Oryzias melastigma (Indian medaka): 112148172
Help
Entry
112148172 CDS
T07439
Symbol
rnf10
Name
(RefSeq) RING finger protein 10
KO
K26979
E3 ubiquitin-protein ligase RNF10 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148172 (rnf10)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112148172 (rnf10)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112148172 (rnf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
TRAF3_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
112148172
NCBI-ProteinID:
XP_024130785
Ensembl:
ENSOMEG00000017788
LinkDB
All DBs
Position
LG9:27100837..27109211
Genome browser
AA seq
786 aa
AA seq
DB search
MLESSAALFTELCLNTAHCTETNMEKNPNSSTKVPPRSTSTGPTPGESKPKTDGKNNGGS
KRYNRKREPSFPKAESFPGPRRTNPQKSKNFDKRPPQRGGGRQYGAAGGGRREEVAETRR
AEFSPAQFAGPKKISLNHLLNFTFEPRGGNGGIGDGGPSCWGRRNKWGHKNKPFNKELFL
QANCQFVVSDDQDYKAHFTDPDTLVNWDCVQQVRIYSHEVPSCPICLYPPVAARITRCGH
IFCWPCMLHYLSLSDKSWSKCPICYEAVHTADLKSVVAMETRQYVVGDVITMRLMRREKG
ALVAMPSSQWVKVEEPVRFEDACLSPYSKLLLTSPVQVLSLVTEEKAILQAQLSQEEEAQ
GCFIQNALCLLQEEEEKLLKQQMDTVNTPVFSSLSLNEPPPPVVEEVVTVISSSKPVLQY
SSAFDDEVEELTEETPAEVPNFPEPTLENEQEDPAESGMGAACEPQLDVVIPANQEESVR
PSTGVVHGPYYYFYQADDCQQMFLHPLNVRCLIREYGSLEACPDSITATVVEIVGHTVTE
DIRRRHRYLAHLPLTCEFSICELVLEPPVVSKETLDTFADDLEKRRRMRQKKVRDEKRRE
KRIEIEENKKQGKYPEVHIGLENLHHFPAFGSPPHNFSPPFQPDLSFAPPSPLSSSPPSD
GMRLLTPSLPSQTVGSLEDDSHCMSFAQMLRDGKARVDAGPRITPKKDKLLAPPAVDSDG
ESDGSERVPVPSFQNSFCQAFEKALLELDNGTASPPQAVVELDEKGGKKKKKKQKLLFST
SMVHTK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgctagagagctcggcggctctcttcacggagctctgcctaaacaccgctcactgcacg
gagacgaacatggagaaaaaccccaacagcagcaccaaggttccgccccgttccacttct
acgggtcctacaccgggcgaatctaaacccaaaacagatggtaaaaataatggcgggtcg
aaacgttacaaccgtaagcgtgagccctcctttcctaaagcagaaagttttcctggtccg
cgtcgcaccaatccacagaaaagcaaaaattttgacaagagaccccctcagagaggtgga
ggacgacagtatggagctgcaggtggaggacgacgtgaggaggtagcagagacacgccgg
gccgagtttagcccggctcagtttgctggacccaagaagataagcttgaaccacctgcta
aacttcacttttgaaccccgtgggggtaatggtggcatcggagacggaggcccctcctgt
tggggtcgccgtaacaaatggggccacaagaacaagcctttcaacaaggagctttttctg
caggccaattgtcagtttgtggtgtctgatgaccaggactacaaggctcacttcactgat
ccagacactctggtcaactgggactgtgtgcagcaagttcgcatctatagccatgaggtg
ccgtcctgccccatctgcctgtaccctcctgtggcagctcgcatcacccggtgtggacac
atcttctgctggccgtgcatgttgcactacctgtctcttagtgacaagagctggtccaag
tgtcccatctgctacgaggccgtgcacactgcagacctgaagagtgtggttgctatggag
acacggcagtatgtggttggagatgtcatcaccatgcgcctaatgagaagagaaaagggc
gctctggtggccatgccaagctcccagtgggtgaaggtggaggagcccgttcgctttgaa
gatgcttgtttgagcccgtactccaagctgcttctcacctcaccggtgcaagttttgagc
ctggtcacagaggagaaggcgatcctgcaggctcagctgagccaggaggaggaagctcaa
ggctgcttcatccagaatgctctttgtcttttgcaggaggaggaagaaaaactcctgaag
cagcaaatggacactgtcaatacccctgtcttttcctctctgtctctgaatgaacctcct
ccccctgttgttgaggaagtggtcactgtcatcagcagttctaagcctgtactgcagtac
tcctcagcatttgacgatgaggtggaagagctgacagaagagacgcctgcagaggtgcca
aactttccagaacccactctggagaatgagcaggaagaccctgctgagagtgggatgggt
gctgcctgtgagcctcagcttgatgtggtgatcccagccaatcaggaagagtctgttcgc
ccctcaaccggtgtggtgcatggaccttactactacttctaccaagctgatgactgccag
cagatgtttctgcatcctctgaatgttcgctgtcttatacgtgaatatggcagcttggag
gcctgtcctgactccatcactgccactgtggtggagatagttggacacacagtcactgag
gatattcgtcgtcggcatcgctatctggctcatctgccgctcacatgtgaattcagcatt
tgtgagttagttcttgagccaccagtcgtttccaaagagactctggatacatttgcagat
gacttggagaaaagaaggcgcatgaggcagaagaaagtaagggacgagaaacgcagggag
aaaagaattgaaattgaggagaacaagaagcagggtaaatatccagaggtgcacattgga
ctggagaacctccatcatttcccagcatttggctctcctcctcacaactttagtcctccc
tttcagcctgatctaagttttgcccctccatcccccctcagcagcagccccccctctgat
gggatgagactcctgactccaagcttgccctcacagactgtgggcagcctggaggatgat
tctcactgcatgtcttttgcacagatgttaagagatgggaaagccagagttgatgctgga
cccagaattaccccaaagaaagataagctgctcgcccccccagcagtggacagtgatggt
gagagtgacggatcagagcgcgttccagttcccagctttcagaattccttctgccaggct
tttgagaaggctcttctggagttggacaacggaacagcttcaccacctcaagccgtggtc
gaactcgatgaaaaaggtggaaagaagaaaaagaaaaagcagaaactgctgttcagcact
tccatggttcacacaaaatag
DBGET
integrated database retrieval system