Oryzias melastigma (Indian medaka): 112144295
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Entry
112144295 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112144295
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112144295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_10
DivIC
zf-RING_11
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
112144295
NCBI-ProteinID:
XP_024124547
LinkDB
All DBs
Position
LG17:12987574..12989416
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AA seq
554 aa
AA seq
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MAQKGVDLDQETFSCCICLDLLKDPATIPCGHSYCMKCIQGFWDGEEKIPCCPQCRKIFT
TRPVLVKNFMFAALVDQLKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLFCLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVEEHR
GHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTQMIRLIQKTSCDVKQQIRSQQQTEVSGVKDLQEELEQEITELKSKDAELKQLSLTEDH
SQFLLNYPSLPPLSESTYSSSINVRPLRYFEDVTAAVSELRDIMQELLREEWTNISLTVT
HVDVLLPEPEPKSRADFLRYSCQITLDPNTAHRQLLLSEENRKVTVMRQPQSDSDHPDRF
TDYLQVLSRESLTGRCYWEVELKGKYVRLSVAYKNISRSGDESIFGFNDKSWALDSSPDS
FSFHHNSIQTSISAPVSSRVGVYLDHRAGVLSFYSISESMTLLHRVQTTFSQPLHAGVLL
EYAVGTSAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatcaagaaaccttcagctgttgcatctgtctggat
ctgctgaaggatccagcgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctgggatggagaggagaaaattccctgctgtcctcagtgcaggaagatcttcaca
acgaggcctgttctggtgaaaaacttcatgtttgcagctttagtggatcagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatttctgctctggaagaaaactgaaagccatcaagtcctgtttgttctgtctggcctct
tactgtgagaaacaccttcagcctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggaagaacataga
ggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactcagatgatccgtctcatccagaagacaagctgtgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtggagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagagcaaagacgctgagctgaagcagctctcactcacagaggatcac
agccaatttctgctcaactacccctcactgccaccactcagtgagtccacatactcatcc
agcatcaatgtccgtcctctcagatactttgaggatgtgacagcagctgtgtcagagctc
agagacataatgcaggaacttctaagagaggaatggacaaacatctcactgacagtcact
catgtggatgttttactgccagaaccagaaccaaagagcagagctgacttcttaaggtat
tcatgtcaaatcacactggatccaaacacagcacacagacaactgttactgtcagaggaa
aacagaaaggtgacagtaatgagacaacctcagtctgattctgatcatccagacagattt
actgattatcttcaggttctgagtagagagagtctgactggacgttgttactgggaggtg
gagttgaaaggaaaatatgttcgtctatcagttgcttacaagaacatcagcagatctgga
gatgaaagtatatttggtttcaatgataaatcttgggcattagatagttctccagacagt
ttctcatttcaccacaacagcatacaaacctccatctcagctcctgtttcctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacagcatctctgaaagcatg
actctcctccacagagtccagaccacattctctcagcccctccatgctggagtgttgttg
gagtacgctgttggaacctcagcagagttctgtaaactcaaataa
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