Oncorhynchus mykiss (rainbow trout): 110522831
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Entry
110522831 CDS
T07259
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110522831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110522831
Transporters [BR:
omy02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
110522831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Pentapeptide_4
Pentapeptide_3
MFS_2
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
110522831
NCBI-ProteinID:
XP_036832976
Ensembl:
ENSOMYG00000003632
LinkDB
All DBs
Position
5:complement(23491051..23556681)
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AA seq
740 aa
AA seq
DB search
MDESYNNRMSLVKGAKDIAKEAKRHAAKKVSKIVNRATEEYSSQRNYSQFQNEDKDNDYT
FYTQPDSNGHFPCSRTANDEDGEHYASDATEGHDDEDEIYEGEYQGVPAYTDRKPRDGQD
SLGQPVSDSLRDRKELELERQADEEELAQQYELIMQECGHGRFQWQLFFVLGMALMSDGV
EVFVVGFVLPSAETDMCVPNSGAGWLGSIVYLGMMVGAFFWGGLSDKVGRKQCLLIAMSV
NGFFSFLSSFVQGYGMFLFCRMFSGFGIGGVVPIVFPYFAEFLAREKRGEHLSWLCMFWM
IGGIYASAMAWLIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFF
LEMGKHDEAWMVLKQIHDTNMRARGEPEKVFTVNRIKLPTHLDELVEMQSDSSNPVGQVL
FMIRTELRGIWLTFMSCFNYPVKDNTIKLAFVWFTLSFGYYGLSVWFPDVIHHLQSDEYA
SRVKTHNNEHTEDFTFNFTLENQIHTNGVFVNDRFISMKLKSVTFIDSTFQNCYFDDVST
VGSLFKNCTFVEAFFYNTDIDDSKLVGSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVNF
VGTLAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLS
ISAWNSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKTIPILLASAV
LVGGGLVGLRLPDTRGHVLM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcgtacaacaacaggatgtcgctggtgaagggcgccaaggacatcgccaaa
gaggccaaacgccacgccgccaagaaggtcagcaagattgtgaaccgcgccacggaagag
tactcctcccaacgcaactacagccagttccagaacgaggacaaagacaatgactacacg
ttctacacacagcctgacagcaatggccactttccctgcagccgcaccgccaacgacgaa
gatggcgaacactacgccagtgacgccacagagggtcacgatgatgaagatgagatctac
gagggggagtaccagggggtgcctgcttacactgacaggaagcccagggatgggcaggat
tctctgggtcaacctgtctcagacagcctgagggaccgtaaggagctggagctggagagg
caggcggacgaggaggagctggcccagcagtatgagctgatcatgcaggagtgtggccac
ggcaggttccagtggcagttgttcttcgtgctgggcatggcgctgatgtcagacggtgtt
gaggtgtttgtggtgggtttcgtcctgcccagcgccgagactgacatgtgtgttcccaac
tctggagctgggtggctaggtagcatagtgtacctggggatgatggtgggggcgttcttc
tgggggggtctgtcagacaaggtgggccgtaaacagtgcctgctcatcgctatgtctgtc
aacggcttcttctccttcctctcctcctttgtccaggggtacggcatgttcctcttctgc
cgcatgttttcgggcttcgggattggtggggtggtccccatcgtgttcccctactttgcg
gagttcctggcgagggagaagagaggagagcacctgagctggctctgcatgttctggatg
ataggagggatctatgcctcggcaatggcctggctcatcataccacactacggatggagt
ttcagtatgggctccgcctaccagttccacagttggagagtgtttgtggtggtgtgtgct
ctaccctgtgtgtgtgctgtcgtagcactcaccttcatgcccgagagcccacgattcttc
ctagagatgggtaaacatgacgaggcatggatggtgctgaaacagatccatgacaccaac
atgagggcccgcggagaaccagagaaagtcttcaccgtgaacagaataaagctccctacg
catctggatgaattggtagagatgcagtcagactcatccaaccctgttggccaagtcctc
ttcatgatcaggactgaactcagagggatctggttaacgttcatgagctgtttcaattac
ccagtgaaagacaacaccatcaaactggccttcgtgtggttcacactgtcttttgggtac
tatggcctatctgtgtggttccctgatgtcatccatcacctgcagtctgatgagtatgcc
tctagagtgaagactcacaacaacgaacatacagaagacttcacctttaacttcaccctg
gagaaccagatacacaccaacggagtattcgtcaacgacaggttcatcagtatgaagttg
aagtccgtcacctttatagactctacgtttcagaactgttactttgacgacgtgtcaaca
gtgggctcattattcaagaactgcaccttcgtagaagccttcttttataacacagatatt
gacgattctaagctggtggggtcgagggtgatcaacagttcgttccaccacaacaagacg
ggctgtcagatgacctttgatgatgactacagtgcctactgggtctactttgtcaacttc
gtgggcacgctcgccgttttgcccggcaacatagtctccgcccttctcatggacaagata
gggcgcctgagcatgctggggggctccatggtgctgtcaggcatcagttgtttctttctg
tggtttgggacaagtgagtctatgatgatcttcatgctgtgtctctataacggcctcagt
atatcagcctggaactccctggatgttgttactgctgagctctacccaactgacaggagg
ggtacaggttttgggttctgtaatgccatgtgtaagctggcagcggtgttggggaacctg
atcttcggttctctggttggcatcacaaagaccatccccatcctgctggcgtcggctgta
ctagtgggaggaggcctggtgggactacgactgcctgacacacgcggccacgtcttgatg
tag
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