Oncorhynchus nerka (sockeye salmon): 115123402
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Entry
115123402 CDS
T07952
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2-like isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115123402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115123402
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
115123402
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115123402
Heterochromatin formation proteins
Other heterochromatin formation proteins
115123402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-SET
MBD
SET
Motif
Other DBs
NCBI-GeneID:
115123402
NCBI-ProteinID:
XP_029508597
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSLLWRWLLVQKSSQFQSLTLTTLRLHCPPNRQEPVSPPSPLRYDGSIIPLSPPYPNRED
LMTPLLPLQLPYQFHTCSQACVPHLPPSAHHFRGHNPLRIPLLCSFQRQCAPTPPLTTGI
ETDCDGTEPDSKGEGSENSEGAELDSEVTARGVVYKAPCGLSLCTPGEVLCFLVATESHG
VLQVDDFTFDPLVQLECLRPPQWRPPGLAERDLSRGSEPTPVELCLQEEGVRPEDFRYRK
ERWPHGCFLSSGPLFTTCCDCTDGCGDAESCACACLTPGGKHYSHQRLSEHVPKGLYECG
PWCGCDRGMCQNRVVQRGLRVRLQVFPTGNKGWGVRCRDDLDRGTFVCTYAGVVLRAGLD
SDEPLPPKRQKADLPSDDEVEVVDEWLAPAGEGRAPAETLEPSPPSSPPDRLHVPVIQRP
RVELSPQIQAVLVGNSLPVQPLTGMEVEEGVEQENGVQKPQLNSQPHMKEVDVKLSVSTS
PKKLGPKQNPMEHLYYRRCHEGGERGKVHKSATPTYLCRTSSLTLMIQTSPSSPSSPAKW
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttttgtggaggtggttattggtgcagaaatcctcacagtttcagtccctgaca
ttgacgaccctcagactccactgcccccccaacagacaggagcccgtatcccctccctca
cccctccgttacgatggctccatcatccccctgtcgcccccctaccccaacagagaggac
ctcatgactcccctgctgcccctccagctcccctaccagttccatacctgcagccaggcc
tgtgtgccccacctgcctccgtccgcacaccacttccggggccacaaccctctcaggatc
ccactactctgctccttccagcggcagtgtgctcccaccccacctctcactactgggatt
gagaccgattgtgatgggactgaaccagactctaagggggagggctctgagaattctgag
ggtgcagagttggactctgaggtcacggcgcggggtgttgtttacaaggctccctgtggg
ctgagtctctgcaccccaggggaggtgctatgttttctggttgccacagagagtcacggc
gttctgcaggtggacgacttcacctttgaccccctggtgcagttggagtgtctgcggcca
ccgcaatggcgcccacccgggctggctgagagggacctgagccgggggtcagagccaacg
ccggtggagttgtgcctgcaggaggaaggagtgcggccggaggacttccgctacaggaag
gagcgttggcctcacggctgtttcctcagttcgggcccgctgttcaccacctgctgcgac
tgcactgacggctgtggtgatgcggagagctgcgcctgcgcttgtctgaccccaggcggc
aaacactactcccaccagaggctgtctgagcatgtgcccaaagggctgtacgaatgcggt
ccttggtgtggatgtgaccgtggtatgtgccagaaccgtgtggttcagcggggtctgcgt
gtccggctgcaggtcttccccaccggaaacaaaggatggggggtgcgttgccgtgacgac
ctggacaggggcacgttcgtgtgcacatacgcaggtgtagttctcagggcaggactggac
tccgatgagcccctcccacccaagcgccagaaggcggaccttccctccgacgacgaggtg
gaggtggtagatgagtggctggcgccggcaggggagggacgagcacctgcagagaccctg
gagccctcgcccccctcctcacctcctgacaggcttcatgtgcccgttatccagaggccc
agggtggagctttctccacagatacaagccgtgttggtgggaaactccctgccagtccaa
cctctcacaggcatggaggttgaggagggtgtggagcaagagaatggggtacagaagcca
cagctgaattcccaaccacacatgaaagaagtggatgtgaagctgtctgtgtccacaagc
cccaaaaaacttggcccaaagcagaaccctatggagcacctgtattaccgtagatgccac
gaaggaggggaacgtgggaaggttcataaatctgcgaccccaacctatttgtgcagaacg
tcttcactgactctcatgatccaaacttccccgtcatcgccttcttcaccagcaaagtgg
tga
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