Oncorhynchus nerka (sockeye salmon): 115101985
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Entry
115101985 CDS
T07952
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115101985
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115101985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-Nse
U-box
zf-RING_5
PEHE
DUF4618
zf-RING_6
RE_Alw26IDE
Gpi16
CCDC47
Exonuc_VII_L
End3
Motif
Other DBs
NCBI-GeneID:
115101985
NCBI-ProteinID:
XP_029477309
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All DBs
Position
LG20:2412684..2421587
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AA seq
473 aa
AA seq
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MASKASLSEDDFSCPVCCDIFKDPVVLLCSHSFCKACLEEYWKQKTSWECPVCRKKSSME
FPPCNLVLKNLCEAYLHDRSQRASAGPEVLCSQHSEKLKLFCLEDKQPICLVCQTSKKHK
SHDCCPIDEAVMDHKEELKTSLKPLQEKLKVFGEVKLSCDQTANHIKSQAQHTERLIKMR
FEKLHQFLHEEERARIAELKEEEEQKSQMMKKKIEKMSREISSLSDTIRTIEEELGAEDI
SFLQNYKDTVKRAQCTLPDPERVSGALIDVAKHLGNLQFRVWKKMHGVVHYTPVTLDPNT
SHPHLILSDDLTSVRYSDEKQQLPENPERFDEEETVLGFEGFNSGTHSWDIDVGENMYWY
LGVITESVQRKGDSGYWDGSWGVLFGGGDYKTHVPKQPLTPLIVRQNPQRIRVQLDWEGG
KLSFSDPVNNTHLHTFTHTFTERVLPFICTGFCPLPLRVLPGKVSVSVDTVFV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcttctctctccgaggatgatttctcctgtccagtatgctgtgacatc
ttcaaggatcctgtggtcctgttgtgtagccacagcttctgtaaagcctgtctggaggaa
tactggaaacagaagacatcttgggaatgtccagtctgcagaaaaaaatcatcaatggaa
ttccccccctgcaacctggttttaaagaatctgtgtgaggcctacttacacgatagaagc
cagagagcttcagcagggcctgaggtgctctgcagtcaacacagtgagaaactcaagctc
ttctgtctggaggataaacagcccatctgtttggtgtgtcaaacttccaaaaagcataaa
agtcatgactgctgcccaatagatgaagctgtaatggatcataaggaggaactcaagact
tcactgaagcccttacaggagaaattgaaggtctttggagaagttaaactgagctgtgat
caaacagccaaccacatcaagagccaggcccagcacacagagaggctgattaagatgagg
tttgagaagcttcatcagtttctacatgaggaagagagagccaggatagctgaactgaag
gaggaagaggagcagaagagtcagatgatgaagaagaagattgagaagatgagcagagag
atatcatcactttcagacacaatcagaaccatagaagaagagctgggagctgaggacatc
tcattcctgcagaactacaaggatacagtgaaaagagcccagtgtacactgccagatcca
gagagggtttcaggagcgctgatcgatgtggcaaagcacctgggaaacctgcagttcaga
gtctggaagaagatgcatggagtagttcactacactccagtgactctggaccccaacact
tcccacccacatctcatcctgtctgatgatctgaccagtgtgagatacagtgatgagaaa
cagcagcttcctgaaaacccagagaggtttgatgaggaagaaactgtcctgggttttgag
ggttttaactcaggaacacacagctgggacattgatgttggggagaatatgtactggtac
ctgggtgtgatcacagagtctgtccagaggaagggagacagtggatattgggatggatcc
tggggtgtgttgtttggtggtggtgattataaaacacatgtaccaaagcagccactcact
cccctcatagtgagacagaatccccagaggatcagagtgcagctagactgggaaggagga
aagctgtcattctctgaccctgtcaataacacacatctacacacattcacacacactttc
actgagagagtccttccattcatctgcactggcttttgtcccctccctctcagggtttta
ccagggaaggtgtctgtatcagtggatactgtctttgtctga
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integrated database retrieval system