Oncorhynchus nerka (sockeye salmon): 115109202
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Entry
115109202 CDS
T07952
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03420
Nucleotide excision repair
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115109202
09124 Replication and repair
03420 Nucleotide excision repair
115109202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
one03051
]
115109202
03400 DNA repair and recombination proteins [BR:
one03400
]
115109202
Proteasome [BR:
one03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115109202
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
115109202
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_3
Crinkler
Ubiquitin_2
Rad60-SLD_2
UBA_2
CUE
Motif
Other DBs
NCBI-GeneID:
115109202
NCBI-ProteinID:
XP_029489741
LinkDB
All DBs
Position
LG25:9260438..9269029
Genome browser
AA seq
463 aa
AA seq
DB search
MLSITLKTLQQQTFKIEIDPELTVKALKEKIETEKGKDGYPATGQKLIYAGKILNDDIPL
KDYRIDENNFLVVMVTKPKPPATPQISPLAAPASTPASALAPPAVSGLSLSDIARPTSSP
APMEISTLSPTSTPAPASSLTQAVEFFTPPAPAPASIPPAALGTSAAPAAAASSHSEVKP
EGEHPEQPFATPPALSSSSLVDDLSLLEEAASILVTGQAYENLVSEIMSMGYEREQVIAA
LRASYNNPDRAVEYLLMGIPAEADLLPPEAFLHTALANLNPTAPAPAPAPAPATDRAQPP
PAATTGTVSSTQQPPSPGGLTGGLTGGTGGSTGGENPLEFLRNQPQFQQMRQVIQQNPAL
LPALLQQLGRDNPQLLQQITQHQERFVQMLNEPQGGEMVEEGVQSQGAPQTNYIQVTPQE
KEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTFDDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgataacgttgaagactcttcagcagcaaacgtttaaaatagaaatagatcca
gaactaacggtaaaagccctgaaggagaagattgagactgaaaaagggaaggatggctat
ccagccacagggcaaaagttaatctacgcaggcaaaatcttgaatgatgacatacctcta
aaagactacagaattgatgagaacaactttctggtggtcatggttacaaagcccaaacct
ccagctactccacagatttctcccctggcagccccagcctctacccctgcttctgccctt
gcacctcctgctgtttctgggctgtccctctctgacattgcccgacctacctcatcccct
gcccccatggagatctccaccctgtcccctacatccacacctgcccctgcctcaagcctc
acacaagcagtggagttcttcacaccccctgcaccagcccctgcttctattccccctgca
gccctggggacgagtgcagccccagctgcagcagcatcctcccactcagaggtcaagcct
gagggggagcaccctgaacagccctttgctacaccaccagccctctcctcctccagcctt
gttgatgacttaagtctcctggaagaagcagcgtcaatactggtgacaggacaggcatat
gagaatctagtgtctgaaatcatgtctatgggatatgaaagggagcaggttattgcggcg
ctgcgagccagttacaacaacccagacagagccgtggagtacctgctaatggggattcca
gccgaggctgaccttctgccaccggaggcgttcctacacacagctctggccaacctcaac
cccactgcccctgctcctgccccagcccctgctccagccacagatagagcccagccccca
ccagcagccacgacaggcacagtgtcttcaacccagcagcccccctcacctggtgggctg
actggtgggcttactggtggtactggtggaagtactgggggtgagaaccccctggagttt
ttgaggaaccagccacagttccagcagatgagacaggtcatccagcagaacccagctctc
cttcctgccctgctccagcagctaggcagagacaacccccagctgctgcagcaaattacc
cagcaccaggagcggtttgtgcagatgctgaacgagccccaaggaggagagatggtagag
gagggagttcagtcccagggggcgccacagactaactacatccaggtcaccccacaagag
aaggaggccatcgagaggttaaaagccttgggatttccagagggacttgtcattcaagca
tatttcgcatgtgagaagaacgagaatttagctgctaatttcctgctccaacaaacattt
gatgacgagtga
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