Oncorhynchus mykiss (rainbow trout): 110525298
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Entry
110525298 CDS
T07259
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110525298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110525298
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110525298
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110525298
HMT complexes
COMPASS/SET1 complex
110525298
COMPASS/SET1 complex (yeast)
110525298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
BUD22
DUF6172
EspG
DUF3106
Doppel
Motif
Other DBs
NCBI-GeneID:
110525298
NCBI-ProteinID:
XP_036837632
LinkDB
All DBs
Position
6:23925846..23941878
Genome browser
AA seq
1621 aa
AA seq
DB search
MEINHQVNHGEKHPQHWRSCKLIVDPALKNGFYKVYRYDGHHFNMPDLGAFPVDTVRDPR
ICRLWTKFRDTDLLVPKFKIDEYYVGPPKEVTFARLNDNVREGFLTDMCIKYGQIEEVEI
LYNPKNKKHLGIAKVIFDTVKAAKDTVEHLHDTSVMGNIIHVELDPKGKNRMRYFHLLVS
GLYTPSTLPLGSDEHTLQRLTERLQDSKPLQKLTDGSSSLTRSISSPTSVATPLSLDTAY
SSIWQDTPGSFGQTPLSQGTPHTPCLSGTPLSQDSCYSSQHTTPVHQVTQGEHSSYGAHR
RLRRDVCYRQPGRPYMRSHHQSSELSSLLKHLQPHRPLQPQTQVASGSYKSSVFWYQNRL
PSADDNPATEPPLSLPEQESWRVPSLPPASEAFPLSNSSASATSMNVVPLRERPQSPPSG
PDAGLIEPPPSPPNNSPGRLIPEAESHSLDSRIEMLLSKTQSSCLPLHGERGLDAEVHSQ
DSPVSPFSPVSMYSPESDHTPARSGSPVNCTHPTTSDGLEDVSPTSLPEWEGDESLPGMP
SLTWTSQPPWPPGTLSLTQRERIYPYPLNTLHTVHMDKVNGLPGCGSVPVSFTGQPWPLP
PFMPTFNPSVPPPGYLPLQEDPHKATVEKVLAVITEELKSIVKRDINRKMVEGVAFRAFD
EWWDGQEQKAKIAVSLVNAREGRVEVRAKPRDSLRQNIGPRGATNLPSFKVKKKESDEST
ASEDPKRKCPYTPVNDAHESAELESNITNHTLDRSPKTGTIPAVRRRHARPLELDSEGEE
ESREKEGEPTRDKEEDTVEADKVPQRQQRDENDDSEQKEEEVDEDEDDDEDDDEDVLLNK
STSINLLHILKCTLLFSHLPEVARVSLSEVESYSSEDSEYLSESDSSDSSFEESEDFSDY
DSSSDQETEEEEETDGDADEVNREVECVVLSSDEEEMDLEPPATPSAPLTPGTELDLLDG
SEPVLRDQPWEEKHSVCLTRDVFGRTSCTSRPDPGMELLSSEHHHDLQAPSPIGLPGRSV
VEPDFAVEIDSPEWSVESPDNVENLRPLTPTGSLGDSDSDLLFKSKPTPPAVEEVELPHT
PGRGAEALLESEEDSMDHLLSFSRTDSEPLSQSRPTHPPALASYPTYEDMPKTPGTDERG
LWNPLTPWRVPVTPGRDSGLTEGGPGFSPTPCNPFPLPSLCTGLYIRTPQTPGRDFIPTK
RTHRNTTVMLASSQRTNGAPLSRDEMLTDSPVLASSPSSLSESSAETSGHGYVWLNPNPG
SQRKLPLQGLENWSGLADVENQREMEECSWRRVQPRMRRKMRRKMRRWQRMRSVQRAMPS
VFSASPCRRSRSEEMTVLHSVWKEGLDEEDSKLLQVTYDRLLQQDNGFSWLSDTLWVPHP
HILYYRAKRKELNDWMWDHVTGSARSEGFYKISKNDKIKYLNSTCLNTDQPSADTQGVGL
SGQPHPSLRSGSEFRSEQRRLLSSFSCDSDLLRFNQLKFRKKRIRFCRSHIHDWGLFALE
PIAADEMVIEYVGQCIRQVIADMREKRYEDEGIGSSYLFRVDQDTIIDATKYGNLARFIN
HSCNPNCYAKIITVKSQKKIVIYSRQSISVNEEITYDYKFPIEDEKIPCLCGAENCQGSL
N
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaccatcaggtaaatcacggagaaaaacatcctcagcactggaggagctgc
aagttgatcgtagaccctgcgttgaagaatgggttttataaagtgtatcgttacgatggg
catcatttcaacatgccagacttaggggcatttcctgtggatactgtccgggatcccaga
atctgtcgtctttggaccaaattcagagacactgacctgctggtccccaaatttaagatt
gatgaatactatgtcggcccacccaaggaagtgacatttgccaggttaaatgacaacgta
agggagggtttcttgactgacatgtgcataaagtacggacagattgaggaagtggaaatc
ttgtataatcctaaaaacaagaagcatttaggaattgctaaagtcatcttcgacacagtc
aaggctgcaaaggacactgtggaacaccttcatgacacctctgtcatggggaacattatc
cacgtggaacttgatccaaagggtaaaaacagaatgcggtacttccatcttcttgttagt
ggactctacaccccttcgacattgccactgggcagtgatgagcacaccctccaacgccta
actgagagattgcaggacagcaaacctctgcaaaaactgactgatgggagttcatcattg
acaaggtctatttccagtcccaccagcgtggctacacctctctccctagacacagcctac
tccagtatctggcaggacacaccgggcagctttgggcagacacccctctctcagggcacc
ccacataccccctgcctgtctgggacccccctctctcaggactcttgctactctagccag
cacaccaccccagtccaccaagtcactcagggtgaacactcctcatacggtgctcacaga
cgcttgaggcgcgatgtctgctatcgtcaaccagggagaccttatatgagatcccaccat
cagagctcagagctgagctctctcctcaaacacctccaacctcaccgtcctctccagccc
caaacccaggttgctagcggcagctacaaatcttccgtcttctggtatcagaaccgcctg
ccctctgctgatgataaccctgccacagagcctcccctctcccttcctgaacaggagtcc
tggagggtgccctctctacctcctgcctctgaggctttccctctgagcaacagctctgcc
agtgccacaagtatgaacgtggtacctctgagagagagaccccagtctcccccttctgga
cccgatgcgggccttatagaaccgcccccttcccctcccaataactctcctggaagactc
atcccagaggcagagagccacagcctggactcacgcattgagatgcttctcagcaagact
cagagttcctgcctccctctacatggtgaaaggggtttggatgctgaagtgcactctcag
gacagccctgtttccccattctcccctgtctcgatgtactctcctgagtctgaccacacc
ccagcccgtagtggatctcctgtgaactgtacccaccccaccaccagtgatggtctggag
gatgtcagtcccacttccctccctgagtgggaaggagacgagtcccttccagggatgcct
tctctaacatggacctcacagcccccctggcctcctgggacgctctctctcactcaaagg
gagagaatttacccatatcccttgaatacgctgcacactgtgcatatggacaaggtgaat
ggtctgcctgggtgtggcagtgtgccagtgtcttttactgggcaaccctggcccctgcct
cccttcatgcccaccttcaacccctctgtgcccccgccaggctacctgcctctgcaggag
gaccctcataaggccacagtggaaaaggtgctggctgtcattacggaggagcttaagtcc
atcgtgaagagagacatcaaccgtaaaatggttgagggggtagccttcagggcgtttgat
gagtggtgggatggccaggagcagaaagctaagattgctgtaagtcttgtgaatgccaga
gagggtagagtggaggtgagggccaaaccaagagactccctaagacagaacattggcccg
cgtggtgccaccaacctgccttccttcaaggtaaagaagaaagagtccgacgaatcgact
gcctcagaggaccccaaaagaaagtgtccctacacacctgttaatgatgcacatgagagt
gctgagctggagagtaatataacgaatcacacattggacaggtccccaaaaactggaact
attccagctgtgaggcgaagacatgcaaggccactggagctggacagtgagggggaagag
gagagcagagagaaagagggggagccaacaagagacaaagaggaggatactgtggaagca
gacaaggttccccaacgccagcagagggatgagaatgatgacagtgaacaaaaagaggaa
gaagtggacgaggatgaagatgatgatgaagatgatgatgaagatgtgttgcttaataaa
tctacttcaataaatctgttacacatactgaaatgcacattattgttttctcatttacca
gaagttgccagggtaagcctctcagaggtagagtcttactcctcagaagacagtgaatac
ctctcagagtctgactcctctgactcctcctttgaggaaagtgaagacttctcagactat
gactccagttctgaccaggagacagaggaagaggaggagacagatggagatgctgatgag
gtcaacagggaggtagagtgtgtggtgttgtcatcagatgaggaggagatggatctggag
cccccggctacaccctcagcccctcttaccccaggcacagagctggacctactggatggg
tcagagccggtcctgagggatcagccttgggaggagaagcactcagtctgtctgactcga
gatgtctttgggcgcaccagctgcacaagccgacctgacccagggatggagctcctgtcc
agtgagcaccaccatgatctccaggccccctcacccataggcctgccaggtagatcagtg
gtggagcctgattttgcagtggagatagatagccctgaatggagcgttgagtcaccagat
aacgtggagaacctccggcctctcacccccactggctctctgggggacagcgactcagac
ctactgttcaagagcaaaccaaccccccctgctgtggaggaggtggaactgccacacact
cctggtcggggagcagaggccctccttgagagtgaggaggactctatggaccacctcctc
tccttttcccgcacagacagtgagcctttgtcccagagccgccccactcatccccctgcc
ttagcctcgtacccaacatacgaggacatgcccaaaacaccagggacagatgagaggggt
ctatggaatccccttaccccctggagggtgccagtgacaccggggagagattcaggcctc
acagagggaggcccggggtttagtcccactccctgtaaccctttcccccttccctccctg
tgcaccggcctttacatcaggaccccacaaactcctgggagggacttcatcccaaccaag
agaacacacaggaataccaccgttatgttggcctcttcacagaggacaaatggtgctcct
ttatcccgtgatgaaatgcttacagactcacctgttttagcttcttctcctagcagcctg
tctgagtcatcagcagagacttctggccatgggtatgtgtggcttaatcctaatcctggg
tcccagaggaagttacccctgcagggcctggagaactggtcagggctggcggatgtggag
aaccagagagagatggaggagtgttcctggaggagggtacaaccaagaatgaggcggaag
atgaggcggaagatgaggcgatggcaaaggatgaggtcagtgcagagagccatgccctct
gtcttctcggccagtccctgtcgtcggtcacgaagtgaggagatgactgtcctccacagt
gtctggaaggagggcctggatgaggaggattccaagctgctgcaggtcacctatgacagg
ctgctacagcaggacaatggcttcagctggctcagtgacactctatgggtcccccaccct
catatcctttactacagagctaagaggaaggagctcaatgattggatgtgggaccatgtg
acaggatctgcccgcagcgagggcttttacaaaatcagcaagaatgacaaaataaaatac
ctcaacagcacgtgtttgaatacagaccagccctctgcagacacccagggggtaggtctt
tcaggccagccgcacccttccctgcggtctgggtctgagttcaggtctgaacaacgccgt
ctgctctcctccttcagctgtgacagtgacctgctcaggtttaaccagcttaagttccgc
aagaagaggattcgtttctgccgcagtcacatccatgactggggcctgtttgccctggag
cccatagcagcagatgagatggtgattgagtatgtgggccagtgcatcagacaggtgatt
gcagatatgcgggagaagcgctatgaagatgaggggattgggagcagctacctgttccgg
gtcgatcaggataccatcatcgatgccactaaatatgggaacttggccagatttatcaac
cacagctgcaatcctaattgctatgcaaaaataatcacagtgaaatcccagaagaagata
gtgatctactcccggcagtccatcagtgtcaatgaggagatcacgtatgattacaagttc
cccatcgaggatgagaagattccctgtctgtgtggagcagagaactgccagggctccctc
aactga
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integrated database retrieval system
