KEGG   Oncorhynchus nerka (sockeye salmon): 115101985
Entry
115101985         CDS       T07952                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115101985
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    115101985
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-B_box zf-C3HC4_3 zf-RING_2 zf-Nse U-box zf-RING_5 PEHE DUF4618 zf-RING_6 RE_Alw26IDE Gpi16 CCDC47 Exonuc_VII_L End3
Other DBs
NCBI-GeneID: 115101985
NCBI-ProteinID: XP_029477309
LinkDB
Position
LG20:2412684..2421587
AA seq 473 aa
MASKASLSEDDFSCPVCCDIFKDPVVLLCSHSFCKACLEEYWKQKTSWECPVCRKKSSME
FPPCNLVLKNLCEAYLHDRSQRASAGPEVLCSQHSEKLKLFCLEDKQPICLVCQTSKKHK
SHDCCPIDEAVMDHKEELKTSLKPLQEKLKVFGEVKLSCDQTANHIKSQAQHTERLIKMR
FEKLHQFLHEEERARIAELKEEEEQKSQMMKKKIEKMSREISSLSDTIRTIEEELGAEDI
SFLQNYKDTVKRAQCTLPDPERVSGALIDVAKHLGNLQFRVWKKMHGVVHYTPVTLDPNT
SHPHLILSDDLTSVRYSDEKQQLPENPERFDEEETVLGFEGFNSGTHSWDIDVGENMYWY
LGVITESVQRKGDSGYWDGSWGVLFGGGDYKTHVPKQPLTPLIVRQNPQRIRVQLDWEGG
KLSFSDPVNNTHLHTFTHTFTERVLPFICTGFCPLPLRVLPGKVSVSVDTVFV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcctctaaagcttctctctccgaggatgatttctcctgtccagtatgctgtgacatc
ttcaaggatcctgtggtcctgttgtgtagccacagcttctgtaaagcctgtctggaggaa
tactggaaacagaagacatcttgggaatgtccagtctgcagaaaaaaatcatcaatggaa
ttccccccctgcaacctggttttaaagaatctgtgtgaggcctacttacacgatagaagc
cagagagcttcagcagggcctgaggtgctctgcagtcaacacagtgagaaactcaagctc
ttctgtctggaggataaacagcccatctgtttggtgtgtcaaacttccaaaaagcataaa
agtcatgactgctgcccaatagatgaagctgtaatggatcataaggaggaactcaagact
tcactgaagcccttacaggagaaattgaaggtctttggagaagttaaactgagctgtgat
caaacagccaaccacatcaagagccaggcccagcacacagagaggctgattaagatgagg
tttgagaagcttcatcagtttctacatgaggaagagagagccaggatagctgaactgaag
gaggaagaggagcagaagagtcagatgatgaagaagaagattgagaagatgagcagagag
atatcatcactttcagacacaatcagaaccatagaagaagagctgggagctgaggacatc
tcattcctgcagaactacaaggatacagtgaaaagagcccagtgtacactgccagatcca
gagagggtttcaggagcgctgatcgatgtggcaaagcacctgggaaacctgcagttcaga
gtctggaagaagatgcatggagtagttcactacactccagtgactctggaccccaacact
tcccacccacatctcatcctgtctgatgatctgaccagtgtgagatacagtgatgagaaa
cagcagcttcctgaaaacccagagaggtttgatgaggaagaaactgtcctgggttttgag
ggttttaactcaggaacacacagctgggacattgatgttggggagaatatgtactggtac
ctgggtgtgatcacagagtctgtccagaggaagggagacagtggatattgggatggatcc
tggggtgtgttgtttggtggtggtgattataaaacacatgtaccaaagcagccactcact
cccctcatagtgagacagaatccccagaggatcagagtgcagctagactgggaaggagga
aagctgtcattctctgaccctgtcaataacacacatctacacacattcacacacactttc
actgagagagtccttccattcatctgcactggcttttgtcccctccctctcagggtttta
ccagggaaggtgtctgtatcagtggatactgtctttgtctga

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