Oryzias melastigma (Indian medaka): 112158691
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Entry
112158691 CDS
T07439
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04020
Calcium signaling pathway
oml04148
Efferocytosis
oml04218
Cellular senescence
oml04310
Wnt signaling pathway
oml04370
VEGF signaling pathway
oml04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112158691 (nfatc2a)
04370 VEGF signaling pathway
112158691 (nfatc2a)
04020 Calcium signaling pathway
112158691 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112158691 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
112158691 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112158691 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112158691 (nfatc2a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112158691 (nfatc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
112158691
NCBI-ProteinID:
XP_024147928
Ensembl:
ENSOMEG00000017259
LinkDB
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Position
LG7:20931736..20955767
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AA seq
890 aa
AA seq
DB search
MTSFYDGKDLEGELSGLGGPDDDLRFEYLFEYEPPCAGDFPAGDQDDPNLTSHKVLSPES
EQAFPLDGTSPYRIKSCSPSYSEQTGGVLSGFDGQEARNYLDGSRPPGVALSPRIEITPS
REHYSHGRDSLQNQHLNISPRPTLTVPGHDALAYREPQCLSPASSNSSTSWHSESYSPWA
SPCVSPSGGQNPGDLCPRLQNIHTGSPRTSPGTSPRTSLTEDGCLGQRSPSPRAGSRSTS
PQGKRTYDMYKNPALVPGHRSRSPSPHQDPNTGANYTHSGLSDGMNGFGCGQPGLVPTKI
VKTSNQVYTLYQENHGDGNYLVSCNQDGKAKPAAEPFFVIPQIWPKPLVPSICSIPVASL
PPLEWPLPSRTDQYELQVEVQPKPHHRAHYETEGSRGAVKAPNGSHPVVQLHGYRGKDPL
GLQIFIGTADERVLKPHAFYQVHRITGKTVTTTSYEKVVHGTKILEIPLEPKNNMKALID
CAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASNPIECSQRSA
HELPMVEKQDMDSCSVLGGQQMILTGQNFSSDSKVIFLEKTQDGQQIWEMEATVDKDKSQ
PSMLFVEVPTYRDTSVCQSVKVNFYVINGKRKRSQPQHFTFTPLACPSIKTEPLDEYEAD
HMAFAMPHILGLSPQSYYHNPRGILHPDNGLVSNMASCQRLSSSLPNQDVLFRQQSPAIV
YSRGGKSMSGNPGIWQTGVPDSHRSVLVHTGSPAQPVGPLSAGQHPSIIQFSPTNHHMIR
PGDAQTLPPPPPPDSQQVIYCDTFPPQAAVANQPSAHPEAQAPLAHPQHCQTVIQQQKSQ
APPAGMESPRDGQRPVTVKEENLDQAYLDDGELNEIIRKDLTGVQARGQT
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttttacgacgggaaggatctggagggagagctctccgggctcggcggcccg
gatgacgacctgcggttcgagtacttgtttgaatacgagccgccgtgcgccggagacttc
cccgcgggagaccaagatgaccccaacctcacatctcacaaagtcctcagtcctgagtcg
gagcaggccttccccctggatgggacctccccatacaggatcaagtcctgcagcccctcc
tacagcgagcagactgggggggtcctgtctgggtttgacgggcaggaggccagaaactac
ctggacggctctcgccctccaggcgtggccctgagcccccgcatcgagatcaccccctcc
cgcgagcactacagccacggccgggactcccttcagaaccagcacctgaacatcagcccc
cggcccaccctcaccgtcccgggccacgacgccctggcctaccgcgagccgcagtgtttg
agtccggcgagcagcaactcctccaccagctggcactccgagagctactccccctgggcg
tccccctgcgtgtcccccagcggcgggcagaaccccggcgacctttgccctcgcctgcag
aacatccacactggctcgccccgcacctcccctggcacctccccccgcaccagcctgact
gaggacggctgcttgggccagcgctcgccctccccccgggctggctcccgctccacctcc
ccgcaggggaagcgcacctacgacatgtacaagaacccggcgttggtgccgggccaccgc
tcccgcagtccgtccccgcaccaggaccccaacaccggggccaactacacccacagcggc
ctctctgatggcatgaacgggttcggctgcggtcagccgggtctggtccccaccaagata
gtcaagacctccaaccaagtctacactctgtaccaggagaaccacggggacgggaactac
ctggtgtcctgcaaccaggacgggaaagccaaaccggcagcagaacccttcttcgtcatc
cctcaaatctggcccaaaccgttggttcctagcatctgcagcatccccgtggcctccttg
ccgccgctggaatggcccctcccgagtcgcaccgaccagtacgagctgcaagtggaggtg
cagcccaaaccccaccacagagcgcactacgagaccgagggcagcaggggggcggtgaaa
gcccccaacggcagccatcctgtcgtgcagctgcacggctacagaggcaaggatccactc
ggcctccagattttcatcggcacggcagacgagcgcgtcctcaagcctcacgctttttac
caagttcaccggatcaccggcaaaaccgtcaccaccaccagctatgagaaggtcgtccac
ggcaccaaaatcctggagatcccactggagcccaagaacaacatgaaagcactaatcgac
tgcgctgggatcctgaagctcaggaacgccgatatcgagctccggaaaggagagacggac
gtgggtcggaaaaacacccgggtccgccttgtgtttcgggtccacatacctcagcctgga
ggacaacacgtctccctccaagtggcctcgaaccccatagagtgctcccagcgctcggca
catgagcttcccatggtggagaagcaggacatggacagctgctccgttctgggcggccag
caaatgatcttgaccgggcagaacttcagctccgactctaaggtcatttttctggagaaa
acccaggatggccagcagatctgggaaatggaagcaaccgtagacaaagacaaaagccaa
cctagcatgctgttcgtggaggtgccgacttaccgggacacttctgtctgccagtccgtc
aaagttaacttctacgtcatcaacggcaagcgaaagcgcagccagccccagcatttcacc
ttcactccactggcgtgtccatccattaagacggagccattagatgagtacgaggccgac
cacatggccttcgcaatgccccatattttaggcctatctcctcagtcatactaccataac
cctcgtgggatcctccaccctgacaacggcctggtttctaacatggcgtcctgccagcgt
ctaagttctagcctcccaaaccaagatgtacttttccggcagcagagcccagctatcgtc
tactctcgtggtggaaaaagtatgagtggcaatcctggcatttggcaaactggggtacct
gactcccaccgttcagtcctggtccacacaggctcaccggctcagcctgtcgggcccctc
agtgcaggccagcatccttctattatccagttctccccaaccaaccaccacatgattcgg
ccaggagatgctcagactctccctcctcctcctcctccagacagccagcaggtcatttac
tgcgacacctttcccccacaggccgcggtagccaaccaaccttcagcacaccccgaggcc
caggcaccgctggcccacccacagcactgtcaaacagtgattcagcagcagaagagccaa
gccccacccgcagggatggagtccccaagagacggacagaggccggtgacagtcaaagag
gagaacttggaccaggcttacctagatgacggtgagttgaatgaaatcatcagaaaggat
ctgacaggcgtccaggccagagggcagacatag
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