KEGG   Oncorhynchus mykiss (rainbow trout): 100136342
Entry
100136342         CDS       T07259                                 
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3 precursor
  KO
K05401  toll-like receptor 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217  Necroptosis
omy04620  Toll-like receptor signaling pathway
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100136342 (tlr3)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100136342 (tlr3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100136342 (tlr3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:omy04054]
    100136342 (tlr3)
   04090 CD molecules [BR:omy04090]
    100136342 (tlr3)
Pattern recognition receptors [BR:omy04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   100136342 (tlr3)
CD molecules [BR:omy04090]
 Proteins
  100136342 (tlr3)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 Tlr3_TMD TIR_2 LRR_1 TIR LRR_9 LRR_6
Other DBs
NCBI-GeneID: 100136342
NCBI-ProteinID: NP_001118050
Ensembl: ENSOMYG00000017545
UniProt: Q1PA38
LinkDB
Position
10:complement(60758519..60765411)
AA seq 913 aa
MNWPDIILIILAVNLGNLITGPTLCHASQKRQKSECQVRNGWADCSHLRLKEIPPNLPWN
ITGLDVSHNRLVELPPASLATYPGLVHLDVGFNSLTKLEDSLCQTLGLLRTLTVQHNEVH
WLREKDLSNCTNLTELNLAGNRLKLRGEPFAALQSLTLLDVSKNDLKTANLGTRLQLPSL
VTLILSSNSISTFKKDDFYFLSNSSSLRVLHLSNLTTLAKFEPDCLKPIASIYELVMNGS
KLGPSLTSKLCTELSGTAIRSLSLQKTQLVTLDNTTFKGLGKTHLTTLDLSHNSIAKIGD
GSFQWLSMLEVLSLEQNNLKRLTKNTFNGLGNLTRLNLNMALVKSRTSSYPIIDDFSFQP
LRALESLSMENTAFRNISVLTFAGLMSLRQLHLSRTSCMSLKIITNQTFVSLAGSPLLML
KLTSTAISRLDPGAFSSLGNLTTLLLGNNSISQTLTGKEFQGLGQLQEIYLSNGNQKLIL
SPMSFVHVPALRTLMLGRALTSTLYMNTSPFKPLSNLTILDLSNNNIANIKIDLLDGLEN
LKVLKFQHNNLARLWKSANPGGPVLFLRGLRSLVALEMDFNGLDEIPDEALHGLTNLQEL
SLSGNILNQLRDSVFNDLGSLRVLRLQKNLITSVRKEVFGPALANLSQLVMEKNPFDCTC
ESILWFVAWLNRTNASVPGLRDEYVCNTPQAYYNRSIMEFDRLSCQDMTPFQALYVLTST
AVLTLMVTSLLVRFQGWRIQFYWNVLINRTLGLSDASSGEGREFNYDAYVIHAAKDKTWV
ERSLLPLEDEQGYTFYLQDRDAVPGDSRLESIVENMRRSRKILFVVTETLLEDSMCRQFM
AHHALHQVIEDSRDSVVLVFLEDVQDYKLSRCLLLRRGMLRPNCLLNWPLQRERVPAFHQ
RLRIALGTTNRVQ
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgaattggccagatataatcctcattatattggctgtcaatctgggtaacctcatcact
ggccctaccctatgccacgcctctcaaaagcgtcagaaatccgaatgccaggtgcgaaac
ggctgggcggactgcagccacctccgcctcaaggagatccctcccaacctgccctggaat
atcaccggcctggatgtctcccacaacaggctggtggagctacccccagcatcgctggcc
acttaccctgggcttgtgcacctggatgtgggcttcaacagcctcaccaagctggaggac
agcctgtgtcagaccctgggcctgctgaggacactgaccgtacagcacaacgaggtacat
tggctgagggagaaggacctgagcaactgcaccaatctgacagagcttaacctggctggc
aacaggttgaagctacggggagagccctttgctgccttacagagtctgacactgctggac
gtgtccaaaaatgacctgaagacagccaacttgggcacccgccttcagcttccaagcctg
gtgactctcatcttgtctagcaacagcatatcaaccttcaaaaaggatgacttctatttt
ctcagtaattcctcatccctacgagtcctccacctgtcgaatctaacaactctagcaaag
tttgagcctgattgcttgaagcccattgcaagcatatatgagttagtcatgaatgggagc
aaacttggcccttcactcacgtctaaactctgcacagagctttctgggacagcgatccgc
agcctctccctccaaaagacacagctagttacactagacaacaccaccttcaaaggcctg
gggaagacccacctcactactttggatctatcccacaacagcatagctaagatcggggat
ggttctttccagtggctgtccatgctggaagttctttctctggagcagaacaacctcaag
cgcctgactaagaacactttcaacgggctggggaatctgacacggctcaacctgaatatg
gcgctggtgaagagtcgcacttcttcttaccctattatcgacgacttctccttccagcca
ctaagggcactggagagcctgagcatggagaatactgcctttcgaaacatctcggtgctc
acctttgcgggtttgatgagtctccgccaactccacctgagtaggaccagctgcatgtcg
ctcaaaatcatcaccaaccagacctttgtgtccctcgcaggttcaccacttcttatgcta
aagcttacaagcacagcaatctcccgtctagaccctggagccttctccagcctgggcaat
ctcaccacccttctgctgggcaacaactccatctcccagaccctgacggggaaagagttc
cagggtttgggccagctacaggagatctacctctctaacggcaaccagaagctcatcctc
agccctatgtcgtttgtccatgtgcccgctctcaggactctgatgctggggagagctctg
accagcaccctgtatatgaatacctctccgttcaagcctctgtccaacctcaccatcctg
gacctcagcaacaacaacatcgccaacataaaaattgatcttcttgatggactagagaat
ctgaaggtgctgaagtttcagcacaacaacttggcccggctgtggaagagtgctaaccca
ggtgggccggtgctgtttcttagggggctccgcagccttgttgccctggagatggacttc
aacggtctggatgagatccccgatgaggcccttcatggattaaccaaccttcaagagctc
agcctcagtgggaacatcctgaaccaactcagggactcagtcttcaacgacttggggtcg
ctccgggtgcttcggctccagaagaacctaatcacgtcggtgaggaaggaagtgtttggg
ccggctttggccaacctcagccagctggtcatggagaagaacccgttcgactgcacctgc
gagagcatcctgtggtttgtggcgtggctgaacagaacaaacgccagtgtgccgggcctc
agggatgagtatgtgtgcaacacgccgcaagcctactacaaccgctcgatcatggagttt
gacaggctctcctgccaggacatgacaccattccaggcgctctacgtgctcaccagcact
gcggtcctgactttaatggtgacctcactcctagtgcgcttccagggttggaggattcag
ttctactggaacgttctgatcaaccgtacgctcggattgagcgatgccagttccggggag
gggagagagttcaactacgacgcgtacgtcattcatgctgcaaaggataaaacctgggtg
gaacgaagcttgctccctctagaggacgaacaggggtatacattttatctgcaggatcga
gatgcagtgccaggtgattcgcgactggagtccattgtggagaatatgagaaggtccagg
aaaatactatttgtggtcaccgaaactcttctcgaagactccatgtgtcgacagttcatg
gcccaccacgccctgcaccaggtgatcgaggacagccgggactcggtggtgctggtcttc
ctggaggacgtgcaggactacaagttgtcccgctgtctgctcctgcgcaggggcatgctt
cgtccaaattgcctcctcaactggcccctgcagagggagagggtgcccgccttccaccag
aggctccgcatcgccctgggcaccaccaaccgagtgcagtaa

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