Oryzias melastigma (Indian medaka): 112163345 Help Entry 112163345         CDS       T07439                                  Symbol rc3h2 Name (RefSeq) roquin-2 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism oml  Oryzias melastigma (Indian medaka) Brite KEGG Orthology (KO) [BR:oml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:oml03000]     112163345 (rc3h2)    04121 Ubiquitin system [BR:oml04121]     112163345 (rc3h2) Transcription factors [BR:oml03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     112163345 (rc3h2) Ubiquitin system [BR:oml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     112163345 (rc3h2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 zf-C3HC4 zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  112163345 NCBI-ProteinID:  XP_024155465 Ensembl:  ENSOMEG00000023540 LinkDB All DBs Position LG12:14681195..14706046 Genome browser AA seq 1143 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSSSHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD IDLLPVNCALLQLVGAQVPDVQPVSLSTAAEAEHYEVCRVCVEELALYLKPISTTKGVAN LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRACRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTADPANLTSLRPHLELLANI DHNPDAPSPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDPPQPQANSKYKTSMCRDLR QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSCVGRAFPLAPGVMNKTFTMEASIHADVSA GVGPDLKGTAENAETKTEGVPGLPHPSLISRSTDGKRSVPNGISGGGNGVPGANRTPTGS TDPKPVSPPRTPASLSSSSSPLSTAGRVDSGAPLPRHSQFILPSPHPSQVSELYYQEPHP AFDTGHYQPTSGSYYQSSLHPPHKPCMAPFLRSSNVPESSLPPSMGPSHSLYPNDPQAPH SPTSTGYPSHSPRDRIGVFHSRPGQPQYGPLAHTGVYAPLYDSRRVWRPQLYHREDPRSN SLPPEVLHSSVYQPPLRERFNSLDSNYCSGSEHRTGLHRDYGRVNLGYEELFRRKHEQWA HHHHHHHHHSANRPSQSSPIFTIDFGKEHVEGGGGQCVGCRFRSEESLAHYSPWSCGTVG PCLSPFEPESRAHAPAHSCSERSELDNPEGGGGGVNGVGKRWLPSLDHCRRLKDEDPIIP FSEGPIISKWGAISRASRTGYHTTDPVQATACQGSASSTTPVNFKDYNPRLDHGEYKWSS RGSDSSSHSSFLESEHLYASDLHGRRTSISSGDKNLSDLQAHQTPFSHTRDESELDPDRD IELELRALNMEDSDHQEAKSQDSLDLASPQSQDASHLLPSPCLSPLLSSPAAELPQTEDP VTEKMNAHKLKKMAFRKSLSPGGLVSGGLGVGKLVLRTGPPQLGDVTRPCPEKPPAEMLL NRS NT seq 3432 nt NT seq  +upstreamnt  +downstreamnt atgccggtgcaggcggcccagtggacagagttcctgtcctgtcccatctgctacaacgag tttgacagcagcagccaccagcccatcagtctgggctgctcccacacagtgtgtaagacc tgcctgcacaagctgcaccgcaaggcctgcccctttgatcagacccccatcagcaccgac attgacctgctgcctgtcaactgcgccctgctccagctggttggagctcaggtccctgat gttcaaccggtgagcctgagcactgctgccgaggctgagcactatgaggtctgcagagtg tgtgtggaagaactggctctctacctgaagcccatcagcaccactaaaggtgtggccaac ctgagtccgagcgtgctcagtcggcccatgcaaaggaagctggtgaccttggtgaactgt cagctggtggaggaggagggccgcgtgcgggcggtgcgagcatgccgctctctgggggag cggaccgtaaccgagctcattctgcagcaccagaacccccagcagctgtctgccaacctg tgggcggcggtgagggcgcgcggctgccagtttctgggacctgccatgcaggaggatgcc ctgaagctggttctgctggctctggaagatggctccgctctgtccaggaaggtgttggtt ttgtttgtcgtccagaaactggaggcccggttcccccaggcttctaaaaccagcataggt catgtggtgcagctgctctacagggcttcctgcttcaaggtgacaaagcgtgacgaggac tcctcgttgatgcagctgaaggaggagtttcgtagctacgaagccttgaggagagaacat gacgctcagatcgtccacatcgccatggaagcgggcttacgcatctccccagagcagtgg tcctctctgttgtatggagacctggttcacaagtcacacatgcagtccatcattgacaag ctgcagtcgccagagtcttttgcaaagagcgttcaggagctgacaatcgttctgcagagg acagctgaccctgcaaaccttacaagccttagaccacatctagagctactggccaacata gaccacaacccagatgccccctcgccatcgtgggaggagctggaaagtgtaatgctggct gtaaaactggtcgttcacggactcgtggagttcatacagaacttcagcaagaagagccac gaccctccacagcctcaggccaacagcaagtacaagaccagcatgtgccgagatctccgt cagcagggaggctgtcctcgaggcaccaactgtacattcgctcacacacaagacgagctg gagaaattccgactgaggaacaagaagagcagctgtgtgggtcgtgcattcccactcgcc ccaggtgtgatgaataaaacattcacgatggaggccagcatccacgctgacgtgtctgca ggggttgggccggacctaaaaggcacggcggagaatgcagagaccaagacggagggagtt cctggcctgcctcacccgtccctgatctccagaagcaccgacgggaagagatccgtgcca aacggaatcagtggcgggggtaacggggtgccaggagccaacagaactccaactggatca acagacccgaagcccgtctctcctcccaggacgccggccagcctctcatcatcatcctcc ccgttgagcacagcaggccgtgttgacagtggcgcccctctaccccgccacagccagttt attctgccttcaccacatccgtctcaggtgtccgagctgtactaccaagagccccatcct gcctttgacacgggccactatcagccaacctcaggttcctattatcagtcctctcttcat cctcctcacaagccctgtatggctcccttcctccgatcgtccaacgtgcccgaatcttcc ctacccccatccatgggcccttcacactctctttaccccaacgacccccaggcgccacac tctcccacttctacaggatacccgtcacactcgcccagagaccgaataggagtgttccat tcccgcccaggacagccccaatatggacctttggctcacactggtgtctacgctcccctc tatgacagcaggagagtctggagacctcaactgtaccacagagaagacccccggagtaac tctctgcctccagaggtgctgcactcttctgtgtaccagcctccactcagggagagattc aactctctagacagcaactactgttctggatctgaacatcgcacagggctgcacagggac tacggtcgcgttaatctgggctatgaggaactgttcagacggaagcacgaacagtgggcg caccaccaccaccaccatcaccatcacagcgccaacaggccctcccagtcttcccccatc ttcaccatcgattttggaaaagagcatgtggaaggtggtggaggtcagtgtgtggggtgc agattcagaagtgaagagagtctggctcactactctccctggtcctgtggcactgttgga ccctgcctgagcccctttgagcctgaaagtcgagcacacgcaccggctcattcctgctcg gaacgctcagagttggacaatcccgaaggaggaggtggtggcgttaacggggttgggaag agatggctgccttccttggatcactgccgccgtttgaaagacgaggatcccattattccc ttcagcgagggcccgattatttccaagtggggggcaatttctagagcgtcccgcacagga taccacaccactgaccctgttcaagccaccgcctgccagggcagcgccagcagcaccaca cctgtcaactttaaagattacaacccccgcctggatcacggtgaatacaagtggagctcc aggggatctgattcttccagccactccagcttccttgagagtgaacatctgtatgcatcc gacctgcacggccgtcggacgtccatcagcagtggagacaaaaacttgagcgatctgcag gcccatcagacgcccttcagtcacacgcgggacgagagcgagctggacccagaccgagac atcgagctagaactacgcgcactaaacatggaggactcggaccaccaggaggccaaatct caggactctttagatctggcgagcccacaatctcaggatgcttcccacctcctcccatct ccctgcttatcccccctcctttcatctcctgctgcggagctcccccaaacagaggatcca gtgacagaaaagatgaatgcccacaagcttaaaaagatggcttttagaaagtctctgtct cctggaggactggtgtcaggagggttaggggtcgggaagttggtgctgaggactggacct cctcagcttggcgatgtgaccagaccctgtcctgaaaagcctcccgcagagatgctgctc aatagaagctga

DBGET integrated database retrieval system