Oreochromis niloticus (Nile tilapia): 100695316
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Entry
100695316 CDS
T06104
Symbol
virma
Name
(RefSeq) protein virilizer homolog isoform X4
KO
K22910
protein virilizer
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100695316 (virma)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100695316 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
100695316
NCBI-ProteinID:
XP_005472790
Ensembl:
ENSONIG00000006070
LinkDB
All DBs
Position
LG11:complement(20060568..20076960)
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AA seq
1878 aa
AA seq
DB search
MAGDPSTELLFLDTFKHQSAELTNIDVVRFPCGVLITEVRVIPPGIKAHSNLPDSRAFGE
TSPHAFQLELFFNNVTKPNSPTFHRLGSLEYDENKSIVFRPSGKVNTDGLVLRGWYTTLT
VAVYGTAERPHGHDQDSPPPPPPPPPQQPSGLKRILKQEWEKDDQYNGSPPRPAPRGPRT
PPGPPPPDDDDEEQVQMTVGEAKEEPTEGRDDYLENVSPERSLPADETYSDAEQEEEAEE
EEEEEEQEEEEDTRTEGSAPEEEDEEEEEEDEDNDGYEQISSDEDDLDNGSFKLQNFDMD
YTPEDLASVPPVQYDPYERELRPLLYFTPPYKTRFDIQFEKATVEEPKEAGGAEGPAGGE
EAEAVAQLKELLASIGDDRDARWVSALEEAPGLLAKGLAYLVKRGEGEIEDSVRVLVQWT
LQALSMEVALKQPIALNLRQLKAGAKLPSYLAECPQGLTMLLHEGVLNVLLELLHADHVS
STLKLSILRALDALISAPAGVEAFLHAGNSEKSGYQRLVQLFLREETVRVITAGNAILQK
SHMYEVLVDLQHAAAALSEPQQEEMDDAESPMEEEPSLSSTALSEAELDRLAGALEELHH
LLETAPHCMVQPPGKAFPTTARITGPQERDNPYPSLYRYMHACHFLESTTVVLSAAAAAG
HLGVTQAVRELLRFLSLTQSGLLFLLAQPTPTNLLLRLLASMAESEAEESMCTGGEAGLI
GPGCGEEGFGVWLIQALHALQGVSELMSHVATGGDGGAGLDEGDNPDILGTLHALYLMTF
TQTGRSAVAHVFSLDNNLSCLVTLLQHHSKDGQGEGKARKAVTYNYACMLVLLVVQNSNE
LRMMEQYAAPLLSIAKADDTNAKLQELSKWLEPVEKLRFEIGSIPTLIDYIKQNVENVLT
AEGTGLVTALRVLCHIACPPPAVEGQQRDLKWSLAGVQLFSGEGLDTCVRVLQKLCSVLL
QPWRVHGHMGPTPQRCMILSICISTLRLLRTMLTELLRGGAFQFRDTRVASVLVTLHMIV
CSIPASGRLDGEETRVQVLIVDVLLTFTQGVNEEVTHTEETLASNTWSLMLKEVLSSLLK
APEGLFSGLTLLSELLPLPLPMHSTQVISVQDVAVALNTRKLWSMHIRAQWKVFSEAFRC
VCTTTCPPLLAILRRVCVQLADLSSPTATHIMKTLLELLLEELQPAEGKTVSWGQVLRLL
SLMDTLVSQRACKSATLHLLSGSVSGDEQLADLFPLLLSLLVPPTDHSIHQQQCSVLVGT
ILQSLCDQDISLVVSPPGESCVSEAEQLANALPGREMMSSVCSSLLEVLGNAESSVPLLL
TCIRTLTFLTEHDYGLYHLKVALKKHGAGLCSLLKRLVLSFNKDSADLLSALLDFLRQIL
HTEPICAEEGHGSSEDPAFVPPRLLSGSEMKALLQWEESESHPLPALEKQIAKLCKDDDS
LETMLENVIALRQTLQAATDTPPAADTEPTLPAPETLGAQFNHRTVFILSEALDEQLKAL
WFSPFQTDDIETDLDMVKVDLVGLAQECCPELDLKAELERSFLSEPSSPGHTKPTKGFRL
GKHKHETFITSSGKSDYVEPAKRAHIMAAPRGRGGRGGFGQNVSRPHDIFRLRKQNTSRP
PSMHVDDFVAAEFKDITTPLGLLPPKRPPKSAPKPPTRGLFTGNRGRATFHSQTRFFTPP
QPKGVLLSGNYTRREGGRGSSWSGQVPAVTHRGTYSEPRGGQSNFTRGPLPSRQSPASVI
GGKKSLIHSFHTSGAYRLALRDRAPRGRGGTGLSWISGGGGGGGAGGGAGEAVEGEEDLR
GASSAVEEGAEVGGADMFAPSPGKSTWTMTAASHGNKRANQDIIYAVSMETWWYDVVTNN
VQTVLMFSVLLLLAVFRK
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggacccttcaacggagcttctttttctggatacgtttaagcatcagagtgca
gagttaaccaacatagacgtggtgcgctttccctgcggggtgctgatcacagaggtgcgg
gtcattcctccagggatcaaagctcacagtaaccttcctgacagcagagcgtttggagag
acttctcctcatgccttccagttggagctgttcttcaataatgttaccaaacccaacagc
cccaccttccacagactgggcagtttggaatatgatgaaaacaagtccattgtgttcaga
cccagcggaaaggtgaatacagatggcctagtgttgcgtggctggtacacgactctgact
gtggcggtgtacgggacagcggagcggccacatggacacgaccaagactcgcctcctccc
cctccaccaccaccccctcaacagcccagcgggctcaagaggatccttaaacaagagtgg
gaaaaagatgaccagtacaatggcagcccaccaagaccagcacccagagggcctcggacc
ccacctggtcctccacccccggatgatgatgatgaggagcaggttcaaatgacggtgggc
gaggccaaggaagagccgaccgagggccgtgacgactacctggagaacgtgtcgcctgaa
agatcgctgcccgctgacgagacgtactcagatgctgaacaagaagaagaggccgaggag
gaggaggaagaggaggagcaggaggaggaagaagatacacggactgaggggagcgcgccg
gaggaggaggacgaagaagaggaggaggaggatgaggataatgatggctatgaacagatt
tccagtgatgaggacgatctggataatggcagcttcaagttgcagaactttgacatggac
tacactcctgaggatcttgcatctgttccaccggtccagtacgacccatatgaacgagaa
ctccgacccttgctctacttcacgcctccatacaagactcgctttgatatacagtttgag
aaggccactgtggaggagcccaaggaggcaggtggagcagaaggaccagcaggcggagag
gaagctgaggctgtggctcagctgaaagaacttttagctagtattggtgatgacagagat
gcacgctgggtcagtgctctggaagaggctcctggacttctggccaaagggttggcttat
ttagttaaaaggggagagggcgagatagaggactctgttagagttttagtccagtggact
ctccaagctctcagtatggaggttgctctcaaacagcccattgcccttaacctcagacag
ctgaaggctggtgctaagctgccttcatacctggcagagtgtcctcagggtctcacgatg
ctgctgcatgaaggggttctgaatgtgctgctggagctgctccatgcagaccatgtctcc
tccacactgaagctgagtatcctaagagctttggatgctctgatcagcgctcctgcaggg
gtggaggctttcctacatgcaggaaattcagagaagagtggctaccagcgtctagtccag
ctgttcctgcgtgaggaaacggtgcgggtcataacagctggaaatgccatattacagaag
agccacatgtatgaggtgctggttgacctacagcatgcagcagctgcattgagtgaacca
cagcaggaggagatggatgatgcagagagccctatggaagaggagccttcgttaagctcc
accgctctgagtgaggcagagctcgataggttggcgggtgctttggaagagctacatcac
cttctagaaacagcccctcattgcatggtgcaacctcctgggaaagccttccccactact
gctagaattacggggccacaggagagggacaacccctacccatcactgtataggtatatg
catgcatgtcattttctggagagcacaacagtggtgttgtcagcagctgctgcagccggc
catcttggggtcactcaagccgtcagagagctcctgcgcttcctgtcgctcacccagtca
gggctgctcttccttctcgcccagcccacacccaccaacctgctgctgcgcctcctggcg
tcgatggcagagtctgaggcagaggagagcatgtgtactgggggagaagcgggtctgatt
gggccagggtgcggtgaagagggctttggcgtgtggctgatacaggccctacatgctctg
caaggcgtgtcagaactcatgagccatgtggccacaggaggagacggtggtgcaggccta
gatgaaggtgacaatccagatatactgggcacactccatgcgctttacctgatgaccttt
acgcagactggacgcagcgcagtagcccatgttttcagcctggataacaacctttcctgt
ctggtcacgctgctccagcaccacagcaaggacggacagggtgagggaaaggctcgcaaa
gcggtgacatataactacgcctgcatgctggtcttactggtggtgcagaattctaatgag
ctgcggatgatggaacaatatgccgctccgctgctctctatagccaaggctgatgacacc
aatgccaagttacaggagctcagtaaatggttggagccagtggagaagcttcgctttgag
attggcagcattcccacccttatcgactatatcaaacagaatgtagaaaacgtgttaact
gctgagggaaccgggctggttactgctctgagggtcctctgtcacatcgcctgcccacct
cctgctgtagaaggtcagcagagggatctgaagtggagccttgcaggagtccagcttttc
tctggggagggtctcgatacgtgtgtgcgtgtcctgcagaagctatgcagcgtgttactg
cagccgtggcgcgtgcacgggcacatgggtccgacgccgcagcgctgcatgatcctcagt
atatgtatcagcacgctccggttgctccgcaccatgctcaccgagctgctgcgcggcgga
gctttccagttcagggacactcgcgtggccagcgtgttggtgacgcttcacatgatagtg
tgctccattcctgcttctgggcgtctcgatggggaggagaccagagtgcaagtgctcatt
gttgacgtcctgctcacctttacgcagggtgttaatgaggaggtgacccatacagaagag
actctggccagcaacacgtggtctctgatgctaaaggaggttttgagctcacttctcaaa
gctcctgaaggccttttctctggtctgacgctgctgtctgagcttctgcctcttccactg
ccaatgcatagcactcaggtgatatcagtccaagatgtggctgtagccttaaacacaagg
aagctgtggagcatgcacattcgtgcacagtggaaagtgttttccgaggcgttcagatgt
gtgtgcaccaccacctgccctcctctcctggccatactcaggagagtgtgcgttcagctg
gcagacctgtcttcacccactgcaacacacatcatgaagaccctgctggagctcctgctg
gaggagctgcagccggcagaggggaaaaccgtctcctggggccaggtcctgcggcttctt
tctttgatggatactctggtgtctcagagagcctgtaagagtgcaacactgcatctgctg
tccgggtcagtttctggagatgaacagctggccgacctgttccccttgttgttgtctctg
ttggttcctccaacggatcactccatacatcagcagcagtgcagtgtactagtggggaca
atattacagtcactgtgtgaccaggacatttctctcgtggtgtctccacctggtgaaagc
tgtgtgtcagaggctgagcagctggccaatgcacttccgggacgagagatgatgtcatcg
gtgtgcagttctctgttggaggttttggggaacgcagagagcagcgtgcccctcctcctc
acctgcatcaggactttgacattcctcacagagcacgactacggactctaccacctcaaa
gttgctctgaagaaacatggcgctgggctgtgctcgctgctgaagaggctggtgctgtcc
ttcaacaaagactcagcagatctgctctcagctctgctcgactttctcaggcagatcctc
cacacagaaccaatatgtgctgaagagggtcacggctcgagcgaggatcctgcttttgtt
cctccacggttgctgtcgggctctgaaatgaaagctctgctccagtgggaggagtcggag
tcacatccactacctgctttggaaaaacagatagcgaaactatgtaaagatgacgattcc
ttggagaccatgttggagaacgtgattgctctgaggcagacgttgcaggcggccacagac
acacctcctgcagctgacaccgagcccactctgccagcaccagaaacactcggggcccag
tttaatcacaggacggttttcattctgtctgaagctctggatgagcagctgaaggctctg
tggttctctccgttccagactgatgacattgaaacagaccttgatatggtgaaggtggat
ctggtgggtctggctcaggagtgttgtccagaactggacctgaaggcagagctggagcgc
tccttcttgtctgagccgtcctctccgggtcacacaaaacctacgaaaggcttccggctg
ggcaaacacaaacatgagacattcattacgtctagcgggaagtctgactacgttgagcct
gcaaagagagctcacatcatggctgctcctcgtggccgaggaggtcgaggagggtttggg
cagaatgtctcccgaccgcacgatatcttccgcctgcgcaaacagaatacttcccgtcct
ccaagcatgcacgtggatgactttgttgcagcggagtttaaagacattacgacccctcta
gggcttctgcctcctaagcgacctccaaagagcgcccccaaaccccccaccagagggcta
ttcactggtaacagaggcagagctactttccacagccagactcgctttttcactccacca
cagcctaaaggtgtactgctgtcaggaaactacactcggagagaaggaggccgagggtca
tcgtggagcggtcaggttccagctgttactcacagagggacctacagtgaaccccgcgga
ggacagagcaacttcactcgaggaccactgccttctcggcaatcccctgcaagtgttata
gggggaaaaaaaagtttgattcactcgttccacacttcaggtgcgtatcggctggctctt
cgggatcgagctccacgcggcagaggaggtaccggcctgtcttggattagcggcggagga
ggtggcggcggtgctgggggaggtgccggggaggcggtggagggggaagaggatctcagg
ggagcaagttcagcggtggaggagggagcggaggtgggaggggcagacatgttcgctcct
tcaccaggtaaatccacctggacaatgactgcagcctctcacggcaacaaaagggccaat
caggatattatatatgctgtctccatggaaacgtggtggtatgatgttgtcacaaataat
gtacagactgtgttgatgttttcagttttgttattattagctgtattcagaaaataa
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