Oreochromis niloticus (Nile tilapia): 100690072
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Entry
100690072 CDS
T06104
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03410
Base excision repair
onl04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100690072 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100690072 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100690072 (parp4)
03036 Chromosome and associated proteins [BR:
onl03036
]
100690072 (parp4)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100690072 (parp4)
Enzymes [BR:
onl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
100690072 (parp4)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100690072 (parp4)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100690072 (parp4)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100690072 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
BRCT
VWA_CoxE
PARP_reg
TniB
Motif
Other DBs
NCBI-GeneID:
100690072
NCBI-ProteinID:
XP_013120857
Ensembl:
ENSONIG00000010261
LinkDB
All DBs
Position
LG16:35099886..35145371
Genome browser
AA seq
1917 aa
AA seq
DB search
MAVFDSCSVLFELKGLSFKEKKKVKSAVTDHGGNLSFVVNKQCSLVVTTDVSNLSSNRLR
SIQKYHTPVVGVDYVYRCVERGVLLQVDEYKLDTSSASSGPLHRSSFKMAPLASLAPQQI
GSKGQAQPMECVSGTQRAESLERSGNVLDRFRIYRETDSDLPSDQSDFQVAKYSIFEKVN
SNSWCVLELQSFKGEEGRQYRVVRYWKDDVLCEKKAVRDKLVFLSTSEEALEVFQALRDS
LEASGLRKQSRFPPSAREMGSAPLQQLLLEEKLNTGSLSQEVGVFVELLWTEALGCLDNI
LRVSVDKLSLNDVSRAEGLLLQAQKKLTEGNHAEPISLLQEFYTLLPHRQSSMFPSTKLI
SQKLDLCQLIRDVLNASEMTLRSPAPSTVGKYRALRCSVETVPPSSSEFQAVTDLLQDSR
VQIQQIVRVGRGVELQTFKSELENVKPLLHSSSPNNFVGILSRGLLLPHVGVEHHGIERT
DFGKLGGGIYFSDSLSTSLKYSKPSVTDGSRLLLVCDVALGRCREVYKTDILLKQAPDGY
DSVRGVRRTPNTPSEFEDDEYVVYSPDQVKLKYVVQFSIQGDQLKDFTPSMNMSPELCLP
CSAEELSLGDDMFESSKNPLEEVTAGLLDSTGQQLPLQAVHVKCKLMDLLSQVIIFQKYT
NLSSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGQVKEKEKARKEYKQAIEKGHGAYLM
DQDAPDVFTISVGNLPPGATVLIKVTFVSELIVRDGTILFSLPGSVAPWQESAALNQTTQ
VTVEKVCVTDEAASVREFTLDLSAEMPYEISSLQCITHQIKMKKTDCKAVVSVLPGQIMG
PDGFQLSIMLSDVHLPRMWVEKHPDKDSQACMLVFYPDFEVSSSSDADEVILLLDTSESM
KGESLRSARRIALQILKSLDRSLRLNVVLFGTDHTEAFLTVMPLGEVYEEAQRFIKQHSA
PLGGGTEMWRPLRALSLLPPSRGIRNLLLLSDGHIQNTELTLKLLRDNAQHSRLFTCGLS
PMANRHMLRALAQAGGGAYEFFDTKTKHNWAEKVACQLKRMASSGCSSVSVKWQQFSPTS
PPLQAPKQLHALFNDCHTLVYGFVPHCTQATLLGNLRGQELKTMVSTSELQKTKGTFLHK
LTARALIRDYEDGNLDTSEAEHEGKKAELKSFIIELSKEFSILSQFTSFVAIEERDSEQP
QPGFTDIPKLIAEEDVDFLPYINWISPEDDEDLIEEESSEEDADCGFGLFDSCDSFTTPD
FSPPAPHTTYFKEHASLYSISGHSAPPPPPPSMKRASDDVPHLSFSAPPAPPPHPFSMHH
ALADVPQCLISTPMGPSSGSLMERVSEVVPQPPQTLSSSLSSFRRDYPCNTSIDSFSSDS
QAVGHINIPLPEIYRAQMGPISRNSLTLDSSRSSLPIHGYSSAMENQLHSALDSVSDEPE
QSSSECVEGVSYMVPPAIENYGSELERGDFMSLKYKYRRTARHSSFSPVSCSFDFKVREQ
LPETSAPSDLEHQPEPHLQMPLFGQAGKTIELKSGVFPVKSYLPPKLYHLSTDGSLPDTA
PAAVPSQLVVESDDTHEATSLSVARTPIGPSFGSAKFTSSGVHSKLGSSSSTYDGALGST
VVPVTSAPSDLEHQPKPGLCLKSLRRIRGTSCYLPPTLSNNDVPVGPRMAPEMAAQFHYR
GFTPSYGLPKVEICSASQPHHEPEGPSSAPQLPVRASVLQRRPVPASFSAGHQNLPTNPF
LHHQSAVLNAAESPEVLKLKWMKIFQMQHSEGYWELTTELGELINVNVDLFANVFLKDKG
IHSLGVTAHADILRLVATLLVLQLMKANKLEEGKLLRTLFCLEEASQSRPERWEQVKKAV
DWVCWADRQYPCVYSRLEFGLSWESATRQLLGYESLPPFSPLCGLDLQRTTAPVLVQ
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgttcgacagctgctcggtgctgttcgaactcaaaggtttgtcgttcaaggag
aagaagaaagtgaaatcagcagtcacagatcatggaggcaacctttcgtttgtggtcaac
aaacagtgctctttggtagtgacaaccgatgtatccaacctaagctccaacaggctgcgt
agcattcagaaataccacacacctgtggtcggggtggattatgtgtacaggtgtgtggag
agaggagttctcctgcaggtagatgaatacaagctggacacgtcctctgcctcatcaggt
cctcttcatcgctcttccttcaagatggctccactggcttcactcgcacctcagcagata
gggtcaaaaggccaggcccaacctatggagtgtgtcagtgggactcagagggcagagagt
cttgagaggagtgggaatgtgctggacaggttcagaatttatagagaaactgattcggat
cttccgtcagaccaaagtgactttcaagtggcaaagtattcaatctttgaaaaggtaaac
agcaacagttggtgtgtgctggagctgcagagcttcaaaggggaggaggggcggcagtac
cgtgtggtcagatactggaaggatgatgtactctgtgagaagaaggccgtgagggacaag
ctggtgtttttgtccacctcagaggaagctctggaggtgttccaggccctgagagacagc
ctggaggcttcaggtctccggaagcagagcaggtttcctccttctgcccgtgagatgggc
tctgcgcccctccagcagctgctcctggaagagaagctcaacacaggaagcttatcacaa
gaagtgggtgtatttgtggagctgctgtggactgaggcgctgggctgcctcgacaacatc
ctcagagtttcagttgacaagctcagcctgaatgatgtgagcagggcagaaggcttgttg
cttcaggctcagaagaagctgacagagggaaaccacgctgagccgatcagtctcctgcag
gagttctacactctgctgccacacagacaatcctccatgtttcccagcaccaagctcatc
tctcagaaactggacctctgtcagttaatccgagatgttctgaatgcaagcgagatgact
ctgaggagccccgccccttccactgtggggaagtatcgagctctgaggtgcagcgttgag
acggttccccccagtagctccgagtttcaggctgtgaccgatctcctgcaggacagcagg
gtgcagatccagcagattgtgcgtgtcggccgaggggtggagcttcagacctttaagagc
gagctggagaatgttaagccactcctccattcctccagtcccaacaactttgtgggaatc
ctgtctcgtggcctgctgttgccccatgtgggagtcgagcaccacgggatagaaagaacg
gatttcgggaaactgggtggtggaatctactttagtgattccctgagcaccagtctgaaa
tactccaagcccagcgtgacagacggctcccggttgttgttggtgtgtgatgttgcgttg
ggacgttgcagggaggtctacaagacggacatcctgctgaagcaggctcccgatggatac
gacagcgtgcgcggagtccgccgcactccaaacactccctctgagtttgaggatgatgag
tatgtggtatacagtcctgatcaggtgaaactcaagtatgtggttcagttcagcatccaa
ggagaccagctaaaggacttcactccttccatgaacatgtcacctgagctctgtcttcct
tgttctgctgaagagctcagtttaggcgatgatatgtttgaaagcagtaaaaaccctctg
gaagaggtgaccgccggactgttggacagcactggtcagcagctccctctgcaggccgtt
catgtgaagtgtaaactgatggatctgctttcgcaggtcatcatcttccagaaatacaca
aatctgagctcagtgcccattgaggcaaagtatgttttccctctagatgattcagctgca
gtgtgtgggttcgaagctttcatcaacgggaagcatgtcgtgggacaggtgaaggagaaa
gaaaaagctcgcaaggagtacaaacaggctattgagaaaggacatggagcttatctcatg
gaccaggatgcacctgatgtgttcaccatcagtgtgggtaacctgccccctggtgcaact
gtcctcatcaaagtgacctttgtctctgagctgattgtcagggacggcacaattctcttc
tccctgcccggcagcgtggctccatggcaggagagtgcagccctcaaccagaccacacag
gtcactgtggagaaggtgtgcgtaactgatgaagctgcgagtgtcagagagttcaccttg
gacctgtcagctgaaatgccctatgagatctccagcctgcaatgtatcactcatcaaatc
aagatgaagaaaaccgactgtaaggcagtggtgagtgtgctgccgggacagatcatgggt
ccagatggatttcagctgtccatcatgctgtctgacgtccacctgcccaggatgtgggtg
gagaaacaccctgacaaggacagccaggcctgcatgttggttttctatccagactttgag
gtcagctccagttcagatgcagatgaagtcatcctgctgttggacacatccgagtccatg
aagggagagtctctccgctcggcccgcagaattgccctgcagattctcaaaagcctggat
cgcagcctgagactcaatgtcgttttgtttggaacagatcacacagaagctttcctaaca
gtgatgccacttggtgaagtttatgaagaagcccagagattcatcaagcagcactcggct
ccattagggggaggcactgagatgtggcgtcccctgcgagcgctcagcctgctgcctcca
tcgcgcggcatcaggaacctgctgctgctgtcggacggccacatccagaacaccgagctc
accttgaagctgctcagagacaatgctcagcacagtcgcctcttcacctgtggcctcagc
ccgatggccaaccgacacatgctgagggccttggctcaagcagggggcggagcctatgag
ttcttcgacacaaaaaccaaacacaactgggcagagaaggtggcctgtcagctgaagcgt
atggcatcttctggctgcagttcagtgtctgtcaagtggcagcagttcagcccaacaagt
ccacctctgcaggctcccaagcagctgcatgctctgttcaatgactgtcacactctggtt
tatggctttgtgccacactgtactcaggctactctcctgggaaatctgagaggtcaggag
ctcaaaacaatggtgtcaaccagcgagctgcagaaaacaaagggcacatttcttcacaag
ctcaccgcgagggccctcatcagggattatgaagacgggaacctggacaccagtgaagct
gaacacgagggtaagaaagcagagttgaagtccttcatcatcgagttaagcaaagaattt
tccatcctgtctcagtttaccagctttgtggccattgaggaacgggactcagagcaacca
cagcctggttttacagacatccccaagttgattgcagaggaagatgtggacttccttccc
tacattaactggatttctcccgaggatgatgaagacctaatagaggaagagtcttcggag
gaggatgctgattgcggctttggtttgtttgactcttgtgattcattcacgactcccgac
ttctctcctccagctccacatacaacttattttaaggagcatgcttcactatattcaatt
tctggacactcggctccccctccacctcctccttctatgaagcgtgcttcagacgatgtt
ccccacctttctttttctgcacccccagctccccctccccatcctttttctatgcaccac
gctttagcggatgttccacagtgtttaatttctacacccatgggtccctcttctggttcc
cttatggagcgtgtttcagaggttgttccacaaccccctcaaaccctctcgtccagcctt
tcttcatttcgtcgtgattatccttgtaatacttccatagattcgttttcatcagacagt
caggcagtggggcacatcaatattccacttccagagatctatagggctcagatggggccc
atttcacgtaacagtctcacactggacagcagcagatcatcactcccaattcatggttac
tcttcagcaatggaaaatcaattgcacagtgcacttgattctgtgtctgatgagccagaa
cagagttcatctgagtgtgttgaaggcgtttcttacatggttccacctgctatagaaaac
tatggctctgagcttgagagaggagactttatgtctttaaaatacaaatacagaagaaca
gcaagacattcgtctttcagcccagtttcttgtagttttgactttaaagttagagaacaa
cttcctgagacgtcagctccatcagatttagagcaccaaccagaacctcacctccaaatg
ccattatttggtcaggcagggaaaacaatcgagttaaagagtggagtctttcctgtgaag
tcctatttacctcccaaattgtaccacctcagcacagatgggagtcttcctgacactgct
cctgcagcagtaccgtctcagttggttgttgaatctgatgacacacatgaagcaacttct
ctgtctgttgcgcggactcccatagggccgtcttttgggtcagctaagtttacttccagt
ggcgttcactctaaattaggtagctcaagctccacctatgatggtgctctgggttctaca
gtggttcctgtgacgtcagctccatcagatttagagcaccaaccaaaacctggcttgtgc
ttaaaatcattaaggcggataaggggaacctcttgttatttacctcccaccctttccaac
aatgatgttcctgtaggccctagaatggctcctgagatggccgctcagtttcattacaga
ggatttactccctcttatggtttacccaaagttgaaatttgcagtgcatcacaacctcac
catgaacctgaaggtccgagcagtgcaccacaacttcctgtaagagcaagtgttctacaa
agaaggcctgtcccagcatctttctccgctggccatcagaatctcccaactaaccctttc
ctgcatcatcagtcagctgtactgaatgcagcagaatctcctgaagtgctgaagctcaaa
tggatgaagatcttccagatgcaacattcagaagggtactgggaactaaccacagaactg
ggggaactaattaatgtcaacgtggacctgtttgccaacgtgttcctgaaggacaaaggc
atccattctctcggcgtgacagcccacgcagatatcctgaggctggtggcgactcttctg
gttctgcagctgatgaaagcgaacaaattggaagaaggcaaactgctccgcaccctgttc
tgtctggaagaagcttctcagtccaggccggaacgatgggagcaggtgaagaaggcggtg
gactgggtttgctgggctgaccgacagtatccctgtgtctatagtcggctagagtttggt
ttgagctgggagtccgccacccgtcagctactgggttatgaaagcctccctcccttctcg
cctctctgtggtctggatctacagaggacaacggccccagtactggtccagtga
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integrated database retrieval system
