Oscillatoria nigro-viridis: Osc7112_6563
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Entry
Osc7112_6563 CDS
T02375
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03030
DNA replication
oni03430
Mismatch repair
oni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Osc7112_6563
03430 Mismatch repair
Osc7112_6563
03440 Homologous recombination
Osc7112_6563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oni03032
]
Osc7112_6563
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_6563
Enzymes [BR:
oni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Osc7112_6563
DNA replication proteins [BR:
oni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Osc7112_6563
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Osc7112_6563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AFZ10695
UniProt:
K9VU00
LinkDB
All DBs
Position
pOSC7112.02:89231..90733
Genome browser
AA seq
500 aa
AA seq
DB search
MAKSRLTGTPPKEENLERIVKKKRSTATAHNSAKTVKKSVKATTETDSVCEPLTISPQKV
ETSQTCTNFAALPAVEALSLETLSNEAILPSPSTLPSAIELACDSRELNDYIQALKGIIP
SNSSHPILSNILIEADAETQHLHLTAYNLEFGMQVSFGANVNQSGKLTLPAPILADILGK
FPNGSLTLKSSCEIIKGSDVPSVSATLSASRSKHAIRGLAADEFPAIPSVQQKLVTLPAS
VLISVLKASLFAVSSEENKRILTGGNFQLSRDADRGLDQLRVWTTDGHRVAMVLGLNESS
NSHLLSSQIVNFTVPAKVLRLLERSLNSTDKVTIYYEGLPEQPSNFVAFEWNNWRLTTKL
LEGQYPICDQIIAPYRHQFSHQVVVERLSFLKALERLASHSDKSHLTAILEFDLDAQQVR
ASLNNTLSSGTETVDAKLWGCEFRLKCDIRYLIDTAKAISSSDLRVLMATPTAPLLIAPF
GTPASGTEAKECEYIVAPQE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctcgactaacaggaacaccgcctaaagaggaaaatttggagagaatagtt
aagaaaaaacgctcgactgccacagcacataattctgccaaaacagtgaagaaatcagtc
aaagcaacaactgaaactgactcggtttgcgaacccttaacaatctctccacaaaaagta
gaaacctcgcaaacttgcacaaattttgcagcacttccagccgtcgaagctctttctcta
gaaacattgtcaaatgaggcgatattgccttccccttctactctcccatcagctattgaa
cttgcctgcgattcaagagaattaaacgattatatacaagccctgaaaggcatcattccc
agcaatagcagccatcccattttgtccaatattttgattgaagctgatgctgaaactcaa
catttgcatctgactgcttacaacttagaatttggaatgcaagtgagctttggtgcgaat
gtcaatcaatctggaaagcttaccctccccgcacccatacttgctgacattttgggaaaa
tttcctaacggcagcctcaccttaaagagttcttgtgaaattattaaaggaagcgacgtt
ccatcagtcagtgccactctgagtgcgtcaagaagcaagcacgccattcgcgggctagct
gcggacgaatttccggctatccccagcgttcaacagaaacttgtaacgcttcctgctagc
gtgttaatttctgtcctcaaagctagcttatttgctgttagttccgaggaaaataaacgc
attttaactggaggtaattttcaactcagccgcgacgcagacagaggactcgatcaactg
agagtttggacgacagacgggcatcgggtagcaatggttttaggattgaacgaaagcagc
aattcccaccttttgagcagtcaaatagttaattttactgtccctgctaaggtactccgg
ttattggagcgttctttgaattccactgacaaagttacgatttactatgaaggtttgcca
gagcaacctagcaattttgtcgcattcgagtggaataattggcggttgaccacgaagttg
ctagaagggcaatatccaatttgtgaccaaattatcgctccctatcgacatcaatttagc
catcaagtggtggttgagaggctgagctttttaaaagccttagagaggttagcttctcac
agcgacaagtctcacctaacagctattttagaattcgatttagatgcccaacaagtgcga
gcatcactcaacaatactctcagttcaggaacggagacagttgatgccaaactatggggc
tgtgagtttcgtctcaagtgcgacatccgctatttgattgatacagccaaagcgatttcc
agctcagatttgcgggtgttaatggcaactcctaccgctcccctactgattgcaccgttt
ggaacgcctgcgtcgggtacagaggctaaggagtgcgaatatattgtcgctccgcaagaa
tag
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