Oncorhynchus nerka (sockeye salmon): 115123646
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Entry
115123646 CDS
T07952
Symbol
vav2
Name
(RefSeq) guanine nucleotide exchange factor VAV2 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115123646 (vav2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115123646 (vav2)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
PH
C1_1
SH2_2
C1_2
PH_10
CDC24
PLU-1
Nup88
Motif
Other DBs
NCBI-GeneID:
115123646
NCBI-ProteinID:
XP_029508860
EnsemblRapid:
ENSONEG00000001931
LinkDB
All DBs
Position
LG4:22552070..22784174
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AA seq
889 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
AQIKGIRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPPDMES
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFVDFKERLLIYGQYCSHMENAQKILDE
LIATREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPERQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDMKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKDTNCR
ACKMLLRGIFYQGYYCSHCGTGAHKECLECITICKINPLDTEPGLPPSGPKMVAVRNYHG
TPVPPGKPPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQSSRETDYYAYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSRERGPAS
RASTRSPGEPIPAAIGASYNFSFLSPQGLNFSSSQSSAPFWSVFTPRVVSTAVARYNFAA
RDMRELSLREGDIVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtggcggcaatgcgggcgatggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcggccgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccaaatgttgcacaacctctcaccggggtctgtggacctaaaggagatc
aacttcagaccccaaatgtcacagtttctgtgtctgaagaacatccggacattcctcaag
gtgtgccacgacaagtttggcctgcggaacagtgaactgtttgaccccttcgacctgttt
gatgtcagggacttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatc
gcacagatcaaggggatcaggccctttccttcagaggacactgctctaaatgaggatgac
gtgtaccggagtcttgaggagctagcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggacgatggagatgacatctacgaggacatcatcaaggtggaa
gttcgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgatccctttgaagcaagttctcagtccaccagacatggagtcc
atctttgtaaatctcgaggatgtgattaaagtccactttgccctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaagatcttcgtagacttcaaggaaaga
ttgttgatctacggccagtactgcagccacatggagaatgcccagaagatactggatgag
ctcatcgccacgcgggaggacgttaagatgaaagtcgaggagtgcactatgaaggtgcaa
gagggcaagttcaagctccaggacctgctggtagtgcccatgcagcgggttctcaagtac
cacctcctacttaaggagctggtgagtcattcaactgaccgacctgagagacagcagctc
aaggaggcgttggaggccatgcaggacctggctatgtacatcaatgaagtgaagagagac
aatgaaaccttgaagaagattagtgaattccagaactccatcgaaaaccttcagcaggtc
aaactggaggagtatggcaggccaaagatagatggagagctcaaggtgtcctccatagtc
aaccggacaaagcaggaccggtacatattcctgtttgataaagtggtcatagtgtgcaag
cggaaaggctactgctatgaactgaaggagatcattgagctgcagtcgtacaaaatgtct
gacgaccccatgaacaacagggacatgaagaagtcgagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaagggaagcagggtttccagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gcaacggccaatcagcacaacttccagatgcacacgtttgagaaggacaccaactgccga
gcctgcaagatgctgctgagggggatattctaccaggggtattactgttcccattgtggg
actggagcgcacaaagagtgtctagagtgcatcaccatctgtaaaataaatccactcgac
acagaacctggactaccaccatcgggtcccaaaatggtggcagtgaggaactatcacggg
acgcctgttcctccagggaagcctccactctccttccagacaggcgacttcatcgagctg
ctgaagggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagtcctcaagggaaacagactactatgcatacccatggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtgggacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaatgatgaa
gtaaagcacattaaagtcattgagaaagacagctggatccacattactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgacattacgatatccctacaaatctagagaacgggggccggcttcg
cgggccagcactcgctctccaggtgagccaatccctgcagccattggtgcttcctacaac
ttctccttcctcagtcctcagggtctcaacttctcctcctctcagagctcagcccccttc
tggtcagttttcacaccgagggtggtcagcacagcggtggccaggtacaattttgcagca
cgggacatgagggagctgtcactcagagaaggagacattgtcaagatctacagcaagatc
ggaggagaccagggctggtggaagggagaggccaatggcaggattggctggtttccttca
acatatgttgacgaagaaggagttcagtga
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