KEGG   Oncorhynchus nerka (sockeye salmon): 115137333
Entry
115137333         CDS       T07952                                 
Name
(RefSeq) pleiotropic regulator 1-like
  KO
K12862  pleiotropic regulator 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115137333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115137333
   03400 DNA repair and recombination proteins [BR:one03400]
    115137333
Spliceosome [BR:one03041]
 Complex B
  Other components
   Prp19 complex
    115137333
 Complex C
   Prp19-CDC5 complex
    115137333
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115137333
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 WDR54
Other DBs
NCBI-GeneID: 115137333
NCBI-ProteinID: XP_029529476
EnsemblRapid: ENSONEG00000001795
LinkDB
Position
LG11:38243217..38251610
AA seq 513 aa
MTEDVQKHSVHTLVFRSLKRTHDMFVADHAKPVSLDETSHKVKMAAKLRADYSAVLHMPI
LKEGKDRPLGSNMPANQNYAQPGDDPEYLITGTHAYPSGPGVALTADTQIHRNPSEGGVH
AMALALPPSQARLDASRTAAGVGDIHRTAGGAERSPAPHSHAMSLLEGGGTKNSSLVARK
APTMPKPQWHAPWKLFRVISGHLGWVRSIAVEPGNQWFVTGAGDRTIKIWDLASGKLKLS
LTGHISTVRGVAVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTID
VLVTCSRDATARVWDIRSKANVHTLSGHTNTVATVRCQAAEPQIITGSHDSTIRLWDLIA
GKTRATLTNHKKSVRALALHPRQYTLASGSADNIKQWTFPDGNFIQNLSGHNAIINAMAV
NSDGVLVSGADNGTIHLWDWRTGYNFQRIHAAVQPGSLDSESGIFACMFDHSESRLITAE
ADKTIKVYKEDDTATEESHPINWKPEILKRKRF
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgactgaggatgtgcaaaagcactctgtgcacacgctcgtgttcaggtccctcaagaga
actcatgatatgtttgtggctgaccatgccaaaccagtctccttggatgaaacaagtcac
aaggtgaagatggcagcgaagctcagggcagactacagtgccgttctacacatgcccatt
ctgaaagagggcaaggacagaccactgggctccaacatgcctgccaatcagaactatgcc
caacctggtgatgatccagagtacttgatcactgggacacacgcatacccctcaggacct
ggggtggctctgacggcggacactcagatacataggaaccccagtgaggggggagttcac
gccatggctcttgccctgccgccatcacaagccaggctggacgccagtcgcacagcagct
ggcgtcggggacattcacagaaccgcagggggggccgagaggtctcctgctcctcactca
cacgctatgtctcttttggaaggaggcggcaccaagaactcgtccctcgttgccagaaaa
gctcccactatgcccaagccccagtggcacgctccatggaagctgtttcgggtcatcagt
ggtcatcttggctgggtgaggtccattgccgtagagcccggcaaccagtggtttgtgaca
ggcgctggcgacagaaccattaagatctgggacctagccagtgggaagctaaagctctcc
ctgacgggacacatcagcacagtgcgcggcgtggccgtgagcacccggagcccctacctg
ttctcctgcggcgaggacaagcaggtcaagtgctgggatctggagtacaacaaggttatc
aggcactaccacggccacctcagcgccgtgtacgacttggacctgcacccaaccatcgac
gtgctggtcacatgcagccgagatgccacagccagggtgtgggatatcaggagcaaagcc
aacgtgcacaccctgtccggacacaccaacacagtggccacagtcagatgccaggccgcc
gaaccgcagatcatcacagggagccacgactctaccatcaggctatgggatctgatagct
gggaagaccagagccactctcaccaatcacaagaagtctgtcagagcactggccctacat
cccagacagtataccttagcctctggctctgccgacaacatcaagcagtggacgttccca
gacggcaacttcatccagaacctctctggacacaacgccatcatcaacgcaatggcggtc
aactcagacggcgtgctggtatcaggagctgacaacggcaccattcacctgtgggactgg
cggaccggctacaacttccagcgtatccacgccgccgtgcagcccggctcactggacagc
gaatcggggatcttcgcctgcatgttcgaccactcggagagcaggctgatcacggccgag
gccgacaagaccatcaaggtgtacaaagaggacgacaccgcgaccgaggaaagccaccca
atcaactggaaaccggaaatcctcaagaggaaaagattctag

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