Oryzias melastigma (Indian medaka): 112148438
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Entry
112148438 CDS
T07439
Name
(RefSeq) nuclear factor 7, ovary-like
KO
K12012
tripartite motif-containing protein 35
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112148438
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112148438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
DUF4200
U-box
HEPN_RES_NTD1
UPF0047
DUF4934
Gp58
zf-rbx1
End3
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
112148438
NCBI-ProteinID:
XP_024131329
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Position
LG9:4793216..4794886
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AA seq
471 aa
AA seq
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MAERAALLESFLNCHICSETFNDPVTLSCNHNFCSSCLQKFWEQTQNKNCPICKRKTSKD
PAVNFSLKELADSFAGRLKSESSETKTGEQKIMEVCSKHPEESKLFCKDEQRDFCPVCQL
SLHQSHKVVHVEEAVRELKEELKSDLKSLQDKKMKYKEVEETYNQMIQHSKKQLLSTETQ
IRAEFNKLHQFLKEEEESRLAALREEEEQKGKTVSREMKRIQEQMSSLSESISAVEAELQ
KDKEAFLSSSKDTQSRARAQSSLSDPQLLSGALIDVAKHVGNLSFRVWEKMKEKVHFSPV
LLDPNTANRRLYLSDDLTSVRVGETSQQLPDNPERNMEYTDVFGSENLKSGKHRWEVEVG
DLPVWNIGVAKESVNRKGERVASPKDGCWCLLHRNGKYANGFGHTLTATKSLQKIRVQLD
YDRGEVSFYNPEDMTHIYTYKDTFTEKLLPHFTVGKSVDAKTSKLQICPTD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagagctgctcttttggaatctttcctgaactgtcacatttgttcagagact
ttcaatgatcctgtaactctgagctgcaaccacaacttctgttcaagctgtctgcagaag
ttctgggaacaaactcagaacaaaaactgtcccatctgtaaaagaaaaacatctaaagat
cctgctgtgaacttcagcctgaaggaacttgctgactcgtttgctggaagactgaaatct
gaatcatcagagacaaaaacaggagaacagaagatcatggaggtctgcagcaaacatcca
gaagaatccaaactgttctgtaaagatgagcagagagatttttgtcctgtctgtcagctt
tctctgcaccagagtcacaaagtggttcatgtagaagaagcagtcagagagctgaaggag
gagctgaaatctgacttaaagtctctgcaggacaagaagatgaaatacaaagaagtggag
gaaacatacaatcagatgattcaacactccaagaagcagctgctgtccacagagacacag
atcagagcagagttcaacaagctccaccagttcctgaaggaggaagaggagtccagactg
gcagctctgagagaggaagaggagcagaaggggaagactgtgagcagagagatgaagagg
atccaggagcagatgtcctctctgtcagaaagtatcagtgctgttgaagcagagctgcag
aaagacaaggaggcgttcctcagcagttctaaagacactcagagcagagccagagcccag
agctcactgtcagacccacagctgctctcaggagctctgatagatgtggccaaacatgtg
ggcaacctgtccttcagagtctgggagaagatgaaggagaaggtccacttcagtcccgtc
ctcctcgacccaaacactgcaaacagacggctttatctgtctgatgatctgaccagtgtg
agagtaggagaaacttctcagcagcttcctgacaatccagagagaaacatggaatatact
gatgtttttggctctgagaacttaaaatcagggaaacacaggtgggaggtggaggtggga
gatctgcccgtctggaatattggtgtggctaaagagtctgttaacaggaagggagagagg
gttgcttcaccaaaagatggatgctggtgtttattacatcgtaatggaaaatacgcaaac
ggttttggtcacactcttactgcgaccaagagtctccagaagatcagagtccagctggac
tatgacaggggggaggtgtccttctacaaccctgaagacatgactcacatctacacttac
aaagacactttcactgagaaacttttaccacatttcactgttggaaaatctgtagatgca
aaaacctctaaactccaaatctgtccgactgattga
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