Oryzias melastigma (Indian medaka): 112161409
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Entry
112161409 CDS
T07439
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112161409 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112161409 (lrit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
LRR_1
fn3
Ig_2
C2-set_2
LRR_5
DUF6161
Motif
Other DBs
NCBI-GeneID:
112161409
NCBI-ProteinID:
XP_024152260
Ensembl:
ENSOMEG00000004590
LinkDB
All DBs
Position
LG15:complement(21182029..21187005)
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AA seq
651 aa
AA seq
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MLPLVLLVLCMVTGELVFPVSSCPSQCSCFYHNLSDGSKARSVICNDPEISTVPNGFPVD
TSKLRIEKTSIKTIPSEAFSYLSSLEFLWMSFNTLSTLSPDSFQGLDNLEELRLDGNDLN
AFPWESLMDMPSLRLLDLHNNQLTLLPADATTYIKNLTYLDLSSNSLLSLSAEVLSTWLA
AKPTQGPESSKMILGLHDNPWVCDCRLFDLVQFQKSPTLSVAFIDTRLRCSAPESLSGVL
FSDAELRQCQLPSVHTAVARVRSPVGNNVLLRCGTIGVPIPDLTWRRADGQILNGTVQQE
TSKEGITWSILSVPAVSFRDSGKFICTASNYAGNAEAIISLVVSNSSKLEGNQTANDKKP
KVKKPNQMGKAAYQEKLVARYVAQTSSSSSSSTADPDLSPGPGPDQGPASYSLTDRAPQG
AATSSNPDGLLDLEKTNLSNLAANTSSLQQDPDRLVRSVKVVGDTDNTISLNWRAPKAKN
TTAFIVLYAVFGERDMRKINVGAGQTRVTIDGLVPRTKYIACVCVKGLIPKKEQCVIFST
DEAASATGTQKLINVIVITVACVIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPATKAKGLEGEYLNRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccttggtgctgctggtgctctgcatggtcacaggggaactcgtctttccagtg
agctcctgcccttctcagtgcagctgtttctaccacaacttgagtgacgggtcaaaagcc
aggagtgtgatatgcaatgatcctgagatatctaccgtgccaaacggatttcccgttgac
acatccaagctgcggattgagaagacgtccattaagacgataccaagcgaagccttcagc
tacctctccagcctggaattcctgtggatgtccttcaacactctgtccaccttgagtccg
gacagtttccagggcctggacaacctggaagagctccgtctggacgggaatgacctcaac
gcctttccgtgggaatccctcatggacatgcccagcctgagacttctcgatttgcacaat
aaccagctcaccttgttgcccgctgacgccaccacgtacattaagaacctcacatacctg
gatctgtccagcaacagcctgctgagcctgtcggcagaggtgctgtcaacgtggctggcc
gcgaagcccacacaaggtcctgagagctccaagatgatccttggtctccatgacaacccc
tgggtatgtgactgccggctctttgacctggtccagtttcagaagtcgcccactctttca
gtggcattcatcgacacaagactgcgttgttccgccccggagagcctgtccggggtgctg
ttcagcgacgcagagttacgtcagtgtcagctcccgagcgtccacacagctgtggcacga
gtccgcagccctgtcggaaacaacgtgctgctccgctgtggcaccatcggagttcccatt
cccgatttgacctggcgcagggcagatgggcagatcctcaatggaacagtccagcaggaa
acatcgaaggagggaatcacctggtccatcctcagtgtcccagctgtgtccttccgggat
tcagggaaattcatctgcaccgcctccaactatgcagggaatgccgaggccatcatttcc
ctcgttgtctccaactcatcaaaacttgaagggaatcagaccgccaacgacaagaagccc
aaggtcaagaaaccaaaccaaatgggcaaagcggcttatcaggaaaaactagtggccaga
tatgtagctcagacctcctccagctcatcttcgtccaccgcggatcctgacctttcacct
ggtcctggtcctgaccagggaccggccagctatagtctgactgacagggccccccagggg
gccgccacttcctccaaccccgatggtcttcttgacttggagaagacgaatctgagcaac
ctggcagccaacacttcatcgctgcagcaggaccccgacagactggtccgctccgtcaag
gtggtgggggacactgacaacacgatctccctgaactggagggcacccaaagcaaagaac
acaacagcgttcatcgtgttgtacgccgtgtttggagagcgagacatgaggaagataaac
gtgggagcagggcagacgcgagtcaccatcgacgggctggtgcccaggaccaagtacatc
gcctgtgtgtgcgtgaaggggctgatccccaagaaggagcagtgtgtcattttctccacc
gatgaagccgcgagtgcgacaggcacccagaagctgatcaacgtaatagtgatcaccgtg
gcttgtgtcattgcagtcccactcacggttatcgtttgttgtggggccctgaagagacgc
attcaaaagtactggggcaagaaatcgaaggacattcaagattcatatgtgacttttgaa
actctgtcgcccgctactaaagctaaagggctcgaaggcgaatacctgaacagactgaac
cccgaagagtccaacaggctgctgtcggcccgctccagcctggactcggaggccacggct
aaaatagagggacagcctaacgagtacttctgctga
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