KEGG   Oncorhynchus mykiss (rainbow trout): 110508755
Entry
110508755         CDS       T07259                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110508755 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110508755 (lamc1)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Alanine_zipper F420_ligase Death DNApol_Exo
Other DBs
NCBI-GeneID: 110508755
NCBI-ProteinID: XP_021445209
Ensembl: ENSOMYG00000027658
LinkDB
Position
28:22941732..23022726
AA seq 1594 aa
MGWFIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADYT
GGPNCERCLDNYYRDTSGTRCLPCSCNPVGSLATQCDKTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCESAEGYSIDTVSSTFNRDDEQWTGQQRDSSSVSVQWSTGGEISLISDDYF
PMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
AKKGPGSPARWVEKCTCPQGYVGQHCESCALRYRRSRPDLGPFSSCDSCSCNGHSDTCNP
DTGMCDCLHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGENGQARVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLATNPNDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSTSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAENLIGLAREELDKA
KDAISKLDFKAPSISGDPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKLLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgggttggtttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggcactgtgcacagacgagttcagcgacatctcacccctg
actggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgtaagtgcaatggccatgcgagtgagtgt
gcgaaaaataacggtttcggcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctctaccgtgccaccggccacggaggacactgccgcaactgtgccgactacaca
ggcgggcccaactgtgagcgctgcctggacaactactacagagacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggctactcagtgtgacaaaacagga
cgctgcagctgtaaacccggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacgttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccgcagaaccctcagggttgcactccg
tgcttctgcttccagcattcctctgtctgtgagagcgctgaaggctacagcattgacaca
gtctcctccaccttcaaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccagtggtccactggtggggagatctccctcatctccgatgactacttc
ccaatgtactttgtggctccagagcggttcctgggcaatcagctgctgagctacggccag
aacctcaccctgaacttccgggtggacaggagagacacacgtctctcagctgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cccggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactatccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagcttatcacg
gcgaagaaaggtcccgggagcccagctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacagcactgtgagagctgcgccctgagatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcagctgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgcctacacaacacagctgggctcagttgtgagagatgtaaa
gacggttactatggagactccactgtggggagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagacaaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgacgacggtttcttcggagacccc
ctgggggagaacggacaggcgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgttgcaaagagggcttctatggaaacccgctggccacc
aaccccaacgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagtgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcgctgtgaacgctgtgaggtcaacttcttcggattc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacagcccagtgt
aaagaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccacgtcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagaaaaatccatcatggacctactggacgaggctcagaccagcaaagatgtg
gacaaaggcctgctggagcgcctggggaaactgaacagcacactgaccactcagtggaat
cgtttgcagaacatcaggaacaccgtggacaacactggaacccaagccgacaaggcccgc
aaccgggtccgagacgccgagaacctgatcggcctcgcccgcgaggaactggataaggcc
aaggatgccatcagcaaactggacttcaaagcaccctccatcagtggagatcccaacaac
atgacccttctggcagaggaggctcgcaatctggccgacaaacataaaatggacgcggat
caaattgagaagatcgcaaaagatgccaatgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaattactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
ctggacaagctgattgacaagacagagaaagagtacaacgacttgagggatgatctgcga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagactttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcattgcggccaatgagaagaccaagcaggctgagggggcactaggcaacgca
gctgcagatgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcggacaat
gcgaaggaagcggaggacaacgcccgcaaagccaagagtgctgtcaggactgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaggggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaatgatgtggccaagagccaggaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaatgacatcaagaacact
ttacctgacggctgcttcaacaccccatccctagagcgaccttaa

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