Oryzias melastigma (Indian medaka): 112163393
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Entry
112163393 CDS
T07439
Name
(RefSeq) low-density lipoprotein receptor-related protein 2 isoform X1
Organism
oml
Oryzias melastigma (Indian medaka)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
hEGF
DUF4365
Motif
Other DBs
NCBI-GeneID:
112163393
NCBI-ProteinID:
XP_024155528
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All DBs
Position
LG12:17045733..17073892
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AA seq
2850 aa
AA seq
DB search
MDLRFFTCALFLASLCGTGGQRLGCPEGKWQCDDGQCISKAWRCDGRGDCLDGSDEMDCA
EVLGSECPSGQFSCLDSVGCVNASARCDGKIQCPTGSDEESCPPTRGCLDSDWMCRNGIC
IPKELRCNQENDCMDNSDEDDCGACGEGSMLCPEGKCVSPEDMCDGQLHCSDGSDEPTTC
GHICSMNNGGCSHRCTDESWGSRCDCPAGFKLSSDGAICEDVNECASAFPPCAHYCKNTI
GSHFCHCKKGFKLNDGSTCLALGNASRLLTVQRSTLGLLNVKSQQFSVLQTSVSDAVALT
YDIARGWHYWADSRGSIYKTIGQQSRAVYTGEAGIQALACDWLNGYLYWTNLKMESIYMQ
MPDGSYTTLLNKNVKPSGLVLLPVESLMFWINAGPGERVTIERSWMDGSDRSTLTVLTAQ
FAHSLTADVAARRLYWISDFKRSVETVGVDGTGRYSFPGVFSRRPALSLAVFESMFYWVD
SRGLWEAPQNKPTKRKFLWKTGVPLLTVYHELQQPKESSACAKAPCELCQLTKNNLVGFT
CACPDSKVLLPDGNCDFLRFIYATITTINLLEFEGGHHTETQLFTTDDGILSFDLDWYRD
WLYWANETGHVKRKKLAQVQIEVIPMPLPVCLISLDQQNENLYWVSCDQNTIGTTTGGKN
YPKRLYHTALEISSLYLDWLRSKLFWMEEDRLYSMDLSGGKAELLLKIAEGVRGDIAFDL
RASSLLWNSERGGLVTLSLLKEKTHQAGRRWNVSGSVMAAFEPFLLCSSDHVITLWNRRN
GSVMQHVKVKGQVMSVIPALGNVKTVPDPPVCNEPFLLCRHSALCLPNSQVCDGKRDCPD
GDDEEFCVVTCPSKGEFKCKDRRFCISGSLVCDGRSHCRDGSDEVDCPTVASPVTLKNIL
KCRMGSKPCEDGTECVLFSHVCDGEQDCKDGSDELGCETDVGPSGTRPPTVPACSSPSVL
CPSTATHVCISQSQFCNGVKDCPDGFDEQNCLEKCLSRTDFLCKDRRSCVSKNQVCDGRS
HCHDGSDEVNCASEGPRAPQKAELKCRFGSKLCRDGTECVLLSHVCDGEDDCQDGSDEEE
CDVPESKTAGKDLKKSPPIVQSVTEAPKKPACSSPSVLCPGSSLCIKPTQMCDGRRDCPD
GSDEKCVKRCPSASDFRCKDRRSCVSKNQVCDGRSHCHDGSDEVNCASEGPRAPQKAELK
CRFGSKLCRDGTECVLLSHVCDGEDDCQDGSDEEECENKAAEKDLSVTEAPKKPACSSPS
VLCPGSSLCIKPTQMCDGRRDCPDGSDEKCLKRCPSASEFLCKDRQSCVLQSQVCDGRSH
CLDASDELNCPSTAPLPKSSNALKCRFGSTLCRDGTECVLLSHICDGETDCEDGSDEDAC
DAAAEKSPSTSVKNDVMSLSPALIPSVTEAPKKPACSSPSVLCPGSSLCIKPTQMCDGRR
DCPDGSDEKCVKRCPSASDFRCKDRRSCVSRSQVCDGRAHCNDGSDELNCAGEAAAAPQK
ADLKCRVGSRLCRDGTECVLFSHVCDGEPDCRDGSDQEDCDEVEKAAETPKPSCSFPSVQ
CPDSTICINPAQLCDGIRDCPDGSDENCVKNCADESDFLCKDRRSCVSKSLLCDGRSHCY
DGSDEANCQSVAAPESKSAVLQCRMGSRPCDDGKECVLYSHVCDGEEDCLDGSDEKECQE
TCKQGEFQCAHGKMCIPESEVCDGRPQCQDRSDELDCWEKTKSCEFRCADGKRCIPQKFL
CDGEMDCLDGSDEVECDSSPLAPTGSTVPTSVCAAPSVLCPGSPVCVSQQQLCDGRRDCP
DGSDEESCVFKCQNAEDFLCSDHRKCVSKIHVCDGRSHCPDGSDERQCQTADLSPTSSPN
VPRVRTEPVKCRKGFKACKDGLECVMYSHVCDGEQDCKDGSDEEGCETRCKTGEFQCAHG
NRCIPQKGVCDGQRDCQDGSDEINCSSLTEGCNHRCDNKTRCVPQTFLCDGERDCADGSD
EEKCGLVPCSLYQFRCTSGQCVSEALRCDGYPDCRDRSDEAGCAKQPRCPAQLRCPHSHE
CLQEEWLCDGEEDCKDGSDEKNCNAPPAKCRDHQWPCRDGRCIPLFWRCDGKEDCHDGTD
EEKCLQRKCPPHLYQCGSGECLDPSLVCNGLTNCADRSDEGVECSHHNCSSPSAPLCDQQ
CMSTPRGPKCYCASGFKLQSGTVFCVDTDECSSAVSPCKHSCVNTRGSYTCHCHPGFYLE
PDNKSCKTRDEPLLLASVQSELLLLGVHSGTLKLLSTANRPVFSVDFDWTQRRVYWLSPT
FQSIRWADMKNSNKGTLIKGVKSDAIAVDWVGKNLYWVEGLVGQILAVKLGTSIVRSQDH
AVVLGEDLEQPSSLVLLPHKGFMLWSEIGSSPQIKRAGMDGSKRKVLVSHDLSWPVSLAY
DFLDDRVYWADEKLHCIGSSTLDGENIKILQLAETPSPFSLAVFSDRIFWSDTKRRAIRS
ADKKTGKDQKVLLKRPGQPFGLRVMHALSQPALPNPCVYLHCSHLCLLAPAAQSKSGAAE
SPAAVCRCPKGLLLSQDKRTCSLPQESSFILLLSHHTVYQIYLRSMRHEGIALKKMPNGR
DFPLSGEKEPLGLDLSIPQLSLFVAYAKESVNVLKLSSSDSKAGLSPAGQILTLMLNESV
TALAVDWVTSNLFWSSSERPDIHVTTREGLTTSLLQRSLMGIFSIALHPLSGRLCYIATV
MKERKGQTEVDCAWMDGHNKAVLWKKSSVPISLVFSIEGTVIYWADSGEGVIGSIGVDGL
GYQEYKTGSNLLVSFTRIENIFIWAARDKDVTKLWFSDGLQPKQLWFETKTTVLEVRAYN
ESQSGKDFKDIVSGRRKTRCIKYICTQGRS
NT seq
8553 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcgcttcttcacttgtgcacttttcctggcgagtctatgcggtaccggaggc
caacgcttggggtgccccgagggaaagtggcagtgtgatgatggacagtgcatctctaaa
gcttggaggtgtgatggacggggagactgccttgatggttctgatgaaatggactgtgcc
gaggttttggggtcagagtgtccctctggccagttctcctgcctggactctgtcggctgc
gttaatgcctctgctcgctgcgatggaaagatccagtgtccgaccgggtctgatgaagag
agctgtccacccaccaggggctgcctagactctgactggatgtgtcgaaacggcatctgc
atcccaaaggaactgcgctgcaaccaagaaaatgactgtatggacaactctgatgaggac
gactgtggtgcgtgtggtgagggcagcatgctgtgcccggaggggaagtgtgtttctcct
gaagatatgtgtgacgggcagcttcactgttcagacggcagcgatgagccaacaacctgc
ggccacatctgctccatgaacaacggcggttgcagccaccggtgtaccgacgaatcctgg
gggtcccgctgtgattgtcctgctggctttaagctctcttcagatggtgcaatctgtgaa
gatgtgaatgagtgcgcttctgcctttcctccttgtgcgcattactgcaaaaacaccatt
ggatcccacttttgtcactgcaaaaaaggtttcaaactcaacgacggctccacatgtctt
gctttaggtaatgcatcccgactgctgactgtacagagaagcactttagggcttttgaat
gtaaaatctcagcagtttagcgtcctccagacctcagtgtcggatgcagtggccttaacc
tatgacatcgccagaggatggcactactgggctgatagccgtgggagcatctacaaaact
attggacagcaaagccgggcggtctacacaggtgaggctgggatccaggcgctggcttgt
gattggctgaatggatacctttactggaccaatctgaagatggagtcgatctacatgcag
atgcctgatggaagttacacaactctgctaaacaaaaatgtcaaaccgtctgggttggtt
cttctgcctgttgaaagtttgatgttctggatcaatgcgggtccaggtgagagagtgacc
attgagaggtcctggatggacgggtcagacagaagcactctgacggtcctgactgcgcag
tttgctcacagcctcacagctgacgtcgctgccaggaggctgtactggatcagtgacttc
aaacggtccgtagagactgtgggggtggatgggactggccgttactcgtttccaggagtg
ttcagccggaggcccgctctgagcctggcagtgtttgaaagcatgttctactgggtcgac
agcaggggactgtgggaggctccacaaaacaagccgaccaaacgcaagtttctgtggaaa
accggagttcccctgttgacggtctaccatgagcttcagcaacctaaagaatcttctgct
tgtgcaaaggctccatgtgaactctgccagctgactaaaaacaacctggttggattcacc
tgtgcttgtccagattccaaagtgctgttgccagatgggaactgtgactttctgaggttt
atttatgctactattacaacaatcaacttgctggagttcgaaggtggacatcacactgaa
acccagctcttcaccacggatgatgggattctgtcctttgatcttgactggtacagagac
tggctctactgggccaatgaaacgggtcatgtcaaacgcaaaaagctggcccaagtgcag
attgaagtgatcccaatgcctctgcctgtttgtctgataagtttggaccagcaaaatgaa
aatctttattgggtgtcatgtgaccaaaacaccattggcaccacgactggtggtaaaaac
taccccaagcgcctgtaccacacagcactggaaatatccagcctgtacctggactggttg
aggagtaaactgttctggatggaggaagaccgactctacagtatggacctatcaggaggc
aaagctgaactgctgctgaaaatagcagaaggggtcagaggtgacattgcctttgacctc
agagccagcagtctgctctggaactctgaaagaggaggcctggtaacactaagtttgtta
aaggagaaaacccaccaagcgggaaggagatggaacgtgtctggctctgtaatggcggct
tttgagcccttcctgttgtgctcttctgatcatgtgatcactctgtggaaccggcgcaat
gggagcgtcatgcaacatgtcaaggttaaaggtcaagttatgagtgtaatccctgcactt
gggaatgttaaaacagtgcctgatcctcctgtgtgcaacgagccgttcttgttgtgccga
cactcggctctctgcctcccaaactcccaggtttgtgatgggaagagggactgcccagat
ggagacgatgaagagttttgtgtggtcacatgtccatccaaaggggaattcaaatgcaag
gacagaagattttgtatctctggaagcctcgtgtgcgacggccgttctcactgtcgggac
ggctcagatgaagtggactgtcccactgtagcctctcctgtgactctaaaaaatatcctc
aagtgtcggatggggtcgaagccgtgtgaagacggcacagaatgtgttttattcagtcac
gtgtgtgatggagagcaggactgtaaagatggatcggatgaattaggctgcgaaacggat
gttgggccatcaggtacccgccctccgactgtgccagcctgcagcagcccctctgttctc
tgcccgtccacagccactcatgtctgcatttctcaaagtcagttttgcaatggtgttaaa
gactgtcccgatggctttgatgaacagaactgcttggaaaagtgtctctcaaggactgat
tttctctgcaaggatcgtagaagttgcgtttcaaagaaccaagtctgtgacggccgctct
cattgccacgatggttcagatgaggtcaactgtgccagtgaaggtccacgagctcctcag
aaagctgagctgaagtgtcgctttggctccaagctgtgcagagacgggacggagtgtgtc
ctcctgagtcacgtctgtgatggagaggacgactgtcaggatggatcggatgaagaagag
tgtgatgttccagagagtaagactgcaggaaaagacctgaaaaaatcccctcctatcgtc
cagtcagtcactgaggctcccaaaaagccagcatgcagcagcccttcagttctgtgtcca
ggttcttctttatgcatcaaacccacacagatgtgtgacggaaggagagactgtcctgat
ggatctgatgagaaatgtgtcaaaagatgtccctctgcatccgactttcgctgcaaggat
cgtagaagttgcgtttcaaagaaccaagtctgtgacggccgctctcattgccacgatggt
tcagatgaggtcaactgtgccagtgaaggtccacgagctcctcagaaagctgagctgaag
tgtcgctttggctccaagctgtgcagagacgggacggagtgtgtcctcctgagtcacgtc
tgtgatggagaggatgactgtcaggatggatcggatgaagaagagtgtgagaataaagct
gcagaaaaagacctgtcagtcactgaggctcccaaaaagccagcatgcagcagcccttca
gttctgtgtccaggttcttctttatgcatcaaacccacacagatgtgtgacggaaggaga
gactgtcctgatggatctgatgagaaatgtttgaaaagatgtccttctgcctccgagttt
ctctgcaaagaccgtcagagctgcgtcctccagagtcaggtgtgtgacggtcgctctcac
tgcttggacgcttcagatgagctgaactgtccgagcacagctcctcttcccaaatcttca
aacgcgctgaaatgccgttttggatcaaccctgtgtcgagatggaacagagtgtgtcctc
ctgagtcacatctgtgatggagagacggactgtgaagatggatcagatgaagatgcatgt
gatgctgctgcagagaaatcaccttccacatctgtgaagaatgatgtcatgagtttgtct
cctgcactgatcccgtcagtcactgaggctcccaaaaagccagcatgcagcagcccttca
gttctgtgtccaggttcttctttatgcatcaaacccacacagatgtgtgacggaaggaga
gactgtcccgatggatctgatgagaaatgtgtcaaaagatgtccttctgcctctgatttt
cgctgcaaagaccgtagaagctgtgtctccaggagtcaagtatgcgacgggcgagctcac
tgcaacgacggctcagatgagctgaactgtgctggcgaggctgcagctgctcctcagaaa
gcggatctgaaatgccgcgtgggctccagactctgtcgggacggcacggaatgcgttctg
tttagtcacgtctgtgacggcgagccagactgtcgggatggatccgatcaggaagactgc
gatgaagtggagaaggctgcagagactccaaagccgtcctgcagctttccttccgttcag
tgtccggattcgaccatttgcataaacccggcacagttgtgtgatggaataagagactgt
cccgatggatctgatgagaactgcgtgaaaaactgcgcagatgagagtgacttcctctgc
aaagaccgccgcagctgcgtctcaaagtctctgctttgcgacgggcgctctcactgctat
gatggctcagacgaggccaactgtcagagcgtggcggcccctgaatccaagtctgctgtg
ctgcagtgccgcatgggctcaaggccatgcgatgatggcaaagagtgcgtcctgtacagt
catgtctgtgacggggaggaagactgtctggatggatcggatgaaaaggaatgccaggaa
acctgcaaacaaggagagtttcagtgtgctcatgggaagatgtgcatccctgagtcggag
gtgtgtgacggacggccgcagtgtcaggatcggtctgacgagctggactgctgggagaaa
acgaagagctgcgagttccgctgtgctgatggcaaacgctgcatcccacagaaattcctc
tgcgatggagagatggactgcctggatggctcggatgaggtggaatgcgactccagtcct
cttgccccaacaggatctacggttcccacctcagtttgtgccgctccttcagttctctgc
ccgggatctcctgtctgcgtctctcaacagcagctgtgtgacgggcgaagagactgtccg
gatggatctgatgaggagagctgtgtgtttaaatgccaaaatgcagaggacttcttatgc
agcgatcacagaaaatgcgtctccaagatccacgtgtgtgacggacgttctcactgccct
gatggatctgatgagaggcagtgtcagacagcggacctcagcccgacctcctctccaaat
gttccccgcgtccgaacggagcctgtgaaatgccggaaaggtttcaaagcgtgcaaagac
ggtttggagtgcgtgatgtacagccacgtgtgcgacggagagcaggactgtaaggacggc
tcagacgaagagggatgtgagactcggtgcaaaacaggtgagttccagtgtgcccatggc
aacagatgcatcccacagaaaggggtgtgcgacggacagagggactgtcaggacggctct
gatgaaataaactgctcaagtctgactgagggctgcaatcaccgctgtgacaacaaaact
cgctgcgtaccgcagaccttcctgtgcgacggcgagcgagactgtgccgatggttcggat
gaggagaaatgcggtttggttccctgttcgctttaccagttccgctgtaccagcggtcag
tgtgtgtccgaagctctgcggtgtgacggctatcctgactgcagagaccgctccgacgag
gcgggctgcgccaaacaaccgcgctgcccggcacagctgcggtgcccgcatagccacgag
tgcctgcaggaagagtggctctgcgatggggaggaagactgcaaagatggatctgatgaa
aagaactgcaacgctcctccagcaaagtgcagagaccaccagtggccgtgcagagacggc
agatgcattcctctgttctggagatgtgacgggaaggaggattgtcatgatggcacagat
gaggaaaaatgtctgcagagaaaatgcccccctcatctttaccagtgcggcagcggcgag
tgcctggaccctagcttggtgtgtaacggcctcacaaactgtgctgaccgttcagatgaa
ggtgtggaatgttctcaccacaactgctccagtccatcagctcctctgtgtgaccagcaa
tgcatgagcactcccagaggaccgaagtgttactgtgcttcagggttcaaactacagtct
ggcacagtgttctgtgtggatactgatgagtgcagttcagctgtctctccatgtaagcac
agctgtgtgaacaccagagggtcttacacctgtcactgccacccgggcttctacctggag
ccggacaacaaaagctgcaagacgagagacgagcctttgctcctggcctcggtgcagtca
gagctgttgcttctcggcgttcacagcggcaccttgaagcttctctctactgctaatcgg
cccgtcttctctgtggactttgactggactcaaaggagagtttactggctgagcccgaca
ttccagagcatccgctgggcggacatgaaaaactccaacaaaggaactctgataaaaggt
gtgaagtcagatgccatcgcggttgactgggttggtaagaatctgtactgggtggaagga
ctggttggccagattttggcggtgaagctggggacttccatagtccgatctcaggaccac
gctgtggttctgggtgaagacctggagcagccgagctctctggtgctgcttccacacaaa
gggttcatgctgtggtctgagatcggcagctccccacagatcaagcgggctggaatggac
gggtcaaagagaaaggtgttggtgagccacgatttgagttggccagtgagtctggcctat
gatttccttgacgaccgggtgtactgggctgatgagaagctgcactgcattggctcatcc
actctggatggagaaaacataaagatccttcagttggctgaaactccaagtccattctca
ttggcggttttcagtgatcgtattttctggtctgacaccaagagaagagccatccgctca
gctgacaagaagactgggaaagatcagaaagttctcctgaagaggcctggacagcctttt
ggactgagggtgatgcatgccctttcccagccagctctgcccaacccctgtgtgtacctc
cactgctcccacctgtgtctcctggctcctgcagctcaaagcaaatctggggcagcggaa
tcccctgcagcagtctgtcgatgtccaaagggcctgctgctctcccaggataagaggacc
tgctctctgcctcaggagtcctctttcatcctgctcttgtctcatcacacagtctatcag
atatatttgcgctccatgcgtcatgagggaatcgctctgaaaaaaatgcccaacggtcga
gatttccccctatctggagagaaagagccgctggggctggacctctccattcctcagctc
tctctgtttgtggcttatgccaaagaatctgtcaatgtgttgaaactaagcagctccgat
tccaaagcaggactctcaccggccggacaaatcctgacactcatgctgaatgagtcggtc
acagcactagcagtcgactgggtgacgtccaatctgttctggagcagcagcgagaggcct
gacattcacgtcacgacgcgtgaaggcctcacaacctcactgcttcaaagatctctgatg
ggcatcttttccatcgctcttcatcctctctcgggtaggttgtgctacattgcaacagta
atgaaggagcggaaaggtcagacggaggtggactgtgcgtggatggatgggcataacaaa
gcagtgctgtggaaaaagtccagtgtccccatttccctggtcttttccattgaaggaaca
gtcatttactgggctgactctggtgaaggcgtaattggctctattggtgtggatggtttg
gggtatcaggagtacaaaacggggtccaatctgctggtctcattcacacgcattgagaac
atctttatttgggctgcccgagacaaagatgtgaccaaactgtggttcagtgatggcctg
cagcccaaacaactgtggttcgagacaaagaccacagtgctggaagtcagagcctacaac
gagagccagtcgggtaaggatttcaaagacattgtttctggaagaaggaagacgagatgt
atcaaatatatatgcacccagggacggagctag
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integrated database retrieval system
