Oncorhynchus mykiss (rainbow trout): 110537496
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Entry
110537496 CDS
T07259
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110537496 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110537496 (ubb)
04137 Mitophagy - animal
110537496 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110537496 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110537496 (ubb)
Ubiquitin system [BR:
omy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110537496 (ubb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
110537496
NCBI-ProteinID:
XP_021479246
LinkDB
All DBs
Position
12:34766968..34770882
Genome browser
AA seq
837 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaaccctgacaggcaagaccatcacccttgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccatagag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgccggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggtaagacc
atcaccctcgaggttgagccaagcgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgag
gttgagccaagcgacaccatagagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaaaaccctgacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagaggctgatc
tttgctggcaagcagctagaagatggccgcaccctctcagactacaacatccagaaagaa
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctg
acaggcaagaccatcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagaggctgatctttgccggcaag
cagctagaagatggccgcaccctctcagactacaacatccagaaagaatccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaaaaccctgacaggcaagacc
atcaccctcgaggttgagccaagcgacaccatagagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagaggctgatctttgccggcaagcagctagaagat
ggccgcaccctctcagactacaacatccagaaagaatccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaaaaccctgacaggtaagaccatcaccctcgag
gttgagccaagcgacaccatagagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatctttgccggcaagcagctagaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaaaaccctgacaggtaagaccatcaccctcgaggttgagccaagc
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagaggctgatctttgccggcaagcagctagaagatggccgcaccctctcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggaccttaa
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