Oncorhynchus nerka (sockeye salmon): 115106578
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Entry
115106578 CDS
T07952
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115106578 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115106578 (rab11fip3)
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115106578 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
2-thiour_desulf
EF-hand_9
ZapB
Jnk-SapK_ap_N
Motif
Other DBs
NCBI-GeneID:
115106578
NCBI-ProteinID:
XP_029485307
EnsemblRapid:
ENSONEG00000020397
LinkDB
All DBs
Position
LG23:13409895..13455974
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AA seq
1121 aa
AA seq
DB search
MEQTLMSSPLGHSEWDPEGTSSHGFILLDSNKGAIMSQRKGGQTALDFQKVDPDVSLCLE
ELFQENALNLDSLFRTSSYSGGDKILPWEGDQANHSQDVPLDKPLELSPLKDKIEEHNNV
SDSPLPWLLFSKTTDLLRDNSVCEELNSLQDPPVSYTDSVNSHKELITLSEPPSPVKVSD
RTPDTNTEASSLLVDYLSSENFTFSPSPAPSGEVNPQGVSKELLLLSLDEDSGFPPPLQG
GETVSPETGDKGLFLEPVTDLPTVSNSTPEGLPESSFSHNNIHTDCARESPGVQVGSVPL
LDLEVPDCDSSLSLCPTPLESPTCTGASPAEDSEQEHTLATSILTLSEHRGEGDSSLLLN
SSPSIEPPSPKFLSNRDASVLGQLPSGCSSEENGPQDLMEDKIIFDFTKHEGEEEMALDP
CLTSDVLPDEETWDLKPPEAVQGDSVPALQTEQRDGERLADLDLFAGTTGCHKRDSFDCP
VLELNGLSSDSGWTSEQTVETLSLSKMVGSDSMVPIVNQREEDPSPLKAVFDALDQDGDG
FVRIEEFMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGTEPQLYDVHF
SPGDGAVSCSEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVQPEMHEDVETDSGI
EATLHDPEDSSNRFSLSSELNSHTLVTVIGGDEEHFEDFGESNTSELLLDTTEEGTEGEG
DSSHLQTPDQSNCSSLLLSPSTPTTLPASFQSFLREEALDFFCNQCHKQISRLEDLSTRL
NFLEMNSSSKRLSSKKVARHLLQNSSMTLDSMSELSRDILDLADTDITDKVLLLERRVAE
LEKDSEASGEQHARLRQENLQLVHRANALEEQLKEQELRAEDHLHQETRRHKDALTKLER
ERGLELENLQARLQQLDEENSELKSCVPCYRANIERLEEEKRKLEDEVEDVTERMNEELE
TRRKTTDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEARRGRSPSAGLQEYQ
SRTREAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVTASFSESLAAEINSV
SRGELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctctggggcattctgagtgggatccagaaggcaca
agctcccatggattcatcctcttggattcaaacaaaggagccataatgtctcagagaaaa
ggtggtcagacagctttggatttccagaaagttgacccggatgtatctctatgcctggaa
gagcttttccaggagaacgccttaaatttagacagtcttttcaggacctccagttactct
ggtggggacaagattttgccatgggagggagatcaagctaatcattctcaagatgttccc
ctggacaaacctctagagttatcgcctctcaaagacaaaattgaggaacataacaatgta
agtgacagtcctctaccttggctgttattctccaaaaccactgatttgctcagggacaac
tcagtgtgtgaggaactaaattccctgcaagatccacctgtgagttacacagattccgtt
aacagtcacaaggagctgataaccctcagtgaacctccttctcctgtgaaggtttcagat
aggactccagataccaacacagaagcttcctctttgttggtagattacctctcttctgaa
aacttcaccttctcccccagccctgccccttcaggtgaggtgaacccacagggtgtcagt
aaggagcttttactcctgtcactggatgaggacagtggcttccctcctcccttacagggc
ggggagactgtgtcacctgaaaccggggacaaaggtttattcctggaacctgtgactgat
ctacccacagtcagtaacagtacccctgaaggtttacctgagagcagcttctcacacaac
aacatccatactgactgcgctagagaatctccaggggttcaggtgggatctgtgcctttg
ctggatctggaggttcctgactgtgacagcagcctcagcctctgccctactcctcttgag
tcaccaacctgcacgggtgcatcacctgcagaggattcagagcaggaacacactttggct
acttcaatcctgactctatcagagcacagaggtgagggggactcgtccctccttctgaac
tcttcaccatcgattgaacccccgtcgccaaagttcctctcaaacagagatgcttcggtc
cttggtcaactgcccagtggctgcagctctgaggagaatggcccccaagatttgatggaa
gacaaaattatctttgattttaccaaacatgagggagaggaggaaatggctcttgatccg
tgcttgacctcagacgtgctgcccgatgaggaaacgtgggacttgaaaccacctgaggct
gtacagggtgacagtgttcctgccttacaaactgaacagcgcgatggggaaaggttggca
gacttggacctgtttgccggaaccacgggttgtcacaaacgtgatagttttgattgccca
gttctggagttgaatggtttgtcttctgattctggatggactagtgaacaaacagtagag
acgctgtcactctctaaaatggtggggtctgactccatggtccccatagtgaatcagaga
gaggaagacccatcacctctgaaggcagtgtttgacgctctggaccaggatggggatgga
tttgtacgcattgaggagtttatggagtttgctgctgcctatggggctgaccaggtgaag
gatctgaccaagttcctggatccaagtgggctgggggtgatcagcttcgaggacttccat
cgaggaatctcggccatcagcaatggagggacagagccccagctctacgatgtgcacttc
agcccaggggacggagccgtgagctgctcagaggagtacgatgagcaaaacgaggtgacg
gacagtgcatacctgggctcggagagcacttacagcgagtgtgagacgttcaccgacgag
gacacgggagccctggtccagcccgagatgcacgaggatgtggagacggacagcggcatc
gaggccacgctccacgacccagaggacagtagcaacaggttctccctgagctctgagttg
aacagccacaccctggtcacagtgattggcggggatgaggaacattttgaggactttggg
gagagcaacacctcggagctgctgctggacaccactgaggagggaaccgagggagagggg
gactcatcccacctccagacccccgaccagagcaactgctcctccctgctactctctccc
agcacccccactactctccctgccagctttcagagcttcctcagggaggaagcgctggac
tttttctgtaaccaatgtcacaaacaaatctctcgcctggaggacctctccactcgcctc
aatttcctagagatgaatagctccagcaagaggctgtctagcaagaaagtagcacgacac
ctcctccagaacagctccatgacgctggacagcatgagtgagctgtcccgggacatactg
gacctggctgacaccgacatcactgacaaggtgctcctgctggagcgtcgcgtggcggag
ctggagaaggactcggaggctagcggggagcagcacgcgcgcctccgccaggagaacctg
cagctggtgcaccgggccaacgccctggaggagcagctcaaggagcaagagctccgcgct
gaggaccacctgcaccaggagacccgtcgccacaaggacgccctcaccaagctggagcgg
gagaggggcctggagctggagaacctgcaggctaggctgcagcagctggatgaggagaac
agtgagctgaaatcctgtgtgccctgttaccgcgccaacatcgagagactagaggaggag
aagaggaagctggaagacgaggtggaggacgtgacggagcggatgaacgaggagcttgaa
acccggaggaagacgaccgacaagctgacccacgagcgccaccagaaccagaaggaaaag
gagcacacgcaggagctgattgaggacctgcggaagcagttggagcacctgcagttgtac
aagctggaggcagaggctaggagaggacgctctcccagtgccgggctgcaggagtaccag
agccgcacccgcgaggccgagttagagcaggagatccgacgcctcaagcaggacaaccgc
agtctgaaggagcagaacgatgagctgaacggccagatcatcaacctgagcatccaggga
gccaagaacctggtgacggcctccttctccgagtcgctggctgccgagatcaactctgtg
tcccggggagagttgatggaggccatccgcaagcaggaggacgtcaacttccgactacag
gactacatcgaccgcatcatcgtggccatcatggagtccaacccctccatgctggaagtc
aagtag
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