Oncorhynchus nerka (sockeye salmon): 115105719
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Entry
115105719 CDS
T07952
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115105719
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
115105719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
115105719
NCBI-ProteinID:
XP_029483898
EnsemblRapid:
ENSONEG00000034556
LinkDB
All DBs
Position
LG22:complement(60193651..60215547)
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AA seq
1772 aa
AA seq
DB search
MAEEQCSQIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCTHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHMKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYENTLIAS
ASCDKVIRVWCLRTCAPITVLQSHAASITSIQFCPAVKGPMRFLASTGADGMVCLWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGGTDHVIRVYYLGSETPMKLSELD
AHMDKVVVVQFCNNSNSLRFVSGSRDGTARIWHYQQQEWKSITLDIATRLPGSAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDRRI
MLSAGHDGNIYMWDLAKGAKIRNFFNMIEGQGHGAAFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKEEHLVPQLGYMANGDGEVVEQVIGQLTADEGQGESPLDVLIRQLQNQP
EERRDQEREPEGEGAGERPEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSIYNTERRRKPVPSSPKTEQQAPCKRSLRRT
QRKKKQTRPPPAYQTRSAGERRVNRDRISDSQMDSDSDGEAEEQAEASDASSDGETQWQS
DSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEAGRKQAEEK
KKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQAY
VRAVHRAKAYSINPQKQPWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKMT
NESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGVRFRSIIDDAWWFGSVEDQQPLQAE
YPDSLFQCYAVKWDNSEREKMSPWDMEPISDEAELPEEVGDGVVVTEEEVKARLYSPQEG
EWGAHSRDEDCQRVIFGINDLLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIHRRLE
NRFYRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLRYIGDQSCTDILDLCHK
VKTELSSGEDETAEVDVDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCRELLRRMMD
GPDSEPFRLPVDLFTYPDYRDIIDTPMDLGTVTEALVVGNYENPMEFAKDVRLIFSNSKA
YTPNKKSQIYTMTLSQSAFFERQIISIISDYKSAVQNQRRRSRQSVSYRKRLNSGGSSPP
TSRPSSPKGKHKSGKKATPKKSQPSSKSLSRRPSQASESSSVVVEEDSQPSSSSSSGTGS
HIGGPGADRVTRSRTTPIKNSGITTQERNRPLTNGARQSHRRRVLQEGEESGGSKSSSSS
SSSSSLSSSDSDSDSESEVGKFVEGGDHDYSKAPCLKTRHKAMGKMDVSGKRRRKEEQEA
EEAPERAKRARVQAEDEEEEKDEEDDDEQDEDNEEEEEEEEEEEPQPQPQREEEDDEEEP
EEEEEPEEKEESEDDSEQGEGGTEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDEESGT
TEDPLNLGMSRSGRVRRMTEKARVSHLMGWNH
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaacagtgttcacaaatcgaagctgaattgtattacctcattgccagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatcctggttgaggaactggaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatcccagcagactacctgctgagagtatgccaacagatc
ggtcctctcatagacaaggaggccccacctagcgtccctggagtccagaccctcctgggc
ttgggaaggcagtctttgcttcgcacagctaaaagttgtacccacacagaatggagcgga
actgctgttgctgcgctgcaccggggtcgccccccagaaccaccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgtcaggctactggcactgcccgcttcggc
catgccctgccgtcctacacctaccagcatatgaagatgcacaggcgcatcctgggccac
ctgtcctctgtgtactgtgtggccttcgaccgcagtggcagacggatatttacgggttct
gatgactgtctggtgaagatttggtccacggatgacggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcagtgaactacgagaacacgctcatagcctcg
gccagctgtgacaaggtcatccgagtgtggtgcctgcgcacctgcgctcccatcactgtg
ctgcagagccatgcagcctccatcacctccattcagttttgtccggcggtaaaaggaccg
atgcgcttcctggcctccactggcgcagacggcatggtgtgtttatggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatttccacctcctccttcagctgtggtgggatgttcctggccacgggcggtactgat
catgtgatcagggtgtattacctcggctctgaaacacccatgaagctgtctgagttggat
gctcacatggacaaagttgtggtggtccagttttgtaacaacagtaacagcctgaggttt
gtgagtggcagccgggacggcacggctaggatctggcattaccaacagcaggagtggaag
agcattactctggacatagccaccagactaccagggagtgctgttgtgaatggcgaggac
aagaccaagctggtgccgacgatggtggcctgggaccgcggtgaccgcacggtcgtcaca
gcggtctctaattacctgctcaaagtgtggagctctaccacgggccagctgctgcatgtg
ctgtctggtcatgatgatgaggtgtttgtcttggaggcccacccatttgaccgccgcatc
atgctgtctgctggtcacgatggcaacatctacatgtgggacctcgccaagggagcaaag
atccgcaacttcttcaacatgattgagggccaaggccacggtgcagcgtttgactgtaag
ttctcagctgatggacagcactttgcctgcactgactcccatggccacctgctcatcttt
ggctttggctgcagcagaccctatgagaagattcctgaccagatgttcttccacactgac
ttccggcccctgatccgggacgccaataactttgtcctggacgagcaaacccagcaggcg
ccccacctcatgccccctcccttcttggtggacgtggacggtaacccccaccccacccac
taccagcgcctggtgcccggcagggagagctgcaaggaggaacatctggtgccccagctg
ggctacatggccaatggtgatggtgaggtggtggagcaggtgattggccagctaacagca
gatgagggtcagggagaaagcccattggatgtcctgatcagacagttgcaaaaccagccg
gaagagaggcgggaccaagagagagagcctgaaggagagggggctggtgagagaccagag
gtagtgggatcgccccctaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
cagatgcaccacaacgcccctcgcagtcagatggccacagagagggacctgctggcctgg
agtaggagggttgtggtcaacgaagtccagcaaggggtcctccgggtgatggaagagacc
agacgggccaaaggtgaggtggagtgttccatctacaacacagagaggaggaggaagcct
gtacccagttctcctaagactgagcagcaggctccctgcaagcgctccctgcggcggacc
cagaggaagaagaagcagaccagacctccaccagcgtaccagacccgctcagcaggagaa
cgtcgtgtgaacagggataggatctctgacagccagatggactcggacagcgatggagag
gcagaggagcaggcagaagccagcgacgcttcctctgatggggaaacgcagtggcagagt
gacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcggggatc
aacctccagccccccaagcggaccagcagaaggcaggtccgaccgcccggtggctccagc
agttcagaggaggccgagggccagggagaggaggccggaaggaagcaggcggaggagaag
aagaagaagcccaagcagaccaaacagaagaaacctagctcgtctctgtctctggctggg
tgtgatgcggaggaatggctgcccccctcctggatcatggagaccattccccgccgctct
ccttttgtgccacagatgggtgacgagctgatgtacttcaggcagggccaccaggcctac
gtcagggcagtgcacagggccaaggcctacagtatcaatcctcagaaacagccctggaac
aagctcaacctcagggaccaggagtctgtgaaggtggttggcattaagtatgaggtgggc
cctcccaccctctgttgcctaaaactggccttcctgcaccccatctcaggcaaaatgacc
aatgagtcattctccttaaagtaccatgacatgccggatgtcattgatttcctggtgctc
cagcagttctatgacgaagctaaagagcacaactggcagactggtgtgcgcttccggagt
atcatcgatgacgcctggtggtttggctcggtggaggaccaacagccactccaggcagag
tacccagacagcctgttccagtgctacgctgtcaagtgggataatagcgagagggagaag
atgagcccttgggacatggagcccatttctgatgaagcggagttgccagaagaggttggt
gacggggtggtggtgacagaggaggaggtgaaggctcgcctctacagcccccaggagggg
gagtggggggctcactcacgggacgaggactgccagagggtcatctttggcatcaacgat
ctgcttacactggacctggccaaggcgtttgcttcacctgtggacctgcgggactacccc
ctctactgcactgtggtggcctaccccactgacctcagcaccatccacagacggctggag
aaccgcttctacaggaggatctcggctctgatgtgggaggtgcgctacatcgagcacaac
gcccgcactttcaatgagccccagagccccatcgtggcagcagccaaggtggtgactgat
gtgctcctccgctacatcggggatcagagctgcacagacatcttagatctgtgccacaag
gtgaagactgagctgagcagtggagaggatgagactgctgaggtggacgtggactctgac
actccagggacatccacaggacaacagcgggccaatcccagtcctaaaaagcgtggggtt
gtgttagacgtgcgtgcgtggcggggccaatgtcgggagctgttgcggcgtatgatggac
ggccctgactctgagcccttcagactgcctgtggacctcttcacctacccagactatcga
gacatcatagacactcccatggacctggggactgttacagaggcgctggtcgtcggaaac
tacgagaaccccatggagtttgccaaagacgtccgtctcattttcagcaactccaaagca
tatacacctaacaagaagtcacagatctacaccatgaccctgagccaatcagccttcttt
gagagacaaatcatctccatcatctccgactacaagtctgcagtccagaaccagcggagg
aggagtcgccagagtgtcagctacaggaagaggctgaacagtggaggcagctcccctccc
accagtcgaccctccagtcctaaagggaagcacaagtcggggaagaaagcaacacccaaa
aaatcccaaccctcatctaagagcctgtctcgcaggccatctcaggcgtcggagtcgagc
agcgtggtggtggaagaggacagccagccctcgtcctcctccagctccgggacaggcagc
cacattgggggcccaggggccgaccgtgtcacccgcagtcggaccacacccatcaagaac
tcgggtattactacacaggagcgtaacagacctctcaccaatggtgccagacagagccac
cggcgaagagtgctgcaggagggggaggagtctggaggatccaaaagctcctcttcatcg
tcatcttcctcatcattgtcctcatcagacagtgattcagacagtgagtcggaggttggg
aagttcgtggagggaggagatcacgactacagcaaagctccctgcttaaagacccgccac
aaagccatgggcaagatggacgtttctgggaagaggaggcggaaagaagaacaggaggcg
gaggaggctccagagagagccaagagagcacgagtccaggcagaggatgaggaggaggag
aaggatgaagaagatgacgacgaacaagatgaagacaatgaggaggaggaggaggaagaa
gaggaggaggagccacagccgcaaccgcagagagaggaggaggatgacgaggaggagcct
gaggaggaagaggagcctgaggaaaaggaggaatcggaggacgactctgagcagggtgag
ggtgggacagagggcggtcagaaaagcagtagccgcagtaagtctggtcaggtgaacacc
cggaaccagggccgcaggacggtgttgtacaacgacgagtcagatgaagagtcggggacc
acagaggaccccctcaacctaggcatgtcccgctcaggacgggtacgtcgcatgaccgaa
aaggcccgtgtcagccacctcatgggctggaaccactga
DBGET
integrated database retrieval system
