Oryzias melastigma (Indian medaka): 112146284
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Entry
112146284 CDS
T07439
Symbol
trim35-12
Name
(RefSeq) tripartite motif-containing protein 35 isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112146284 (trim35-12)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112146284 (trim35-12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
U-box
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-Nse
zf-RING_10
Leu_zip
End3
zf-ANAPC11
zf-RING_6
zf-rbx1
OmpH
Motif
Other DBs
NCBI-GeneID:
112146284
NCBI-ProteinID:
XP_024127791
Ensembl:
ENSOMEG00000006561
LinkDB
All DBs
Position
LG8:complement(9860696..9864890)
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AA seq
518 aa
AA seq
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MALRPRASSNPGKLSLLQVPKAISSLRPRAVSSRSGSMLEEELSCPVCCEIFKEPVVLKC
SHSFCRACLQEFWNKKKARRECPICRRKCSLTEPTVSLALKNVADTFLREQERRAATTRD
GVKVVEMVEVTCATHGEAFKLFCMDDFEVLCFVCHTSKKHQGHRLCPVEEGAQDLRAGLK
EELTPLKKHLRRLYEAKQECDDTTVHIKNQTQATEKQIREEFQQLRDFLQREEEARLAAL
QQEDEEKKERVRKKSESITRDILTFSHAVIALENEIASDDVRFLQSYSSAKKRLEITQRD
PEKLSGVLINVAKHVSSLKYNVWEKMVDLVHYTPITLDPNTAYPWLSLSSDLTMVANTGF
LQQLPDNPERFGHFVFVLGSEGFVSGRHAWEVEVGDKIDWMLGVVKESIDRKGRISGCPE
GGFWMISHYEGEYLAMTRPSTPLCLEGPLTRVRVQMDYDAGEVAFSDPVSMKPIYTFNDF
FTEKMYPFFCPGSNIKGSNPKPLKICPVKVAVWNSAAW
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgccctcgagcttcctccaaccctggaaaactttccctcctccaggttccc
aaggccatttcatctcttcgaccgagggctgtctcctcgcgctcgggctccatgctggaa
gaggagctgtcgtgtcccgtctgctgcgagatcttcaaagaacctgtggtgctgaagtgc
agccacagcttctgccgggcctgtctgcaggagttctggaacaagaagaaggccaggcgc
gagtgtcccatctgtaggaggaagtgctctctgacggagcccaccgtcagtctggcgctg
aaaaatgtggcggacacatttctgagggagcaggagcggagggcagccacgactagagat
ggcgtgaaggtggtggagatggtggaggtgacgtgcgccacacatggggaggctttcaaa
cttttctgcatggatgactttgaagtcctgtgcttcgtgtgtcacacttccaagaagcac
cagggacacagactttgtcccgtggaggaaggagcccaggatctcagggcagggctaaag
gaagagctgacccctctaaagaaacatctgcgacgcctgtatgaagccaagcaggagtgt
gatgacacaacggtccacataaagaaccagactcaggccacagagaaacagatccgcgag
gagttccagcagcttcgagacttcctccagcgtgaagaggaggcgcggctcgccgctctg
caacaggaggatgaggagaagaaagagcgggtgaggaagaagtctgagagcatcaccaga
gacatcctgacgttttctcacgccgtcatcgccctggagaacgagatcgcatccgatgat
gttcgcttcctgcagagttactccagcgcaaagaaaagattagagatcacacagagagat
ccagagaagctgtcaggtgtccttataaatgtggccaagcatgtcagctccctgaagtac
aacgtttgggagaagatggtggatcttgtccactacacccccatcaccctagaccccaac
actgcgtacccctggctgtccctctcctctgacctcaccatggtggccaacactggcttc
ctccagcagctcccagacaaccccgagcgctttggccactttgtcttcgtgctcggatca
gagggtttcgtctccggccgccacgcctgggaggtggaggtgggagacaagatagactgg
atgcttggggtggtcaaggagtccatcgacagaaagggtcgcatctctggctgccccgag
ggcggcttctggatgatctcgcactatgagggcgagtacttggccatgaccaggccaagc
acgcctctgtgcttggaggggccgctgactcgagtcagggtgcagatggactatgacgcc
ggggaggtggccttctctgatcctgtgagcatgaagcccatctacaccttcaatgacttc
ttcactgaaaagatgtaccccttcttctgccccggatctaacatcaagggcagcaacccc
aagcctctgaaaatctgccccgtcaaggtggctgtgtggaacagtgcagcgtggtaa
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