtggaccacgag
tttgacgcggtggtagtgggagcaggaggagcggggctgcgggcagctttcggcctgtcc
gaggccggctttaacaccgcctgcgtcaccaagctcttccccaccagatctcacactgtt
gctgcacagggtgggatcaatgcggctctgggaaacatggaggacgacgactggaggtgg
catttctatgacacagtaaagggatctgactggctcggagaccaggatgctatccattac
atgacggagcaggctcccgctgctgtcgtggagttggaaaattttggcatgccgttcagc
cggactgaagacgggaagatctaccagagagccttcggaggtcagagtctcaagtatgga
aaaggaggtcaggctcatcgctgctgctgtgtagcagatagaacaggacactcgctcctg
catactctttatggaaggtcccttcgttatgacaccagctactttgtggagtactttgct
ctagacctgctgatggaagatgggcagtgcaaaggagtgatagctctctgcatggaggat
ggatccatccaccgcttcagagcccaaaacaccgtcatcgctacaggaggttatggaaga
acgtatttcagctgcacatctgcccacacaagcacaggagacggaaacgccatggtgacc
agagctggcctgccctgtcaggacttggagtttgtgcagtttcaccccactgggatctac
ggagccggttgcctgatcacagaaggctgccgtggtgaaggaggaatcttgatcaacagt
gagggagagcgcttcatggagcgctacgctcccaacgccaaagacctggcctccagagac
gtggtgtcccgctccatgaccatagagatccgggagggcaggggtgtcggtccagagaag
gaccacgtgtacctgcagcttcaccacctgcctcctcagcagctggccacaaggctgccc
gggatctcggagacggcgatgatctttgctggagtggacgtcaccaaagagcccatcccc
gtcctgcccacagttcactacaacatgggaggaatccccacaaactacaaaggacaggtg
atcgattacacagacggtaaggacacagtggtgcctggactttacgcctgcggtgaggca
gcttgtgcgagcgttcatggcgccaacaggctgggcgccaactccctgctggacttagtt
gtgtttggaagagcctgtgccctcactattgctaacgagcacaaacctggagagaagctg
tcccctctgaaacccagcgcaggagaggagtctgtggccaacctggacaagctccggttt
gcaaatggaagtctgagaacctctgagatccgacttaacatgcagaagaccatgcagaac
cacgctgcagttttccgtaccggctccgtcctcaaagaaggatgcgataagatggacgac
atttaccagaccatggagcaaataaagacctttgacagaggcattgtgtggaacacagac
ctggtggaatccttggagctgcagaacttgatgctgaatgcggttcagaccatcaactct
gccgagcagagaaaggagagcagaggagcccacgctagagaggacttcagagatcgcgtg
gatgagtttgattactccaagccgctgcagggtcaggagaagaaacccttcgaccagcac
tggaggaagcacacgctgtcatacgtcgaccccaaaactggaaaggtgaccctgaagtac
cgtcccgtcatcgacacctccctggatgagcaggactgcgctcacgttccccccgccatc
cgatcctattaa

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