Oryzias melastigma (Indian medaka): 112156758
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Entry
112156758 CDS
T07439
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112156758 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112156758 (setdb2)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112156758 (setdb2)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112156758 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
112156758 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
112156758
NCBI-ProteinID:
XP_024144859
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All DBs
Position
LG2:16386771..16394663
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AA seq
635 aa
AA seq
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MLTSCCVEMEDNLLDPQELDRAKIFWAKEDVDQRFIDVFGYLEHLKSVLRSSTATDKEYI
QGLRLLELLDCSSSSDLQDQDSSVVQVVIGSGEVLPADLPDPSPPCATSEESSSSAAPPA
GREELLPPLVPVQLQYQPHQCSKACLPLLPRMPQPTLPFWGQNPLKVPLLCGFRRLTSQL
GGGVSPSGEEEDEEEEEKEKEETAAETDVFYKAPCGQSLRSFEDVAVFLVATESYDLLQV
NFFTFNPSVQLDPPSVMGAQPPNKDLSRGQELTPVELCLTDGDSQPPEFRYRKDRWPHGC
FLSRGPTLFRACCDCTDGCSDAQSCACVAMTAWRRSYSYLRLLRPVEPGLFECGPWCDCD
RARCQNRLVQRGIRVRLQVFQTEDRGWGVRCRDDLDRGTFVCIYAGVVLQKVLSSDEMPP
PKLTRADLPSDDEVEVVTEWRAPPVLEERRNVDTPPPCTNVPVIQTPAEATPLDQQVQTV
VVGGPDLLSSSTGDLQEMKIRLRTGGQASNRPKRDPHRGLKRAAIMEDVCFVDASKEGNV
SRFINHSCQPNLFIQNVFIDSHDPLFPVVAFFTSRAVKAGTELTWNYSAYTPGPPQQKQE
VPCLCRSDECQQWLLIDDDVSSLLYNEENTVTKTT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgctaacttcctgctgtgtggagatggaggacaatctgctggatcctcaagaactggac
cgggccaaaatcttctgggccaaggaggatgtggatcaacgcttcatcgatgtgttcgga
tacctggagcacctgaagtcggttttaaggagcagcaccgccacagacaaagagtacatt
cagggtctgcggctcctggagttgctggactgctcctcctcctccgaccttcaggaccag
gactcctctgtggttcaggtggtgatcgggtcaggtgaggtgctgccggcggaccttccg
gatcccagccccccctgtgctacttcagaagagtccagcagcagtgcggccccccctgct
ggcagggaggagttactgcctcctctggttccggtgcagctgcagtaccagcctcaccag
tgcagcaaggcgtgtctgcccctattacccagaatgcctcagccgacgctgccgttctgg
ggccagaaccctctcaaggtgccactgctctgcggcttcaggaggctgacgtcgcagctg
ggagggggcgtgtccccgagcggcgaggaggaggacgaggaggaggaggagaaggagaag
gaggagacagcggctgaaacggacgtcttctacaaggcgccgtgcggtcagagtctgcgc
agctttgaagacgtggcggtcttcctggtggcgacggagagctacgacctcctgcaggtc
aacttcttcaccttcaacccctccgtccagttggaccctccctcggtgatgggcgcccag
cccccgaacaaggacctgagccggggtcaggagctcacgccggtggagctgtgcctcacg
gacggagactcccagccccccgagttccgctacaggaaggaccgctggccgcacggctgc
ttcctgagccgaggccccacgctgttccgcgcctgctgcgactgcacggacggctgcagc
gacgcccagagctgcgcctgcgtcgccatgaccgcctggaggcggagctacagctacctc
cgtttgctgcggcccgttgagccggggctgtttgagtgcggcccgtggtgcgactgcgac
cgcgcccgctgtcagaaccggctggtccaaaggggcatcagggtgcggctccaggtcttc
cagacggaggaccggggctggggcgtgcgctgccgggacgacctggaccgtggcaccttt
gtgtgcatctacgcaggcgtggtcctgcagaaggtgctgagctccgatgagatgcccccg
ccgaagctgacgagagccgacctgccatcggacgacgaggtggaggtcgtgacggagtgg
cgagccccacccgtcctggaggagcgcaggaacgtggacacgccgccgccctgcaccaac
gtccccgtgatccagacgccggcagaggccacgcccttagaccagcaggtgcagacggtg
gtggttggaggtccagacctactttcctcctccacaggtgacttgcaggaaatgaagatc
aggctgaggacaggcggtcaggcctcaaacagaccaaagagggatcctcacagaggtctg
aagagagccgccatcatggaggatgtttgttttgtggacgccagcaaggaaggaaacgtg
agccgtttcatcaaccacagctgccagccgaacctgttcattcagaacgtcttcatcgac
tcccatgatcctctcttccccgttgtggcctttttcaccagcagggcagtaaaggccggc
actgagctcacctggaactactccgcctacacacctggccccccgcagcagaaacaggaa
gtgccttgtctgtgtcgcagtgacgagtgtcagcaatggctgctcatcgatgatgacgtt
tccagtttgttatacaatgaagaaaatactgtaacaaaaactacataa
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