KEGG   Oncorhynchus mykiss (rainbow trout): 110537496
Entry
110537496         CDS       T07259                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin C
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320  PPAR signaling pathway
omy04120  Ubiquitin mediated proteolysis
omy04137  Mitophagy - animal
omy04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110537496 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110537496 (ubb)
   04137 Mitophagy - animal
    110537496 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    110537496 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110537496 (ubb)
Ubiquitin system [BR:omy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110537496 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 110537496
NCBI-ProteinID: XP_021479246
LinkDB
Position
12:34766968..34770882
AA seq 837 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGP
NT seq 2514 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaaaaccctgacaggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccatagag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggtaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccatagagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgctggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctgacaggtaagaccatcaccctcgag
gttgagccaagcgacaccatagagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctgacaggtaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggaccttaa

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