Oncorhynchus mykiss (rainbow trout): 110508755
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Entry
110508755 CDS
T07259
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110508755 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110508755 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
F420_ligase
Death
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
110508755
NCBI-ProteinID:
XP_021445209
Ensembl:
ENSOMYG00000027658
LinkDB
All DBs
Position
28:22941732..23022726
Genome browser
AA seq
1594 aa
AA seq
DB search
MGWFIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADYT
GGPNCERCLDNYYRDTSGTRCLPCSCNPVGSLATQCDKTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCESAEGYSIDTVSSTFNRDDEQWTGQQRDSSSVSVQWSTGGEISLISDDYF
PMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
AKKGPGSPARWVEKCTCPQGYVGQHCESCALRYRRSRPDLGPFSSCDSCSCNGHSDTCNP
DTGMCDCLHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGENGQARVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLATNPNDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAENLIGLAREELDKA
KDAISKLDFKAPSISGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKLLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggcactgtgcacagacgagttcagcgacatctcacccctg
actggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgtaagtgcaatggccatgcgagtgagtgt
gcgaaaaataacggtttcggcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctctaccgtgccaccggccacggaggacactgccgcaactgtgccgactacaca
ggcgggcccaactgtgagcgctgcctggacaactactacagagacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggctactcagtgtgacaaaacagga
cgctgcagctgtaaacccggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacgttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccgcagaaccctcagggttgcactccg
tgcttctgcttccagcattcctctgtctgtgagagcgctgaaggctacagcattgacaca
gtctcctccaccttcaaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccagtggtccactggtggggagatctccctcatctccgatgactacttc
ccaatgtactttgtggctccagagcggttcctgggcaatcagctgctgagctacggccag
aacctcaccctgaacttccgggtggacaggagagacacacgtctctcagctgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cccggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactatccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagcttatcacg
gcgaagaaaggtcccgggagcccagctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacagcactgtgagagctgcgccctgagatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcagctgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgcctacacaacacagctgggctcagttgtgagagatgtaaa
gacggttactatggagactccactgtggggagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagacaaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgacgacggtttcttcggagacccc
ctgggggagaacggacaggcgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgttgcaaagagggcttctatggaaacccgctggccacc
aaccccaacgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagtgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcgctgtgaacgctgtgaggtcaacttcttcggattc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacagcccagtgt
aaagaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccacgtcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagaaaaatccatcatggacctactggacgaggctcagaccagcaaagatgtg
gacaaaggcctgctggagcgcctggggaaactgaacagcacactgaccactcagtggaat
cgtttgcagaacatcaggaacaccgtggacaacactggaacccaagccgacaaggcccgc
aaccgggtccgagacgccgagaacctgatcggcctcgcccgcgaggaactggataaggcc
aaggatgccatcagcaaactggacttcaaagcaccctccatcagtggagatcccaacaac
atgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcggat
caaattgagaagatcgcaaaagatgccaatgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaattactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
ctggacaagctgattgacaagacagagaaagagtacaacgacttgagggatgatctgcga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagactttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcattgcggccaatgagaagaccaagcaggctgagggggcactaggcaacgca
gctgcagatgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcggacaat
gcgaaggaagcggaggacaacgcccgcaaagccaagagtgctgtcaggactgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaggggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaatgatgtggccaagagccaggaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaatgacatcaagaacact
ttacctgacggctgcttcaacaccccatccctagagcgaccttaa
DBGET
integrated database retrieval system