Oryzias melastigma (Indian medaka): 112152592
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Entry
112152592 CDS
T07439
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112152592 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112152592 (si:dkeyp-19e1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112152592
NCBI-ProteinID:
XP_024138025
Ensembl:
ENSOMEG00000019015
LinkDB
All DBs
Position
LG6:complement(29416138..29437426)
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AA seq
736 aa
AA seq
DB search
MKKDIDSLIAEERAEIISKYDKGRQEGVDIDPWEDADYTIYKVTDRFGFLHEEELPTPTP
LEEKQKQQELERVQKWLKMVKKWDKYKNSEKLVKRVYKGIPLQLRGQAWALLLDVEKMKE
ENEGTYERMKLQARSFSTEIKQIDLDVNRTFRNHIMFMDRFGLKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAMLLMYLNEEDAFWALSQLLTNSKHAMHGFFIPGFPKLHRFQAHHELI
LSKLLPRLKKHLDKEQMTTGLYTTKWFLQCFIDRSPFTLTLRLWDIYMLEGEKMLTAMAY
TTLKLHRKRLQNLQLEDLREFLQEQLAASFLFQDDVVVEHLQAAMSELRSKKMNLPPPAK
SDELPKRPLGEERRLLLQPLQPEPPTQVQMRLQGSEGAGADSSGRSQAVPDPRCSSKTPP
SPSLPQPPPPPADKASPGVGGLRDAGEVCQDERQQEEQTRPPQTQEEPAEWPPPYQPSAS
DVVDMPAEEDFMDLPDLPPPPCSFCDQVPTPPRPPPQNTKPPRPLAVSSPPSLRPSTPSK
FPVSLFVPSPPGNRRPSNTSQYDNLSDDEQLADRLLASTPEERPSMHCTPPYSVDRDYDP
THYPLPPPPLLLSRSFSPLPPGTCPLPSLPQEPEDRGYSWVQDATPPPPPPSFADRLSPF
QEGAAPFPDQAAPPTSCKPFCRGPRDRSTFPAPLMYTGSPRGHSRSPGQRSPLLQSSSDF
CRGPPGGQQLPKSVTF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacatagactcactgatagcagaggaacgtgctgagatcatttccaaatat
gacaagggcagacaggagggcgttgacatcgacccatgggaagatgcagactacaccatc
tacaaagtcaccgaccgcttcggcttcttgcatgaggaggagctgcccacgccaacgccg
ctcgaagaaaagcaaaagcagcaggagctggagcgcgtgcagaaatggctgaagatggtg
aagaaatgggacaagtacaagaacagcgagaagctggtgaagcgggtgtacaaaggcatc
cccctgcagctgagaggtcaggcctgggctctgctgctggatgtggagaagatgaaggag
gagaacgaaggaacgtatgagaggatgaagctgcaggctcggagtttctccacggagatc
aagcagatcgacctggacgtcaacagaaccttcaggaaccacatcatgttcatggaccgc
ttcggactcaagcagcaggccctgttccacgtgctggcggcgtactccgtctacaacacg
gaagtcagctactgccaggggatgagtcagatcgccgccatgctgctgatgtacctgaat
gaagaagacgccttctgggctctatcccagctcctcaccaacagcaagcacgccatgcat
gggttcttcatcccgggatttcccaaactgcaccgcttccaggctcaccatgagctcatc
ctctccaaactgctgcccaggctgaagaaacacctggataaggagcagatgaccacgggg
ctttacaccaccaagtggttcctgcagtgcttcatagacagaagcccgttcacgctcacg
ctgcgtttatgggacatctacatgttagagggagagaagatgctgaccgccatggcgtac
accaccctgaagctgcacagaaagcgtctgcagaacctgcagctggaggacctgagggag
ttcctgcaggagcagctggcggcttccttcctgttccaggatgatgtggtggttgaacac
ttacaggcggccatgtctgagctgcgaagtaagaagatgaacctccctcctccagccaag
tctgacgagctccccaagaggcctttgggcgaagagcggcggcttctcctgcagccgctg
cagccagaaccccccacacaggtccaaatgaggctgcagggcagcgagggggccggcgca
gacagcagtggccggagtcaggcggtcccggatccgagatgctcctcaaaaactcctccc
tccccgagcctgccccaaccacctccaccgcctgccgacaaggcctctccgggagtgggg
gggctcagagatgcaggggaggtttgtcaggatgagagacagcaggaggagcagacgaga
cccccccagacccaggaggagcctgcggagtggcccccgccctaccagcccagtgcttcg
gatgtggtggacatgccggcggaggaggacttcatggatctgccagacctacccccccca
ccctgttctttctgtgatcaggttccaaccccccctcggccccctccccagaatacaaag
cccccccgtccattggcagtgtcctcccctccaagcctccggccctcgactccgtcgaag
ttccccgtctccctgttcgtcccgtccccccccggaaacagacgcccctccaacacctcc
cagtacgacaacctgtccgacgacgagcagctggcagacagactcctggcctcgactccc
gaggaacgtcccagcatgcactgcactccaccctattctgtggacagggactatgacccc
acccactacccgctgcccccgccccctctcctcctgtcccgttcgttctctcctcttcct
cccgggacctgccccctccccagtttgcctcaggagccggaggaccgaggatacagctgg
gtgcaggacgccactcccccccctcctccgcctagttttgccgacagactaagcccattt
caggagggcgcagcccccttcccagaccaagcggcgccccctacctcctgcaagccattc
tgcaggggcccccgagaccgctcaacattccccgcccctctgatgtacacgggctccccc
aggggtcactccaggtcgcccggacagcgctcgccgctccttcagtccagctcagacttc
tgcagggggcctccgggggggcagcagctgcccaagtcagtgactttttga
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