Oryzias melastigma (Indian medaka): 112155421
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Entry
112155421 CDS
T07439
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112155421 (cwc22)
Spliceosome [BR:
oml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112155421 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
112155421 (cwc22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
Motif
Other DBs
NCBI-GeneID:
112155421
NCBI-ProteinID:
XP_024142794
Ensembl:
ENSOMEG00000015199
LinkDB
All DBs
Position
LG21:6540199..6554915
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AA seq
934 aa
AA seq
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MDSSDRSQSPSPQNEQPSGDESNPSDGRLQQVSAEEESTKEQQSPQTKPMSRNSSKSPSP
SSSDSSSSSDEDEHHGALRKIRSSVAEIKRPEQTRSRSSEKDDSRSRSRSKSGEKDRSRS
RERDRSQSRGRDRSRSRSRGRDGSRSRRRDRSRSRSRDWNPDRFNRRYYPRDRYDDRRDD
RNGRFDRRGNRDMEPGERRRGRSASPPIDKEAETPDQPPVKKKKEEIDPILTRTGGAYIP
PAKLRMMQQQITDKSSLAYQRMSWEALKKSINGLINKVNVSNIVNIIQELLQENIVRGRG
LLARSVLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLILTFRRSYRRNLKQQCLN
ASKFVAHLINQNVAHEVLSLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAI
FERLRNVLHESSIDKRVQYMIEVMFAIRKDGFKDHPVIPDGLDLVDEEDQFTHMLPLEDD
YNQEDALNVFKMDPDFLENEEKYKTIKRDILDEGSSDSGDEGDGSEEEVNDEEEEEEGEK
VTIFDKTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQR
TYEKFFGLLAGRFCLLKKEYMESFEAIFAEQYETIHRLETNKLRNVARLFAHLLYTDSVP
WSVLECIKMSEETTTSSSRIFVKILFQELCAYMGLPKLNQRLKDSTLQPFFEGLFPRDNP
RNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSDSSSSDSS
SESDSDSSSDSSSSSSSSDSDSKRKKRKGRREEKKKTEKNKRKEKPDKKQHRSKRDKDDD
DDEKAARKDQRRHERDVHERAHEDPRRRRRDEGSEEEEEDRRRKTDRARDGERHRERERE
RDRGREREIEGKRERERERNKENRDRNREERRRR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcagacagaagccaaagtccatctcctcaaaatgaacaacctagtggtgat
gagtccaatccgtctgatgggagactccaacaagtcagcgcagaagaggaaagcaccaaa
gagcagcagtctccacagacaaagcccatgtccagaaactcatccaagagcccctcccct
agcagctcagacagcagcagcagcagcgatgaagatgagcatcatggagcacttaggaag
ataaggagtagtgttgctgaaatcaaaagaccagagcaaacgagatccaggtccagtgaa
aaagacgactccagatccagatccagatcaaagtctggtgaaaaagaccggtcccggtcc
agggagagagacagatctcagtccaggggtcgtgatagatccagatccagatcaagggga
cgagatggatccaggtcgagaagacgggacagatccagatccagatctagggactggaac
ccagaccgttttaacagaagatactatcctcgcgatcgctatgatgatcgacgtgacgac
agaaacggccgtttcgatcggcgaggcaaccgggatatggagcctggtgaaaggaggcgg
ggccgctctgcttctcctcccatcgacaaggaggcagagactccagatcagcctcccgtt
aagaagaaaaaagaggagattgatccgatcttaaccaggactggtggtgcttacattccc
cctgccaagctgcgcatgatgcagcaacaaattactgacaagagcagcctggcctatcag
aggatgagctgggaggctctgaaaaagtccatcaacggtttgatcaacaaagtcaacgtg
tccaacatcgtcaacatcatccaggagctcctgcaggaaaatatcgtcagagggaggggt
ttgctggctcgctcagtgctgcaggctcaggcagcttctcccatcttcactcatgtctac
gctgctgtggttgccatcatcaactcaaagttccctcagatcggagagttgatccttaaa
cgcctcatcctgaccttcagacggagctaccgccgcaacctcaagcaacagtgcctgaac
gcctcaaagtttgtggctcatctcatcaaccagaatgttgctcatgaggtattgtctctg
gagatgctgactcttctgctggagcgtccgaccgacgacagcgtggaagtcgccatctcc
ttcctcaaagagtgtggactcaaactgaccgaggtttcacccagaggaatcaatgccata
tttgagcgtctcaggaatgttctccacgagtcgtcgattgacaagagggtccaatacatg
atagaggtgatgtttgccatcaggaaggatggttttaaagatcatccagtgatcccagat
ggtctggacctcgttgatgaggaagaccagtttacccacatgctgccactggaagatgac
tacaaccaagaggatgccctcaatgtcttcaaaatggacccagacttcctggagaacgag
gagaaatacaaaaccattaaaagagacatcctggatgaagggagcagtgattcaggagat
gaaggtgacggcagtgaggaggaggtgaacgatgaggaggaggaagaagagggtgaaaag
gtcaccatatttgataagacagaagtcaacctggttgcatttagaagaaccatctatctg
gccatacagtccagtttggactttgaggagtgcgctcacaaactcataaagatggacttt
cctgagagccaaacgaaggagctgtgtaacatgatcctggactgctgtgctcaacagagg
acctatgagaaattctttggtcttctagctgggaggttttgtctcctgaagaaggagtac
atggagagttttgaggcgatatttgcagaacagtacgagacaattcaccgtctggagacc
aacaagctgaggaatgtggctcggctctttgctcacctgctttacacagactctgtaccg
tggagtgtgttggagtgcatcaagatgagtgaggagacgacgacatcgtccagcaggatt
tttgttaaaattctctttcaggagctttgtgcgtacatgggtctcccgaaactcaaccaa
cggctgaaagactcgactttgcagccgttctttgaaggtctttttcctcgtgataatccc
agaaacactcgctttgccatcaacttcttcacctccatcggtctgggaggactcacggat
gagttgagggaacatttgaagaatgctccaaagatgataatgacccagaaccaggaagtg
gagtcctctgactcctcatcctcctcgtcctcctccgattcctcctcctcagattcttcc
agcgaatcagattcagattcttcgtcagactcctcctcctccagcagcagctcagactca
gacagcaaacgcaagaagagaaaaggtcgcagagaggagaagaaaaagacggaaaagaac
aagaggaaggagaaacctgacaagaagcaacacagaagcaagagggacaaagatgacgac
gacgacgagaaggcggcgaggaaggaccagaggaggcacgagcgggatgtgcatgaacgc
gcccacgaggacccccgacggcgtagacgggacgaaggatcagaggaagaggaggaggac
aggagacgaaaaaccgacagagcgagagatggagaaagacacagagagagagagcgagag
agagacagagggagggagcgagagattgaggggaagagagaaagagagagggagaggaat
aaagaaaacagagacaggaacagggaggagcggaggaggagatga
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