Oryzias melastigma (Indian medaka): 112156397
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Entry
112156397 CDS
T07439
Name
(RefSeq) nephronectin
KO
K06824
nephronectin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112156397
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Gene cluster
GFIT
Motif
Pfam:
MAM
EGF_CA
cEGF
FXa_inhibition
EGF
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
112156397
NCBI-ProteinID:
XP_024144428
Ensembl:
ENSOMEG00000021052
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Position
LG18:1214254..1224721
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AA seq
625 aa
AA seq
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MLVLVLLSLTQTLTRSQRLDDDSWAEPSDGLCRYGNSVECCWGWRQADGGRCQPHCQHAC
KHGDCVVPDRCQCHPGFSGKACNHDLNECGLRPRPCKHRCMNTPGSYKCYCLDGYELQPD
GSCRVRTCYHANCQYGCEVTKGQVRCTCPSPGLRLGPDRRTCVDIDECTSAGSGGLCPRR
RKCVNTFGSFFCKCHLGFRLTYVNGRYTCLDKDPRPFCSLNPSSPKCRCKDGCTVIPKVT
VDPPRPRTTPLLATTATTAAPVTVAPPTAAATTVPTIASTVTTVTTAMETTSLLLTDAST
TTASTTTTVPTTTTTVPTTTTVPTTTVPTTTLPTTTVPTTTIPRTTTTVPTTTTTTTTIV
PTTVPMTTTVPTTTEMDTTTHTTTTSTTTITTTSTTTTASTMPVVTTVSTVALTTTMLPT
TSLKTTTISNKINKEVTQRQRGDVHIPRQPGNNDDWEFDIELGNTAEDARDDPEAGGLHC
TFDRGVCSWMSDRDGDLPWETELSPAGQHYLSVPELKAGQRSIRGARLALQVPPSWSHGD
LCFSFSHWLTGHHVGVLQLFIKKKGRNERYGPALWSRTGGHGWRRTQVTLTTRSVDRVLM
KAERRNGRRGQMAVDDVTLRQGACR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgctggttctggttctgctgtccctgacccaaaccctgacccggagccagcgtctggac
gacgacagctgggcggagccgtccgatggtctgtgtcgctatggcaacagcgtggagtgc
tgctggggctggaggcaggcggacgggggccgatgtcaacctcactgtcagcacgcctgc
aaacacggagactgcgtggttcccgacagatgccagtgccacccgggattcagcggcaag
gcctgtaaccacgacctgaacgagtgcggcctgcgcccgcggccctgcaagcaccgctgc
atgaacacgccgggcagctacaagtgctactgcctggacgggtacgagctgcagccggac
ggcagctgcagggtccggacgtgttaccacgccaactgccagtacggctgtgaggtcacc
aaaggtcaggtgcggtgcacgtgtccgtctccggggttacggctgggtccggaccggcgc
acctgtgtggacatcgacgagtgcacgtctgctggcagtggcggtctgtgtcctcgccgc
aggaagtgcgtgaacacgtttgggagcttcttctgcaaatgccacctgggcttcaggctc
acctacgtaaacggacgctacacctgcctggataaagacccgcggccgttctgctcgctg
aatccgtcctccccgaagtgcaggtgtaaagacggctgcacagtcatccccaaagtgact
gtggacccgcccagacccagaaccacacccctcctcgccaccacggcaacgaccgcggct
cctgtgacagtggctcctcccactgccgcagctaccactgttccaaccatagcatccaca
gttaccacggtaaccactgccatggaaacaaccagcctacttctgactgatgcttcaacc
actacagcttcaacaacaaccactgttccaacgacaacaacaactgttccaacaacaaca
actgttccaacaacaactgttccaacgacaactcttccaacaacaactgttccaacaacc
accattccaagaacaacaacaactgttccaacgacgacgacaacaacaaccaccattgtc
ccaacaactgttccaatgacaacaactgtaccaaccacaacagaaatggatacaactact
cataccaccaccacaagtactactactataaccacaacttctactactacaacggctagt
accatgcctgttgttaccacggtatctacagttgccttaacaaccacgatgctgccaacc
acctccctgaaaacaacaacaataagcaacaagatcaacaaggaagtgacacaaagacag
aggggagacgtgcacattcctcgacagcccggtaacaacgatgattgggagtttgacatc
gagctgggaaacacagcggaggacgcccgtgatgaccccgaggcgggggggctgcactgc
accttcgaccgcggcgtttgttcctggatgtcggaccgtgatggagatcttccctgggag
acggagctgagtcctgcaggtcaacactatctgtccgtccctgagttgaaggcgggacaa
aggagcatccgaggagctcggttggccctccaggtgcccccctcctggagccatggcgac
ctgtgcttctccttctctcattggctgacggggcatcatgtgggcgttctgcagctgttc
attaagaagaagggtcgcaatgaaaggtatggccccgccctctggagccggacaggagga
catggctggagacgcacgcaggtcaccttgacaacacgatctgtggacagagtcttgatg
aaggccgagcgaaggaacggacgccggggacaaatggcggtggatgacgtcacactgcga
cagggggcgtgtcgatga
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