KEGG   Oncorhynchus nerka (sockeye salmon): 115104258
Entry
115104258         CDS       T07952                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    115104258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115104258
Enzymes [BR:one01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     115104258
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     115104258
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 115104258
NCBI-ProteinID: XP_029481454
EnsemblRapid: ENSONEG00000010571
LinkDB
Position
LG21:24289447..24371971
AA seq 1143 aa
MLLRPTVPGLCAMLQTIYETESCFSSDAVSSREQPLELLPQSQVSAMPSAAVEVKTTLPS
GMQSPVGGSEQGVGGGGGPVDLRTDPRLGPLGGGGGGVDPAMREQQLQHELLLLKQQQEL
QKQLLFAEFQKQHEVLTRQHEVQLQEHLKASLQQQQEILAAKRQQELEQKRKLEQQRHEE
LEKQRLEQQLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFPQKCWGA
HHTSLDPNSPPQSNTPGTPPSYKLPPLLGSYEVRDDFPLRKTASEPNLKVRSRLKQKVAE
RRSSPLLRRKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPN
IHAEQLRSLHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQT
MRQGGALTGKFVSTSSLPASCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQSA
LLSVPMYGQSPLVTGDRVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQH
FLEKQKQYQLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEGAGSELLGEGRPQEQK
LQKEESGETSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPYGQHHLQQLN
VFQASLSISGMPHRPLGRAQSSPATASIKGAPMGEVPIKHLFTTGLVYDTFMLKHQCMCG
NTHIHPEHAGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNR
QKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGE
LKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVSKILIVDWDIHHGNGTQQ
AFYNDPNVLYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYLT
AFRTVVMPIANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFSHLTKQLMKLAGGRVV
LALEGGHDLTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHWS
SLQRLAPTVGQSLMDAQRREKDEADTVTAMASLTVDTEQASASTLSTETSRSTEEPMEEE
PVL
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgcttttaaggcccaccgtgccggggctgtgcgcaatgttgcagactatctatgagacc
gagtcctgcttctcctcagacgccgtgtccagcagggagcaacctctggaactgctgccc
cagtcccaggtgtctgccatgcccagtgctgctgtggaggtgaagacaactctcccctcg
gggatgcagagccctgtgggcggcagtgagcagggtgttggcggtggcggcggtcccgtg
gacctgaggacagatcccaggctgggacccctgggcggaggaggtggaggggtggaccca
gccatgagggagcagcaactgcagcatgaactgctcctcctcaagcagcagcaggagctt
cagaaacagctcctctttgctgagttccagaagcagcatgaggttctgacacgccagcat
gaggttcagctgcaggagcacctgaaggcgtccctgcagcagcagcaggagatcctggcg
gccaagcggcagcaggagctggagcagaagaggaagctggagcagcagaggcatgaagag
ctggagaaacagaggctggagcagcagctcctcatgctacgcaacaaggagaagggcaaa
gagagtgccattgccagtacggaggtgaagctgaagctacaggagttcctcctgagcaaa
aaagagcctggtacacctggcggactaaaccattccttcccccagaaatgctggggggcc
caccacacctctttggaccccaactccccccctcagagtaacactccgggaacgccgccc
tcctacaaactgcccccgctactggggtcctacgaggtcagggatgatttccctctccgg
aagactgcctccgagcccaatctgaaggtgcgttcgcggttaaaacagaaggtagctgag
aggcggagcagtcccctgctgaggaggaaggacgggaccgtgataagcaccttcaaaaag
agagccatcgagatctctgtgtcctccatgtgcagcagtgcccctggctccgggcccagc
tcgcccaacagctccaacagcgccatcgcagagaacggctccagcggctctgtccccaac
attcacgcagagcagctgcggtccctccaccagacccttaacgccgatgggacagtcagt
ccgctgagcctctacacatccccctcgctgcccaacatctccctgggcctaccagccaac
tcgcacctcaccgccaatcagaagctgttgcaggaggcggagaggcaggccatccagacc
atgcgtcagggtggggctctgacgggcaagtttgtcagcacctcgtccctgccggcatca
tgcctgccacctgggatgcaacacgacttagactccacccaggcccccaacagccacagc
agtcattcctccctactgcaacacgtcctcctgctggagcaggcccgccagcagagtgcc
ctcctctcagtccccatgtacggtcagtcgccgttggtgacgggggaccgggtgtccaac
agtatgcgcacggtgaacaagctaccacgccaccggcccctgagccgcacacagtctgca
cccctcccccagagcccccaggccctgcagcagctcgtcatgcagcagcagcaccagcac
ttcctggagaagcagaagcagtaccagctcaacaagattctgtcaaaaggggtggagctt
cctcgccaaccacccacccaccccgaggagactgaggaggagctcacagagacgcaggag
atgcaggaggagggggcagggtctgagcttctgggggaggggcgtcctcaggagcagaag
ctccagaaggaagagtcgggggagacgtcgcccccttcagaacgcctgctgacccccctg
aagggcgagagcacagagagcgacctggaggaagaggatgatgaagacgaggccatcgag
ctgagggagtgtgatgaggagggcgtaccttacggccaacatcacctgcaacagctcaat
gtgttccaggcatccctgtccatttcgggcatgccccacagacctctgggaagggcccag
tcctcccctgccactgccagcatcaagggggctcccatgggtgaggtccccatcaagcac
ctcttcactacagggttggtgtacgacacctttatgctgaagcaccagtgtatgtgtggg
aacacccacatccacccagagcacgccggccgtatccagagtgtgtggtcccggctgcag
gagactgggctcctgggccgctgtgagaggattcgggggaggaaggccacgttggatgag
atccagactgtgcattcagaataccacaccctgctgtatggcaccagtcccctcaacaga
cagaaactagacagcaagaagctcttaggtccaatcagtcagaagatgtatgctgtgttg
ccctgtggaggcattggggtggacagtgacactgtgtggaacgagatgcactcctcgggc
gctgtcagaatggctgttggctgcgtcatcgagctggctttcaaagtggccgccggggaa
ctgaagaacggttttgccgtggtgcgtccaccaggccatcacgctgaggaatccactgcc
atgggcttctgcttcttcaactcagtggccatcacagccaagctgctacagcagaaacta
ggagtgagcaagatcctcatcgtggactgggacattcaccatggtaacgggacacagcag
gctttttacaacgaccccaatgtactttacatttccatgcatcgctacgacgatggaaac
ttcttccccggcagtggggctcctgaagaggtgggggttggacctggtgttggcttcaac
acaaacatcgcttggacggggggcgtagaaccgcccatgggtgacgtggagtacctgact
gccttcaggacggtggtgatgcccatagccaacgagttctcccctgacgtggtcctagtg
tccgctgggtttgatgccgttgagggccaccagtcccctctgggaggatacaacgtcact
gctaaatgtttcagccacctcaccaagcagctgatgaagctggcagggggacgtgtggtc
ctggcgctagaaggaggtcatgacctcacggccatctgtgacgcctccgagtcctgcgtg
gcggccctgctcggcgatgagttggaccccctgccacaggctgtcctgcaacagaagccc
tgtccaaaagctgctgcctctctggagagggtcatcgagatacagagtaaacactggagc
tctctccaaaggttggctcccacggtgggccagtccttaatggatgcccagcggagagag
aaggacgaggccgacacggtcaccgccatggcatcgcttaccgtggatactgagcaggcc
tccgcttccaccctctccacggagaccagcaggtctacagaagagccaatggaagaggag
cctgtcttgtag

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