Oryzias melastigma (Indian medaka): 112154293
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Entry
112154293 CDS
T07439
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112154293 (med1)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
112154293 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
TniB
ATPgrasp_YheCD
AAA_22
Ras
Motif
Other DBs
NCBI-GeneID:
112154293
NCBI-ProteinID:
XP_024140908
Ensembl:
ENSOMEG00000014943
LinkDB
All DBs
Position
LG19:complement(10509167..10519615)
Genome browser
AA seq
2539 aa
AA seq
DB search
MKLTKIKINVSLFRKPARMSGLERTGTMATGPVVSVQSGSPAGELPISVQQGGNPPIIDR
VKAEDVTESEKQSRTVALLERLHAKHNASRPWQETCKVVRLAMEKRGVMNAAGHQLLLNC
LETLQRALKVSSLSSMTDRLESIARQNMLGSHLSPTGTECYITSDMFYVEVQLDSNGQLV
DVKVAHQGENPTSCPELIQHLREKKFEEFSKHLKGLVDLYKLPGDNKLKTKMYIALQSLE
LDLAKMMHMFRLATSANTVETILHGSVGLLTPRSGGNLVTLQCYVSPYDIFQEGTQLNLT
DNNVPRSLGVSVSVTIEGTSAVYKLPIAPLITGSHPVDNKGTPAFSTVTNSNCVDLPACF
FLKMNRPMPFSAAFIKRMSNATLIPVFETPPSLSPLYQLIVQSQLQLLEEGSSLPAPSHN
MHFYSILPDQQHCYFLNGNAPIQDGHSLQGAMVSKIPFRHPAHVPLLLDIIRHQAAYNTL
IGSCVRQKSIKEDSAGLLQFEVCPLTDSSFGVSFQHPVNESLVCVVMEVIDSRQVSCKLY
KGQSDALICTDDFITKVVQRCMSIPVTMRAIRRKAETIQADTPALLLIAETVATMVKNNL
QPSGSPTYNMAAGDGSNPGLHGLTGSNTPTAGGLPGGPNFPLFGMPRQERQPQGGECTTP
GAAGPQQLQQQQQGQGHTDDYNKVTQNPILTSLLQITGNVGSSPSSQNAPPPHQTPPPTS
SPASNTKNHPMLMNLLKDNPTQDFAALYGSGSMERQNSSSGSPRTDGMGGACPGGNPKGK
KKRPRGTEKAGGIPGAGTCGGSGGLGMKPQQSTMAQQQHHSVSHEDDFHRELFSMDVDAS
QNSIFDVNLTGDGLDTPHSITPAPSQCGTPPPGSNMPYSQSHIPPQQPPGAVPPRMVRLS
SSDSIGPDITEILQDLPEQTGKGSGESHGQHPMGGGGDDVGPLGTPIRDSSSSGQGSAVF
DSGDIFNTNSNENPFTDTDLIPTPPDPIQDSDCSSSPFFPDPPDFTPEHSFPQNFFETCS
ESPDGVMEMVKGFGSQQNTPSGTPQNPTPHGQNTPEPSLKDPFDMGIVFGGNSGSGKPLL
GHAPDLGDTHGGGSQSPLMMGLGGSCSDFKSTEPKVKQQQGLVRAKDDNGGSGGSNSGMG
MGTSSTEGKQVKRSRTPSSEGKSKEKPPKRKKVDPDGKSPSHSSGGRPYTPPSGGLSSGV
SLSAGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTITGGKTSSHSGYTSSSSASSSS
GGAGSTSSSKSHHSHSSSSGKIKSKESSLSQGNNSKPGGAGGGSGQSQSKGSSQGVSKPG
SSPITKHGFSGPGGAGSGNKIKPQGGKPPGSLINPNVKPNISPSHSRSGGSGDKLSSPMK
MQQPQVPGTPPSSKAKSPMGSGGSSSGGSKSSSGGSQSSQKPIGGGSSSTGSSSSSSSSS
SSGSMSFSGGSQSQYVGGGGGSGGGSGGSGGGSGQNNSNNPNAKGKSPSRNKKPSLTAVI
DKLKSVGGGGVGEDGCDVGPPASGAGSTSAPGGSGNVSSGSSNVGSSKHTSSSQSGEYKR
EKSDKEAKAKVSVSGGNSGEKKTMDSKSGSGGGNTLAKIIISKPDGGSPSIKAKVTLQKA
GEGSGDSMRPQISSLKASPLFSGSTPKHDRSSPSHSRSPAYTPLNPDSESESGSSSVAEK
SHQNSPSSDDDQTMRPLPPQDYMSSISMGSGEKHKKHKKEKKKQKEKERKERLKKEGKLL
TKSQKEAKLRAEAMLSMLQAQGVEVPSKDTVPKKKPVYGDKRRKKPNTQISPEETSAVTS
PTSETPEPIAMETEAETPAPQPEAKPEPVVDNWEKFASDEEKDLKKVHIEVKEETTAPPQ
PAASEEEEDDEEEDEEDNEEEESEDDVEVEKEAAPASQGKKKAVSEDESSESEEDDGRTK
EERLYDRAKRRIEKRRAENLKNTDPERLRAPVVCVLGHVDTGKTKILDKLRHTHVQDGEA
GGITQQIGATNVPKETIEEQTKMVKNFDRESIRIPGMLIIDTPGHESFSNLRNRGSSLCD
IAILVVDIMHGLEPQTLESINLLKEKKCPFIVALNKIDRLYDWKKSPETDVVATLKKQKK
NTKDEFDERTKAIIVEFAQQGLNAALFYENKDHRTFVSLVPTSAHSGDGMGNLIALLVEL
TQTMLARRLAHCDELRAQVMEVKALPGMGTTIDVILINGCLREGETIIVPGVDGPIVTQI
RGLLLPPPLKELRVKSQYEKHKEVSTSQGVKILGKDLEKTLAGLPLLVAHKEDEVPVLRD
ELVRELKQTLSSIKLEEKGVYVQASTLGSLEALLEFLRTSKVPYAGINIGPVHKKDVMKA
SAMLEHDPQYAVILAFDVKVERESQEMADSLGVRIFAAEIIYHLFDAFTKYREEYKKAKQ
DEFKNIAVFPAKLRVLPQFIFNSRDPIVMGVSVEAGVLKQGTPLCVPSKGFVEIGIVTSI
EVNHKSVDTAKKGQEICVKIEPIPGESPKMYGRHFEATDIIVSKITRASIDALKNWFRDE
MQKSDWQLIMELKKTFEII
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaactaaaataaaaataaatgtaagtttgttccggaaacctgcgcggatgagc
ggactggagcggacagggacaatggcgaccgggcctgttgtgtctgtgcagagcggcagc
cctgctggagaactccctatttcggtacaacagggaggaaatccacctattatagatcgg
gtaaaagcagaagatgtaacagagtcagaaaagcagagtcgaacagttgctctgttagag
aggcttcatgctaaacacaacgcttcccgaccatggcaagaaacctgcaaagttgtccgt
ctggccatggagaaacgcggtgtgatgaatgcggcgggtcaccagctcctactcaactgc
ttggagactctgcagagagcactaaaagtgtcatctctgtcttccatgaccgatcggctg
gaatccattgcacgacaaaacatgttgggctctcacctcagtcctacagggacagagtgc
tacatcacctcagacatgttttatgtggaggtgcagctggactcaaacggtcagctggtg
gacgtcaaggtggctcatcaaggagagaaccccacaagttgtcctgagttaattcaacat
ttaagggaaaagaaatttgaagagttttccaaacatctcaaaggacttgttgatttgtac
aaacttccaggagataataaactgaagacaaaaatgtacatagcactgcaatcgttggag
cttgatctggccaaaatgatgcacatgtttaggttagcaaccagcgctaatacagtggag
acgattcttcacgggagcgtgggcttgttgacgcccaggagcggcggcaatctggtcact
cttcagtgctacgtttcgccttacgacatcttccaggagggaacgcagctcaacttaact
gacaacaatgtgccgcgctctcttggagtcagtgtgtctgttacgatcgagggaacctcc
gctgtgtataagcttccaatcgcaccgctcatcaccggctcacacccagttgacaacaag
ggcactcctgccttttccactgtgaccaactccaactgtgtggacctgccagcttgtttc
ttcctgaagatgaaccgcccaatgcctttctcagctgccttcattaagaggatgagtaat
gcgactttgattcccgtgtttgagactcctcccagcctgtcacctctttaccagttaata
gtccagagtcagctgcagctcctggaagagggcagctctttgccagcaccctcacacaac
atgcacttttattctattttgccagatcagcagcactgttactttctgaacggtaatgct
ccaattcaagacggacactcccttcaaggagcaatggtgtccaaaattccctttcgccac
ccggcacacgtgccacttctgctggacatcattcgccaccaggcggcttacaacactctg
atcggcagctgtgtccgacaaaaatccatcaaagaagacagtgcaggccttctgcagttt
gaagtttgtcctctcaccgactccagttttggcgtctctttccagcatccggtcaatgaa
tcattagtttgtgtggtgatggaggtgattgactccagacaagtgtcctgcaagctgtat
aaagggcaatcagatgctttgatctgcactgatgatttcatcaccaaagtggtccagaga
tgcatgtctattcctgttaccatgcgggccattcggaggaaagctgagaccatccaggca
gacactccagctcttctgcttattgcagagacggtggcgactatggtgaagaataacctt
caaccttctggcagtcccacctacaacatggcagcaggagacgggtcaaacccagggctg
cacggactcacgggaagcaacacgccgactgctggtggattgcccggcggcccaaatttc
cccttgtttggcatgcctcgccaggagaggcaaccccaaggtggtgaatgtacgaccccg
ggagctgctggcccacagcagctacagcaacagcagcaaggtcaaggtcacacagatgac
tacaacaaggtcacccaaaaccccatactgacaagtttattgcagattactgggaatgtt
ggttccagtcccagctcccaaaatgcacctccaccccaccaaactccacccccaacatcc
tcccctgccagcaacactaaaaaccatcctatgttgatgaacttgttaaaagacaacccc
acgcaggatttcgctgccctgtacggctcgggttcaatggagagacagaactcttcatct
ggttctcctcgaacggacggcatgggtggagcctgccctggagggaacccaaaggggaaa
aagaaaagacccagagggacggaaaaggctggagggatacctggagcggggacttgtgga
ggaagtggtggtttggggatgaaaccgcagcagtcgaccatggcacaacagcagcaccat
tcagtgtcacacgaagacgactttcaccgggagctcttctctatggacgtggatgcttct
cagaattctatttttgacgtcaacttgacaggtgacggtctggacacgcctcatagcatc
actccagcaccaagccagtgtgggacgccacctcctggctctaatatgccttattcacag
tctcacatcccgcctcagcaaccaccaggagccgtccccccccgcatggtccgactctcc
agctctgatagtattggacccgatatcactgaaatcttgcaggatttacccgaacaaaca
ggcaaaggcagcggcgagagccatgggcagcaccccatggggggcggcggggatgatgta
ggccccttgggcacccccatccgggactcatccagctccggtcaaggtagcgcagtgttc
gattcgggagacatttttaacaccaacagcaatgaaaacccctttacagatacggatctg
attccaactcctcctgatcccattcaggatagcgattgttcctcctctccgttctttcct
gatccacccgacttcaccccagagcacagcttccctcagaacttctttgaaacctgctct
gaaagtcctgatggagtcatggaaatggtcaagggatttgggagtcagcagaatactcca
tctggaactccgcagaatcctactccacacggacagaacacaccagaaccctcgctgaag
gacccatttgatatggggatagtgtttggaggcaacagtgggagtgggaaaccgcttctg
ggacacgctcctgatcttggagacactcatggaggaggatcccagagtcctctcatgatg
gggcttggaggttcctgttcggattttaaaagtactgaacccaaagtcaaacaacaacag
ggtctcgttcgagcaaaggatgataacgggggcagtggaggaagcaattctggaatggga
atggggaccagctcaaccgaagggaaacaggttaaacgaagtagaaccccatccagtgaa
gggaagtcaaaagaaaagcctcccaaacgcaaaaaggtggatccagatgggaaatctccc
tctcacagttcaggtgggcgaccttatacgccccctagtggcggtttaagttcaggggtt
agcttgagcgcaggaggctccaagtctcctggtagttcaggacgctcccagactccccct
ggagtggccacacccccaattcccaaaatcaccattcagatcccaaaggggactataact
ggcgggaaaacctcgtcccatagcggatacacctccagcagctcagcctccagcagctca
ggcggtgcaggaagtacgagcagcagcaaaagccaccactctcactcgtcttcctccgga
aagatcaagtccaaagaaagctccttatcacagggaaacaactccaaaccaggaggagca
ggaggtggaagcggacagtcccagtctaaaggctcctctcaaggtgttagcaaaccagga
tcgtcaccgataacaaaacatggattttcagggcccggtggtgccggaagtggtaataaa
ataaagccacaaggaggaaaacctcccgggtctctgattaaccccaacgtgaagccgaac
atttccccctcccattcccgctccggtggctctggggacaaactctcgtctcccatgaag
atgcagcaaccacaagttccaggaactcctccgtcctcgaaggctaaatccccaatgggg
tctggaggaagcagctcgggagggtccaagtcttcctctggtggaagccaaagctcacag
aaaccaatcggtggcggctcctcttcaaccggatcttcatcatcctccagttcttcctca
tcctctggttccatgagcttctcgggaggttcccagtctcagtatgttggtggagggggt
ggaagtggaggaggaagtggaggaagtggcggggggagcggtcagaacaactccaacaac
cccaacgcaaaagggaagtctcccagtcggaacaaaaagccgtcactaacggcggtcatc
gataagctgaagagcgtgggtggaggaggagtcggagaagacggctgcgatgtagggcct
cccgcttcaggagctggttcaacatctgctcctggaggttctggaaatgtttccagtgga
tcttctaatgtaggctcctccaagcatacctcgtcctcccaaagcggcgagtacaaacgg
gaaaaatcggataaagaggcaaaagctaaagtgtctgtttctggggggaacagtggcgag
aagaagacaatggactcaaagtcaggtagtggaggcgggaataccctcgccaaaattatc
attagcaaaccagatggtggctcacctagcattaaggctaaagtgaccctccagaaggcg
ggggagggatccggtgactctatgcgtccacagatttctagtctcaaagcgtccccgctt
tttagtggctctacgcccaaacacgaccgctcgtcgcccagccatagccggtcccccgca
tacaccccgctcaaccccgacagcgagagcgaatccggtagcagctcagtcgccgagaag
tcccaccagaacagccccagctcagacgatgaccagaccatgcgtcctctccctccacaa
gactacatgagctccatctcaatgggttcaggggagaagcacaagaaacacaagaaggag
aagaagaagcagaaggagaaggagaggaaggagcggctgaagaaggagggcaagctgctg
accaagtcccagaaggaggccaagctgcgggcggaggccatgctgtccatgctgcaggct
cagggtgtggaagtgccatccaaagacacggtgccgaagaagaaacccgtctacggagac
aagaggaggaagaagcccaacacccagatttctcctgaagagacatccgccgtgacgtca
ccaacatcggagaccccagagcccatcgctatggaaacggaggccgagacgccggctcca
cagccagaggcgaagcctgaacccgtcgtagacaactgggagaaattcgccagcgacgaa
gaaaaagacttaaagaaggtccacatagaggtgaaggaggagacgactgcacctcctcag
cctgctgccagcgaggaggaggaggacgacgaagaggaggatgaggaggacaacgaggag
gaggagagcgaagacgacgtggaggtggagaaagaggcggcgccggccagtcaggggaag
aagaaggcggtcagcgaggacgagagcagcgagagcgaggaggacgacggcaggacgaag
gaggagcgcctctacgaccgagccaaaaggaggatcgagaaacgaagagccgagaacttg
aagaacaccgacccggagcgtctgagagcgccggtggtttgcgtgctcggacacgtggac
acgggaaagaccaagatcctcgacaagcttcgacacacccacgttcaggacggtgaagcc
ggaggaatcactcagcagatcggagccacaaacgtgccaaaggaaacaatagaggaacaa
acaaagatggttaaaaattttgacagagaaagcatcaggattcccggcatgctaatcata
gacacacctggacacgaatccttcagtaacctgaggaacagagggagctctctttgtgac
atcgccatcctggtggtggacatcatgcacggcctggagcctcagacgctggagtccatc
aacctgctgaaggagaagaagtgtcccttcatcgtcgctctcaacaagatcgaccggttg
tacgactggaagaagagtccggaaacagacgtggtggccacgctgaagaagcagaagaag
aacaccaaggacgagtttgacgagagaaccaaggccatcatcgtggagtttgctcagcag
ggtctcaacgccgccttgttctacgagaacaaggaccaccggacgttcgtgtcgctggtt
cccacctcggcccacagcggcgacgggatgggaaacctcatcgcgctgctggtggagctc
acgcagaccatgctagcacgccggctagcgcactgcgacgagctgcgtgctcaagtcatg
gaggtgaaagctctgcccggcatggggaccaccatcgacgtcatcctgatcaacggctgt
ctgcgggagggagagaccatcatcgttccgggggtggacgggcccatcgtcacacagatc
cgaggcttactgctgcctccccctctgaaggagctcagagtgaagagccagtacgagaag
cacaaggaggtgtccacgtctcagggagtgaagattctgggtaaagacctggagaagacg
ctggcggggctccccctgctggtggcgcacaaagaagacgaagtccccgtcctcagagat
gaactcgtgcgggagctcaaacagaccctgagctccatcaagctggaggagaagggcgtt
tacgtccaggcgtccacgctggggtcactggaggctctgctggagttcctacggacgtcc
aaagttccttatgctggcatcaacatcggccccgtccataaaaaggatgtgatgaaggcg
tccgccatgttggagcacgacccgcagtacgccgtgattctggcgtttgacgtgaaggtg
gagagggagagccaggagatggcagacagcctgggagtgcgcatcttcgcagccgaaatc
atctaccacctgttcgacgctttcactaaatacagagaagagtacaagaaggccaagcag
gacgagttcaagaacatcgccgtgtttccagccaagctgcgagttcttccccagtttatc
ttcaactccagagatcccatcgtgatgggcgtgtctgtggaggccggagtcctcaagcag
gggacgcctctctgtgttcccagcaaagggttcgtggaaatcggcatcgtcaccagcatc
gaggtgaaccacaaatccgtggacacggccaagaaaggccaggagatctgtgtcaagatc
gagcccatacccggagagtcgcccaagatgtacggacgccactttgaggccacagacatc
atcgtcagcaagatcactcgggcgtccatcgatgctctgaagaactggttcagagacgaa
atgcagaagtcggactggcagctcatcatggagctgaaaaagacctttgagattatctga
DBGET
integrated database retrieval system
