Oryzias melastigma (Indian medaka): 112150744
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Entry
112150744 CDS
T07439
Symbol
podn
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112150744 (podn)
Proteoglycans [BR:
oml00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
112150744 (podn)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_6
LRRNT
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
112150744
NCBI-ProteinID:
XP_024134982
Ensembl:
ENSOMEG00000001636
LinkDB
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Position
LG4:23772227..23784051
Genome browser
AA seq
745 aa
AA seq
DB search
MDLLKCCVLHALTLQLLVGLLARCQTSVTPEGEDELLGETSIPTAPPQLDLLECPSECSC
AADGSVDCAGVDLTEFPPELSDRTRRLSLQNNKIQKVTVEHVSHLHQLETLNLQNNWLTT
DGLEDEGFEMLEQLAYLYLANNKLTSAPKVLPPSLVSADFAANQLTKIYPYTFGHKPSLR
SVYLHNNKLTDAGLPYDMFNASDKLEVLTMSSNFLHVVPTNLPSSLHRLHLKNNKLEKIP
PGVFDNMPHLRELYLQNNLLSNEGMDNETFSRLGSLECLDLSNNNLTVVPKGLPRNLVLL
HLDKNSIHSIPGDALASVRNLEYLLLHHNKLRSRSIHPAAFQGLKKLHTLHMYNNLLERI
PRGLPRRAKTLMLLHNSISEIGRNDLALLFTLTELNLSYNKLTTPKIHREAFRKLRILET
LDLSGNRLHTVPLGLPRSLRVLKIKNNELSSIPHGAMAGMEKLQKLILSENQLKLNSVYQ
GAWMELSALTTLDLSDNQLTHIPADLPESLEYLYLQKNRISSIPASAFEGTPNIRGIFLR
FNRLSAASFDEASFAHLTQLQVLDVGQGNPDLFSQRKETEGGALTQEEEEEEEKPRQRLS
KKQKRKKKQQKVVEHNPLEEEEEEVKEEEKPAAPTSCKEDAAEKQADTAEPETPDNLPPT
EVKGSGKTKGKKGGGKDRMRTAKPQNADQVPEKELNLRCVTCNNEFSTRNKLFDHLKTSG
HATALSANGQQTSTSKSKKDKKKNR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaccttctcaagtgctgtgtgctgcacgccctgactctgcagctcctggtggggttg
ttggcacgttgtcagacttctgtcacaccagagggagaggatgagctgttaggagagaca
agcatcccgacggctcccccgcaactggacctgctcgaatgcccgtccgagtgcagctgt
gctgcagacgggtcggtggactgtgctggggttgatctcacagaattcccgccggagctg
tcggacagaacgcggcgcctctctctgcagaataacaagatccaaaaagtgacagtggag
cacgtgtcccacctgcaccagctcgagaccctcaacctccaaaacaactggctcaccaca
gatggccttgaagatgaaggttttgagatgcttgaacagctggcttatctttacctagca
aacaacaagctcacgtcagctccaaaggtcctgccgccctcgttggttagtgctgacttt
gcagctaaccagctcacaaagatttacccgtacacttttggtcacaaaccgagtctacgg
tctgtgtatctccataacaacaagctgacggatgcaggactcccatatgacatgttcaac
gcttctgacaagctggaggtcctcaccatgtccagcaactttctccatgtggtccccacc
aacctgccctccagcctgcaccgccttcatctaaagaataacaagttggagaaaattccc
ccaggagtttttgacaacatgccgcacctccgagagctttatctgcagaataacctgctc
agcaatgagggcatggacaacgaaacgttcagtcggctcggaagcctcgagtgtctggat
ctgtcgaataacaacttgactgttgttccaaagggtttgccacgcaacctggtgctgctg
catctggacaagaactccattcacagcatccctggagatgctctggcgtcggtccggaac
ctggagtatctgctcctgcaccacaacaagctgcgctcgcgctccattcaccccgctgcc
tttcagggtttgaagaagctccacactctccacatgtacaacaacctgctggagcgcatt
cccagaggcctgcctcgacgagctaaaacgctgatgctcctccacaactctatatccgag
atcggccggaacgacctggcgcttctcttcaccctgacggagcttaacctcagctacaac
aagctgacgacccccaagatccaccgtgaggccttcaggaagctgcgcatactggaaact
ttggacctgtcaggaaacaggttacacacggtgccgctgggtcttcctcgcagtctgcgc
gtcctcaagatcaagaacaacgagctcagctccatccctcatggagcgatggccggcatg
gagaagctgcagaagctgatcctgagtgagaaccagctgaagctgaactctgtttaccag
ggagcctggatggagctgagcgcactcacgacattggacctctctgataaccagctgacc
cacatccctgctgacctgcctgagtctctggagtatctttacctgcagaagaaccgcatc
tccagcattcctgcttcagccttcgaaggaacaccaaatatcagaggcatcttcttacgc
ttcaatcgactgtctgcagcctcctttgatgaagcctcttttgcccacctgacgcaactg
caggttttggatgtaggtcaaggaaaccctgacctcttttctcaaaggaaggaaacagaa
ggtggagcactgacacaggaggaagaggaggaggaagaaaagccaagacaaaggctttcc
aaaaagcaaaagagaaaaaagaagcagcagaaagtcgtggagcataaccccctagaggag
gaggaggaggaggtgaaggaagaggagaaaccagcagcacccacctcctgcaaggaagat
gctgctgagaaacaggctgacactgcagagccggagacaccggataacctccctcccact
gaggtcaagggctctggtaaaacgaagggaaaaaagggcggagggaaagacagaatgagg
actgcgaagccccaaaatgctgatcaagttcctgagaaagaattaaacctccgctgtgtc
acctgcaacaatgagttttccactagaaacaagctgttcgatcacctgaagacgagcggc
catgccaccgcgctgtccgccaacggccaacagacctccaccagcaagagcaagaaagac
aagaagaagaacagataa
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