Oncorhynchus mykiss (rainbow trout): 110498372
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Entry
110498372 CDS
T07259
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110498372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110498372
03021 Transcription machinery [BR:
omy03021
]
110498372
03036 Chromosome and associated proteins [BR:
omy03036
]
110498372
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
ARID
110498372
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110498372
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110498372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
110498372
NCBI-ProteinID:
XP_036810869
LinkDB
All DBs
Position
19:48251112..48582548
Genome browser
AA seq
2437 aa
AA seq
DB search
MAAQVASAPTLTNNKNNTLSGNLGQEIHSGKSGGGNISRSGEMLGAVDGTNTMNNVDHHH
RNELNMVNSTYSPNNNSDTPEKDSGNNVTSSDSTTSPGGMETGLLENHKLKNVGSGDPPQ
HLTPPQQQSQFNPFPQHQQRQIQSNNNNNSQATRGESENHHHGGKEGVSGSQSEQQMLNK
GDGDHTCKPGERMGARYEHSNLGPTTNNIISQPQSAGGNSEFNNYYGTSRVGPCYDQHGG
QQQSTGMGMMHSSGPNNMDPVHNSQEGYHNSHYNHYSGYRQGYCGAGYGMMAPSRQGSNM
LIGPGSNTPAGHVKAAMGAAACGSGGSVGGFQRFPGQSQHPTGATPTLNQLLTSPSPMMR
GYGSGYQDYNSTSAQQQDGIGLGKDMTSQYGSTTHGWPGQQRNHPSMSPGNGGPGISRPQ
VASKDFMAMKRSQLYGMGNNPYSQQQQGGPYPNQPYGSPTPHRYPMGMQGRGQVGIGGMQ
YPQQQQGPPQYGQQGIGGYSQQQQQQQGTTPGPYFSPPQQNPTAPPSQPPYLLPHVPPQQ
EAPRESYGGRSQQQAPGNSGKANQEDMGLISQDRPSSLPDLSGSIDDLPTGTEAGHSSAI
SATGSTSSQGEQSNPAQSPFSPHASPHLSGQGSGPSSSPVGSPVGSNQSRSGSGPISPVS
GPTTAPGSQMAPQTPGNMLDVPHPPLTQSPMPQERGFMSNMQRNQSGSQFAPPPQSGPSM
SPHPSPGPGGQMYPGMGPYPHGGSSGPYGPQGSQANQYGPQGNYPRPPNYGGTPSANYSS
PGPGSGMTNSQGMNASSPMHGQGPGQPMGRSPGVGSRPYPNMAPSSPSMPQPAGPGMGPP
SLGNVNRKAQEAAAAVMQAAANSVQGRQGSYPGPGMNLMGTTGSGAPYNQSPGNNSGMGT
PQGPPYNMPPSGAVGMAVSGMMNPDGKQKTGGKEENMPTNEPPKLKDGHSVSQCVSQPTT
PGAMLVPSPVSPSPASLSSYHGDDSDSISSPVWPKTPSSPKLNSSTMTNERITRLYDMGG
EPERRGWVDRYLSFMEERGTPVPHLPAVGKKPLDLCRLYMAVREIGGLALVNKNKKWREL
STNLSVGTSSSSASCLKKQYIQYLFAYECKVERGEDQPADSNTGTGGENRKQAKVQPPSP
ANSGSVQGPQTPQSSGSSSMAEMSGDLKPPTPATTPQGQVTPIPASRSSVVSVQDPFSEV
SDPAFQKRNSLPLVGSGGVYQQGVNMPPNMMMRMQYEKDPFVGMRKVAGGEPYMPGQMTS
GGIQDMYGRSTSGMGQRSPYPYGPGYDRRPDHLMGMEGSMGPPGNQSNMGPSNSEGSIYS
PNRYPSQQRHEGYAQQYPGMSYGMHPSGMYPQQQRPMESMYGPPAKRHEGEMYGPPAKRH
EGEMYGPPAKRHEGEMYGSPAKRHEGEMYGPPAKRHEGEMYGSPAKRHEGEMYGPPAKRH
EGEMYGPPAKRHEGEMYGPPAKRHEGEMYGPPAKRHEGEMYGPPAKRHEGEMYGPPAKRH
EGEMYAMQYRGQQPDMYNHYTTGYSGPERRPMQGQFPYPSPYSRERMQASGQGQHPMGPQ
MMSGGPPSNNGVEGPQGPNMWPSRTDMGYPYPNRQGAPSQVPPYGPMGRGDDLEGRPIQD
GQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTSPSMANHLPRAPSPGSFQRSMEARMSP
NKAVFMGSMKMPGKPGMPMPGQGNGHPGQVAPNLLRDLNYPLGSVEATMPVFKPRRKITS
KDTGTPEAWRVMMSLKSGLLGESTWALDTINILLYDDRSVASFTLTQLPGFLELIVEYFR
RCVMEIFGILEEYEIGTIGQNTLLGAEACDQGEELTSEAEMDCEASPPEPEQEQEVERGK
TEKGEVEKGEEKSVDITEKMTEEGMSPPSATEPAPEGTKEESEAEIKVKKEEGEKEEEGE
KEEEGEKEEEREKEKWKENEESEKPTESKEASAESKEISPSQAPSEHEPRPQQASKYDKF
PVKILHKEDLIEDMTEQLGHVTEFTSGLLHWQAGGGDSTAHIQAHFERRGEHPDRMDGER
EECASLNKEPDTEGGKQTEMGITATIDDILCARLGALSEGHPTHSAPTYPFRLHQGGGHQ
HITLLEDEPRCLDEAPLSTSSPWQDSLAKRCLCVSNIIRSLSFIPGNDSDMSRHPGLVLI
LGRLLLLHHQHPERKRTPPSYQREDVQERGLACSKDEWWWNCLATLRENTLVTLANISGQ
LDLSLYPETICLPILNGLLHWMVCPSAEAQDPFPSGTPHSPLTPQRLVLECLCKLSIQDN
NVDLLLATPPFSRQEKLYATLVRYVGQRKNQVYREMAVATLSNLAQGDSTAARAIAIQNN
SVGNLMGFLEDGVSMAQHQQNPHSMLHMAHHPPMEPPSINMMCRAAKALLAMAKVEENRP
EFVLYEGRILDISISSVLNQGVTSIICEVLFQFVKKL
NT seq
7314 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagcaccgacattaactaataataagaataacacattgtct
ggcaatttgggtcaagagatacattcggggaaatcaggaggaggaaatatatcgagatct
ggagaaatgcttggagctgttgatgggactaacacaatgaataatgttgatcaccaccac
cgaaatgagctcaacatggtcaattcaacttattctccgaataacaattctgacacaccg
gagaaggatagtggaaataacgtcacttcgtcagattcgacgacctctccgggggggatg
gaaaccgggttgctagagaaccataaactgaaaaatgttgggagcggagatccccctcag
cacctcacaccgccgcaacagcagtcacaatttaacccgtttcctcagcatcagcagcgc
cagatacaaagtaacaacaacaacaacagccaagccacaaggggagagagtgagaatcac
catcacggagggaaggagggtgtttcgggtagccagtcagagcagcagatgctaaataaa
ggtgatggggatcatacctgtaaaccaggggagcggatgggtgctaggtatgaacattct
aacttgggaccaacgaccaacaacatcatcagccagccccagagcgcgggaggaaacagc
gagtttaataactactatggcacttccagagtagggccctgctatgatcaacatggcgga
caacaacaaagcacagggatggggatgatgcactcttcgggacccaacaacatggaccca
gtgcacaactcccaagaagggtaccacaacagccactacaaccactattctggctaccgg
cagggctactgtggcgcgggctatggcatgatggccccgtccagacagggcagtaacatg
ctgattggccctggcagcaacactccagctggccatgtcaaggctgctatgggagctgct
gcctgcggttctggtggaagtgttgggggctttcagagattcccaggacagagtcagcat
cctaccggggccaccccgacactaaaccaattactgacatctccaagtccaatgatgcga
ggttatggaagtggctatcaagactataacagtacatctgcacaacaacaagatggcatc
ggcctgggcaaagacatgacttctcagtatggctccacaacccatggctggccagggcaa
cagagaaatcacccgtccatgagtcctggaaacggagggccaggtatcagcagaccacag
gtggcctctaaggacttcatggctatgaagcgctcccagctctatgggatgggcaacaac
ccctactctcagcagcagcagggtgggccctatcccaaccagccatacggatcgcccact
ccacaccgatacccaatggggatgcaggggaggggccaggtgggcattggcgggatgcag
taccctcaacagcagcagggtcccccccagtatggccagcagggtataggaggatacagc
cagcagcagcagcaacagcagggaacgaccccgggaccctacttcagtcccccccagcag
aaccctaccgcccccccttcacagcccccctacctgctaccccacgtcccacctcagcag
gaggctcctcgggagagttacggaggcaggagtcagcagcaagccccagggaattctggg
aaggccaaccaagaggacatgggtctgatctcgcaggaccgcccctccagccttccagac
ctgtctggctccatagatgacctccctacaggtacagaggctgggcacagttcagccatc
agtgctacaggctccaccagtagccagggggagcagagtaacccagcccagtcacccttc
tcaccccacgcgtcaccccacctgtctggtcaaggcagcggcccatcgtcctctcctgtt
gggtcccctgtgggctccaaccaatcacgctccggctctggccccatctcccctgtcagc
ggcccaaccacagcaccaggttcccagatggccccccagactcctggcaacatgttggat
gttccccacccccccttgacccagtcccccatgcctcaggaaaggggctttatgtccaac
atgcagagaaaccagtctggctcccagtttgcaccaccacctcagtcggggccctccatg
tcccctcacccctctcctggtcctgggggacagatgtacccagggatggggccctacccc
catggtggctccagtggcccctatggaccccagggatcccaggcaaaccagtatggaccc
caaggaaactacccacgtccacccaactatggcgggacccccagtgccaactacagcagc
cccgggccaggctctggcatgaccaacagccagggtatgaatgccagcagccccatgcac
ggccagggtcccgggcagcctatgggccgcagtcctggtgtgggcagccgcccctacccc
aacatggcccccagctcccccagtatgccccagccagccggccctgggatgggccctcct
tcactgggcaatgtcaaccgaaaggcccaggaggcagccgccgctgtcatgcaggccgca
gctaactctgtacagggcagacagggcagctacccaggccctggcatgaacctgatggga
acaacaggatctggagccccctacaaccagtcaccaggcaacaactcaggcatgggcaca
ccacagggtccgccctacaacatgccaccctcaggggccgtggggatggctgtgagtggg
atgatgaatcctgatgggaagcagaaaacaggtggcaaggaggagaacatgcccaccaat
gaacctccaaaactaaaggatgggcacagtgtatcccagtgtgtctcccagcccaccacc
cctggtgccatgcttgtcccctctcccgtgtcccccagcccagccagcctgtcctcctac
catggggatgacagtgacagcatcagcagccccgtctggccaaagactccctccagccct
aagctcaactcgtccaccatgactaacgaacgaatcacgcgcctgtatgatatgggtggg
gagccggagaggcgtggctgggtggaccggtatctgtccttcatggaggagaggggtaca
cctgtcccccaccttcccgctgtgggcaagaagcccctggacctctgcagactctacatg
gctgtcagggagatagggggcctagctctggtgaacaagaacaagaagtggcgtgagctg
tccaccaatctgagtgttggtacctccagtagctccgccagctgtctgaagaagcagtac
atccagtacctgtttgcctatgagtgtaaggtggagcgaggagaggaccagccggccgac
agcaacactgggactgggggggaaaacaggaagcaggccaaggtgcagccgccctctcct
gctaactcagggtccgttcagggcccccagaccccacagtcatcaggcagcagctccatg
gcagagatgtcaggtgacctgaagcctcccaccccagccaccaccccccagggacaggtc
acccccatcccagccagcaggagcagtgttgtgagtgtgcaggacccgttctctgaggtg
agcgacccggccttccagaaacgtaactctctccccctggtgggctctgggggtgtgtac
cagcagggggtcaacatgccccctaacatgatgatgaggatgcagtacgagaaggacccc
ttcgttggcatgagaaaggtggcaggaggggagccctacatgccaggccagatgaccagt
ggtggcatacaggatatgtatggcaggtctacatcaggcatgggccagcgctccccctac
ccatatggaccaggctacgacaggagaccagaccatctgatggggatggaggggagcatg
ggcccccccgggaaccagagcaacatgggaccttccaacagcgagggcagcatttactct
cccaacagatacccctcccagcagagacacgaaggctacgcgcagcagtaccctggcatg
tcatatggaatgcacccctcagggatgtaccctcaacaacagcgccccatggagagcatg
tacggccccccagcaaagagacatgagggggagatgtacggccccccagcaaagagacat
gagggggagatgtacggccccccagcaaagagacatgagggggagatgtacgggtcccca
gcaaagagacatgagggggagatgtacggccccccagcaaagagacatgagggggagatg
tacgggtccccagcaaagagacatgagggggagatgtacggccccccagcaaagagacat
gagggggagatgtacggccccccagcaaagagacatgagggggaaatgtacggcccccca
gcaaagagacatgagggggagatgtacggccccccagcaaagagacatgagggggagatg
tacggccctccagcaaagagacatgagggggagatgtatggccccccagcaaagagacat
gagggggagatgtatgccatgcagtataggggccagcagcctgacatgtacaaccactac
accactggttactctggacctgagaggaggcccatgcagggccagttcccctacccttcc
ccctatagccgagagcgcatgcaggcctctggccaggggcagcaccccatgggcccccag
atgatgtccggggggccaccctctaacaacggagtggaaggaccccaggggcccaacatg
tggccctccaggacagacatgggttatccctaccccaacagacagggggcaccctcccag
gtaccgccatatggtcctatggggagaggagatgatttggagggccgacccatccaggat
ggtcagtggcttgggcacggaggccatcgccagtcctcctacatgtcaggtggtatgacc
cccatgtcctcccgccagcccccctctgcataccagacctccccctccatggccaaccac
ctgccccgagcccccagccccggctccttccaacgctccatggaggcacgcatgtccccc
aacaaagctgtctttatgggctccatgaagatgccaggcaaaccagggatgcccatgcca
gggcagggtaatgggcacccaggccaagtcgcacctaacctgctgagagatctcaactac
cctctaggatctgtagaggccaccatgcccgttttcaagccacgtcgcaaaattacctca
aaagacactggaaccccagaggcgtggcgagtgatgatgtctctgaagtcaggtctgctg
ggtgagagtacgtgggccctggacaccatcaacattctgctgtatgatgacagatctgtg
gcctccttcaccctcacacagttgcctggcttcctggagctgatagtggagtacttcaga
cgctgtgtgatggagatctttggcatcctggaggagtatgagatagggaccatcggccag
aataccctccttggggctgaagcctgtgaccagggggaggagctgacctctgaagctgag
atggactgtgaggccagcccaccagagcctgagcaggagcaggaggtggagagggggaag
acggagaagggggaagtagaaaagggggaagagaaatctgttgacatcacagagaaaatg
acagaggaagggatgtcaccccccagtgcaacggaaccagcccctgagggaacgaaggag
gaatctgaagccgagattaaggtaaagaaggaagagggggagaaagaagaggagggggag
aaagaagaggagggggagaaagaagaggagcgggagaaagaaaagtggaaagagaatgag
gagagtgaaaagccaaccgagagtaaggaagcctcagctgaaagtaaggaaatctctcct
tctcaggctccttcagagcacgagccaaggccacaacaggccagcaagtacgacaaattc
cccgtcaagatcctgcacaaagaggacctgattgaggacatgacagagcagctgggtcac
gtgacagagttcactagcggactgctccactggcaggcaggcgggggtgattccaccgcc
cacatccaggcccactttgagcgcaggggagagcaccctgacaggatggatggagagaga
gaggaatgtgccagtctcaataaagaaccggacacagaggggggaaagcagacagagatg
ggtatcactgccaccatcgatgatatactgtgtgcccggttaggggctttgtcagagggc
caccctacccactctgcccccacctaccccttcaggctgcaccagggagggggccaccag
cacatcaccctgctagaggacgagccccgctgtctggacgaggctcccctctccacgtcc
tccccctggcaggactccctggccaaacgctgcctctgtgtgtccaacatcatccgcagc
ctctccttcatccctgggaacgactcagacatgtcccgtcacccaggcctggtgctgatc
ctgggcagactactgctgctccatcaccagcacccagagaggaagaggacgccccctagc
taccagagagaggatgtgcaggagcggggcctggcctgcagtaaggatgagtggtggtgg
aactgtctcgctacactcagggagaacaccttggtcactctggctaacatctctggccag
ctggacctgtccctctacccagagaccatctgcctgcccatcctgaacggcctgctccac
tggatggtgtgtccctctgccgaggcccaggaccccttcccctcaggcaccccccactcg
cccctcaccccccagagactggtgctggagtgcctttgcaagctgagcattcaggacaac
aacgtggacctgctgctggccacgccacccttcagccgccaggagaagctgtacgctacc
ctggtgcgttacgtgggccagcgtaagaaccaggtgtaccgcgagatggccgtggccacc
ctatccaacctggctcaaggagactctacggcagcacgcgccatcgccatacagaataat
agtgtgggtaacctgatgggcttcctggaggatggagtgagcatggcccagcaccagcag
aacccccacagcatgctgcacatggcccaccacccccccatggagccccccagcattaac
atgatgtgtcgggctgccaaagctctgctggctatggccaaggtggaggagaacaggcca
gagtttgtcctgtatgagggacgaatcctggacatctccatatcctctgtgctcaaccag
ggggtgaccagcatcatatgtgaagtactttttcagtttgtaaaaaaattatga
DBGET
integrated database retrieval system
