Oncorhynchus mykiss (rainbow trout): 110505113
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Entry
110505113 CDS
T07259
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110505113
Membrane trafficking [BR:
omy04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
110505113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
V-set
LRRNT
LRR_9
Ig_6
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
110505113
NCBI-ProteinID:
XP_021439771
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Position
31:complement(36529308..36935859)
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AA seq
614 aa
AA seq
DB search
MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYMFQDLNNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLHAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHGLNLTTLFITNTNLSTFPYQAIKHLHYLTLLNLSFNRITFIEGRM
LSELVHLRELHLVGAQLSTVEPYAFQGLRWLKVLNVSHNRLDTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQRRQSIYFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQPVRLHCSVEGTPRPVVSWLSPRRRLLTNKSHGRVMVHNNGTLEIKA
AEVQDGGVYLCMATNTAGNDSLMTSLAVKSLGSLYANRTQYYTDPSNATTNGTINVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSLDGGA
EGEAGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagtaaagtcatgctgcacacggccctctcatgctggcaaccgttc
ctgggactggctcttgtggccgtcttcgtgggttctgccttgggatgtcccgcccgctgc
gactgctcggcccagagcaagtcggtcctgtgccaccgcaaacgcctacctagcatccca
gacggtatccccatcgagaccaggatcctggacctgagcaagaataagctgcaggccgtc
aacccggatgactttgccccctatcctggtctagaggatttggacctcagtgggaacatt
atcagctatgtggagccgggggccttcaaccctctgtacagcatgcactcccttagtctc
aaaagcaatcgtattaagctcattcctatgggtgtcttcacaggcctgtccaacctcacc
cggttggatgtcagcgacaacaatattgtcatcctgctggactacatgttccaggacttg
aacaatctgaagttcctggaggtgggtgacaatgacctagtgtacatctcccaccgggca
ttcagtggactgcttagcctagagactctaaccctggagagatgcaatctgacagtggtg
cctactgaggccctgtcccacctgcacaacctggtaagacttcacctgcgatacctcagc
atcagcaccttgcatgcctactccttcaagaagctgttccgattgcgccacctggagatt
gacagctggacctcgctggacagtgtgccggccaacacgctgcatggcctcaatttgacc
acgcttttcatcaccaacaccaacctgtccaccttcccataccaggcaatcaagcacctg
cactacctgacgctcctcaacctgtccttcaatcgcatcacattcatcgaaggcaggatg
ctgtcggagttggtgcacctaagagaactgcatctggtcggggctcagttgtcgaccgtt
gaaccgtacgcatttcagggcctccggtggctcaaggttctcaacgtctcccacaaccgt
ttggacaccctggagaagggtgtcttccaagctcctgaggctctggaggtactcttgatc
gatgacaaccccctggtttgcgactgccgcctcatgtggatcctgcagaggaggcagtcc
atctactttggtgactcgcagccggagtgcagtacccccgagggcatccgcggcaggcct
ttcagggagttcaaggagaccctgctctcctactatgtgacgtgcaccaagcccaaaata
cgggagaacaagacgcaaacaattgccgtagacgaaggtcagccagtgagactgcactgt
agtgttgaggggacccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagccacggtagagtcatggtccacaacaatgggacgctggagatcaaggcg
gccgaggtgcaggacggcggggtgtacctttgcatggcaaccaacactgcgggtaacgac
tcattaatgacctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaatgccactaccaatgggactatcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggttgtttcacattcctgggggtggtt
ttgttctgcttcctcctcctgttcgtttggagtcggggcaaagggaagcataaaaacaac
atagatattgaatacgtacctcggtccaagtctaatggcacctctttagatggaggagca
gagggggaagctggaccccgtcgctttaacatgaaaatgatctaa
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