KEGG   Oncorhynchus nerka (sockeye salmon): 115103110
Entry
115103110         CDS       T07952                                 
Name
(RefSeq) laminin subunit gamma-1-like
  KO
K05635  laminin, gamma 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115103110
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115103110
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Alanine_zipper F420_ligase Death DNApol_Exo
Other DBs
NCBI-GeneID: 115103110
NCBI-ProteinID: XP_029479617
EnsemblRapid: ENSONEG00000028234
LinkDB
Position
LG20:56569308..56638852
AA seq 1594 aa
MGWFIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGQDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKNNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNCNGKSAECYFDSELYRDTGHGGHCRNCADYT
DGPNCERCLDNYYRDTSGTRCLPCSCNPVASLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCESAEGYSIDTVSSTFDRDDEQWTGQQRDSSSVSVQWSTGGEISLISDDYF
PMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSEKSAGYLDDVKLIT
ARRGPGSPARWVEKCTCPQGYVGQHCERCALGYRRSRPDLGPFSSCDSCNCNGHSDTCNP
DTGMCDCLHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGGNGQVRVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDGFFCDRCKEGFYGNPLATNPNDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCVCLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSMSETVSDKAFEDRLKEAEKSIMDLLEEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAENLIGLAREELDKA
KDAISKLDIKAPSISADPNNMTLLAEEARNLAEKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgggttggtttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgtacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggacaggacgaacaacaggccctctgcacagacgagttcagcgacatctcacccctg
actggaggaaacgtcgccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgactgccacagatatcaaagtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcctactactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaatggccatgcgagtgagtgt
gcgaaaaataacggtttcggcaagccggtatgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaatgagtgtctgccgtgcaactgtaatggcaagagtgcagagtgctacttcgac
tctgagctctaccgtgacaccggccacggaggacactgccgcaactgtgccgactacaca
gacgggcccaactgtgagcgctgcctggacaactactacagagacacatctggcacccgc
tgcctgccctgcagctgcaacccagtagcctctctggctactcagtgtgacaacacagga
cgctgcagctgtaaacccggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacgttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacccgcagaaccctcagggttgcactccg
tgcttctgcttccagcattcctctgtctgtgagagcgctgaaggctacagcattgacaca
gtctcctccaccttcgaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccagtggtccactggtggggagatctccctcatctccgatgactacttc
ccaatgtactttgtggctccagagcgattcctgggcaatcagctgctgagctacggccag
aacctcaccctgaacttccgggtggacaggagagacacacgtctctcagccgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cctggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactacccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagaaaagtgctggttaccttgacgatgtgaagctgatcacg
gcgaggagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcaaggc
tacgtgggacaacactgtgaaaggtgcgccctgggatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcaactgtaacggacacagtgacacgtgcaacccc
gacacagggatgtgtgactgcctacacaacacagctgggctcagttgtgagagatgtaaa
gatggttactatggagactccactgtggggagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgtgagctgtgtgatgacggtttcttcggagaccca
ctgggggggaacgggcaggtgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtaggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacggcttcttctgtgaccgttgcaaagagggcttctatggaaacccgctggccacc
aaccccaacgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacaa
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagcgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcgctgtgaacgctgtgaggtcaacttcttcggcttc
ggattgtcaggctgcaaaccgtgcgactgtgaccctgagggctcctcgacagcccagtgt
aaagaagatggccgctgtgtgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccatgtcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagagaaatccatcatggacctactagaagaagctcagaccagcaaagatgtg
gacaaaggcctgctggagcgcctggggaaactgaacagcacactgaccactcagtggaat
cgtttgcagaacatcaggaacaccgtggacaacactggaacccaagccgacaaggcccgc
aaccgggtccgagatgccgagaacctgatcggcctcgcccgcgaggaactggataaggcc
aaggatgccatcagcaaactggacatcaaagcaccctccatcagtgcagatcctaacaac
atgacccttctggcagaggaggctcgcaatctggccgagaaacataaaatggacgcggat
caaattgagaagatcgcaaaagatgccaatgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
ctggacaagctgattgacaagaccgagaaagagtacaacgacttgagggacgatctgcga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaagcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagactttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcatcgcggccaatgagaagaccaagcaggctgagggggcgctaggcaacgca
gctgcagatgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcggacaat
gcgaaggaagcggaggacaacgcccgcaaagccaagagtgcagtcaggaccgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaggggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaatgatgtggccaagagccaggaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaacgacatcaagaacact
ttacctgacggctgcttcaacaccccatccctagagcgaccttaa

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