Oncorhynchus nerka (sockeye salmon): 115146423
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Entry
115146423 CDS
T07952
Name
(RefSeq) lysine-specific histone demethylase 1A-like isoform X1
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115146423
Enzymes [BR:
one01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
115146423
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
115146423
REST complex
115146423
Histone demethylases
115146423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
FAD_oxidored
Pyr_redox_3
FAD_binding_3
Thi4
Lycopene_cycl
2-Hacid_dh_C
NAD_binding_9
GIDA
MurD-like_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
115146423
NCBI-ProteinID:
XP_029544338
EnsemblRapid:
ENSONEG00000002898
LinkDB
All DBs
Position
LG18:40805325..40830639
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AA seq
859 aa
AA seq
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MDITRCPEKWVKQDKERPLSSSIMLSSKKSDAGTSSSASSSSSAAGGAERAPEAQATAQA
GAPASAPGPMEIKKKERASPSGEPGGPPLPHPPGLGGVDPDTAEGRRTSRRKRSKQVEYR
EMDESLANLSEDEYYSEEERNAKAEKERKQVIPPPAPPVEEEPDSEPEEPSGECVEGAAF
QSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATAQQLE
APYNSDTVLVHRIHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGGGVSGLAAARQLQS
FGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQK
CPLYEANGQAGERCTSVPKEKDEMVEQEFNRLLEATSYLSHQLDFNFLNNKPVSLGQALE
VVIQLQEKHVKDEQIEHWKKIVKTQEDLKELLNKMVGTKERVKELHQQHKEASEVKPPRD
ITAEFLVKSKHRDLTALCKEYDELVESQVKLEEKLQELEANPPSDVYLSSRDRQILDWHF
ANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQV
RYTASGCEVIAVNTRSTTQTFIYKCDAVLCTLPLGVMKQQPPAVQFVPPLPEWKTAAIQR
MGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALMAGEAAG
IMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVTRWRADPWARGSYSYVAAGSSGNDY
DLMAQPITPGPAIPGASQPVPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAM
YTLPRQATPTAAPQPSPSV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatattaccaggtgcccggagaaatgggtaaaacaagacaaggagagacctctgtct
tcctccattatgctgtcgagtaagaagtcggatgcaggtacctcttcttccgcatcttcc
tcctcctcggcggcagggggagctgaacgggcccctgaagcccaggctactgcccaggct
ggggcccctgcttcagcaccaggccccatggagatcaagaagaaagagcgggcctcccca
agcggggagcctggcggacccccgctgccccaccctcccggcctcgggggtgtggacccg
gacacggccgagggccgcaggacaagccgtcgcaagcgatcaaaacaggtggagtaccgc
gagatggacgaaagcctggccaatctgtctgaggacgaatactactctgaggaggagcgc
aacgccaaggcagagaaagagagaaagcaggtgatcccaccgccggctccgcctgtggag
gaggagccggacagcgagcctgaggagccttctggtgagtgcgtggagggagctgcgttc
cagagccgcctcccacatgaccgcatgacctcccaggaggccgcctgcttcccggacatc
atcagcgggccccagcagacacagaaagtgttcctgtacatccgcaaccgcacgctccaa
ctttggctcgataacccgaaaatccagctgaccttcgaagccacagcacagcaacttgaa
gcgccatacaacagtgatacagtgctggtgcacaggatacacagttacctggagagacac
ggcctcatcaactttggcatctacaagagagtcaagcctttaccaacgaagaagactggg
aaggtgatcatcatcggagggggtgtgtctgggctggcagccgcgcggcagctgcagagc
ttcggcatggacgtgaccgtactggaggccagggaccgcgttggggggagagtggccacc
ttccggaagggcaactatgtggctgatctgggggccatggtggtgacaggactgggaggg
aatcccatggcagtggtcagtaagcaggtcaacatggagctggccaagattaaacagaag
tgtcctctgtacgaagccaacggtcaagctggcgaacgatgcacaagtgtgcccaaggag
aaggatgagatggtggagcaggagtttaaccgtctgctggaggccacctcctacctcagc
caccagctggacttcaacttccttaacaacaagcctgtgtctctgggacaggccctggag
gtggtcattcagttgcaggagaaacatgtgaaagatgagcagatagaacactggaagaag
atagtcaagacccaagaggatctcaaggagctgttgaacaagatggtgggtaccaaggag
agggtcaaagagctgcatcagcagcacaaggaggccagcgaggtcaagcccccaagagac
atcaccgctgagttcctggtcaagagcaagcaccgcgacctgaccgcactctgcaaggag
tatgatgagctggtggagtcgcaggtcaaactggaggagaagctccaggagctagaggcc
aacccacccagtgacgtgtacctgtcgtcccgggacagacagatcctcgactggcacttt
gccaacctggagttcgccaatgccacacccctctccaccctctcgctcaagcactgggac
caggacgacgactttgagttcacaggcagccacctgacagtgaggaacggctactcctgt
gtccctgtggctctggccgagggcctggacatcaaactgaacactgcagtacggcaggtc
cggtacacagcctccggctgtgaggtgatagcagtcaacacgcgctccaccacccagacg
ttcatatacaagtgtgacgcggtgctgtgcaccctacccctgggagtcatgaaacaacag
ccccccgccgtgcagtttgtcccccccctgcccgagtggaagaccgcagctatccagagg
atgggctttggaaacctcaacaaggtggtgctgtgttttgaccgtgtgttctgggacccc
agtgtgaacctatttggccatgtgggcagcactacagccagcaggggagaactcttcctc
ttctggaacctttacaaagcccccatactgctggcgctgatggccggggaggcggccggc
atcatggagaacatcagcgacgacgtcattgtcggacgctgccttgccatcctcaaaggt
atcttcggaagcagcgctgtacctcagcccaaggaaacggtggtgacgcgttggcgtgcc
gacccctgggcacggggctcctactcgtacgtggcggccggttcctccggtaacgactat
gacctcatggcccagcccatcacccccggtcccgccatccccggagcgtcacagcccgtc
ccacgtctgttcttcgccggcgagcacacgatccgcaactacccggccacggtgcacggc
gctttgctcagcggcctgcgagaggcaggacgcatcgccgaccagttcctgggcgccatg
tacaccctcccccgacaagccacgccgactgccgcccctcagccctcccccagtgtctag
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